Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622502
Identifier: 84622502
GI number: 84622502
Start: 922381
End: 922908
Strand: Direct
Name: 84622502
Synonym: XOO_0845
Alternate gene names: NA
Gene position: 922381-922908 (Clockwise)
Preceding gene: 84622501
Following gene: 84622503
Centisome position: 18.67
GC content: 48.67
Gene sequence:
>528_bases ATGTCAGCAAAGCGAATCGAGAGATTTTCGGTAAACGCTCTGAACTGGAAATCAATTTCAGGGCTCGTGGTTCTCACACT TGCAGTAATGGTTTCTATTGCGCTGACGGTAGGTCAAGGGCAATGGGCGCTATCACTTGCGATTGCTGTGGTTGTGTTTG CATTAATCGCATCGTTACTTGCTACAGCCAGAATCGATATTATTGAGGGCATGCTTGTTGCTGGTGGCGGCTTTTATAAG GTGAAGGTGCCGCTGGATCGAATTCATGTGGCTCATGCACGCATCCTTCTACCCGATGATCCTTTTCGCCTGAGTTGGAG GAAAAACGGATTAGGCTGGCCAGGACTGAATTTGGGATGGTTCTCTTCGAAAGGCCCTAAGCGGGTTTTCGCAGTCGACA CCCGTAAAGCAGATCGAGTCTATGTCCCGACTTTCGAAGACTTCGACATTGTTCTAACACCGACAGATCCCTGTGCTTTC CTCAATGCGCTTGGAAAGGCATGTGCTCGAAACGATCAAGCAGGATAA
Upstream 100 bases:
>100_bases CTGCTGGGCTGTCCGTCCATACGTTGCGCTAACAGCAGGTCTCTCGAGGTGTTGCACTTGACTCTTGAGACCGCCCCTAC AAAGCTGTCGGAGTTTGAAC
Downstream 100 bases:
>100_bases CTTAACAGACAGTGGGCGGTTCAGCCCTTGGATGCAGTCCGCGCGTCAGGGCAATTAGGTCCCGGCGGCGCTTGGTTCAT GGCCTGCTAGAATGCTGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MSAKRIERFSVNALNWKSISGLVVLTLAVMVSIALTVGQGQWALSLAIAVVVFALIASLLATARIDIIEGMLVAGGGFYK VKVPLDRIHVAHARILLPDDPFRLSWRKNGLGWPGLNLGWFSSKGPKRVFAVDTRKADRVYVPTFEDFDIVLTPTDPCAF LNALGKACARNDQAG
Sequences:
>Translated_175_residues MSAKRIERFSVNALNWKSISGLVVLTLAVMVSIALTVGQGQWALSLAIAVVVFALIASLLATARIDIIEGMLVAGGGFYK VKVPLDRIHVAHARILLPDDPFRLSWRKNGLGWPGLNLGWFSSKGPKRVFAVDTRKADRVYVPTFEDFDIVLTPTDPCAF LNALGKACARNDQAG >Mature_174_residues SAKRIERFSVNALNWKSISGLVVLTLAVMVSIALTVGQGQWALSLAIAVVVFALIASLLATARIDIIEGMLVAGGGFYKV KVPLDRIHVAHARILLPDDPFRLSWRKNGLGWPGLNLGWFSSKGPKRVFAVDTRKADRVYVPTFEDFDIVLTPTDPCAFL NALGKACARNDQAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19006; Mature: 18874
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAKRIERFSVNALNWKSISGLVVLTLAVMVSIALTVGQGQWALSLAIAVVVFALIASLL CCCCHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH ATARIDIIEGMLVAGGGFYKVKVPLDRIHVAHARILLPDDPFRLSWRKNGLGWPGLNLGW HHHHHHHHHCEEEECCCEEEEEECHHHEEEEHEEEEECCCCEEEEEECCCCCCCCCCCCC FSSKGPKRVFAVDTRKADRVYVPTFEDFDIVLTPTDPCAFLNALGKACARNDQAG CCCCCCCEEEEEECCCCCEEECCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SAKRIERFSVNALNWKSISGLVVLTLAVMVSIALTVGQGQWALSLAIAVVVFALIASLL CCCHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH ATARIDIIEGMLVAGGGFYKVKVPLDRIHVAHARILLPDDPFRLSWRKNGLGWPGLNLGW HHHHHHHHHCEEEECCCEEEEEECHHHEEEEHEEEEECCCCEEEEEECCCCCCCCCCCCC FSSKGPKRVFAVDTRKADRVYVPTFEDFDIVLTPTDPCAFLNALGKACARNDQAG CCCCCCCEEEEEECCCCCEEECCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA