Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is hflK [H]
Identifier: 84622494
GI number: 84622494
Start: 911308
End: 912435
Strand: Direct
Name: hflK [H]
Synonym: XOO_0837
Alternate gene names: 84622494
Gene position: 911308-912435 (Clockwise)
Preceding gene: 84622493
Following gene: 84622495
Centisome position: 18.45
GC content: 65.96
Gene sequence:
>1128_bases ATGGCCTGGAACACACCCGGCAACAAGGGCGGAGACGGCCCGGATCCCAACCGTCGCAGGTCCTGGGGGCCGCGCGGCGG TGGCAACGGTGGCGGTTGGGGCAATCTGCCCGCCCCGTTGAAAGAGCTGTTCGATGGCGGCGTGGGGCGCTGGATCCTGA TCGCGGTGGTGCTGATGGTGCTGTTCTCCAGCTTCCAGCTCATCGGCGAGCAGCAGCGTGGTGTGGTGCTGCGCTTCGGC CAGTTCTCGCGCATCCTGCAGCCTGGCCCGAACTTCAAGCTGCCCTGGCCGATCGAGTCGGTGCGCAAGGTCAATGCTAC CGAGATCAAGACCTTCAGCAACCAGGTGCCGGTGCTGACGCGCGACGAGAACATCGTCAACGTCTCGCTCAACGTGCAGT ACCAGATCAGCGACCCGCGCAAATACCTGTTCGGCTCGCGGAATGCCGATCTGGTGCTGGAGCAGGCCGCGCAGAGTGCC GTGCGTGAGCAGGTGGGGCGTTCGGACCTCAACACCGTGCTCAACAATCGCGGCCCACTGGCGATCGCTTCAAAGGACCG TCTGCAGGCGGCGCTGGATGCTTACAACACCGGCCTGGCCGTTACCGGCGTGACCCTGCCGGATGCCCGCCCGCCGGAAG AAGTGAAGCCGGCCTTCGACGAGGTCAATGGTGCCCAGCAGGTGCGCGAGCGCCTGATCAACGAAGCCCAGGCTTACGCC GCCAAGGTAGTGCCTGAGGCGCGCGGCCAGGGTGCCCGCACTCGCACCGGTGCCGAAGGCTACAAGCAGGCCACCATCTC CAAGGCCGAAGGCGATGCCGACCGCTTCACGCTGTTGCAGGCGCAGTACGTCGGCGCGCCGGAGGTCACCCGCAAGCGTC TGTGGCTGGAAACCGTGCAGAAGGTGCTGTCGGAGAACCGCAAGGTGATCGGCAGCGATGGCCGCCAGGTCATCTACGTA CCGCTGCCGGCCGACGCCAGCAAGCCGGCCACTGCCAGCGGCAACGCCGGTATGCCGTCGATGGTGCCGCAGGACGTGTT GTTGAATCCGCCGCAAAACACCAGCAGCGAGGCCATCCGTAACCCGGAACGCGGCCCACGCCTAACTGGCCGTGAGGGAA CCGAATAA
Upstream 100 bases:
>100_bases TCAAAACGGCCGGTCTGCCCCATCTAGTAGAATCGGCGAATCAAACAACATGGCGGCACTGCGGGACTGGCCCGCACAGC CCCTCGATCATGGAGCGTGC
Downstream 100 bases:
>100_bases TGAAGAATTCGCTAGTGATCGGCCTGATCGTCGCCGTGCTGCTGACCCTGATGGGCTCGGTGTTCGTGGTGCGCGAAGAC CAGACCGCCATGGTGCTCAA
Product: integral membrane protease subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MAWNTPGNKGGDGPDPNRRRSWGPRGGGNGGGWGNLPAPLKELFDGGVGRWILIAVVLMVLFSSFQLIGEQQRGVVLRFG QFSRILQPGPNFKLPWPIESVRKVNATEIKTFSNQVPVLTRDENIVNVSLNVQYQISDPRKYLFGSRNADLVLEQAAQSA VREQVGRSDLNTVLNNRGPLAIASKDRLQAALDAYNTGLAVTGVTLPDARPPEEVKPAFDEVNGAQQVRERLINEAQAYA AKVVPEARGQGARTRTGAEGYKQATISKAEGDADRFTLLQAQYVGAPEVTRKRLWLETVQKVLSENRKVIGSDGRQVIYV PLPADASKPATASGNAGMPSMVPQDVLLNPPQNTSSEAIRNPERGPRLTGREGTE
Sequences:
>Translated_375_residues MAWNTPGNKGGDGPDPNRRRSWGPRGGGNGGGWGNLPAPLKELFDGGVGRWILIAVVLMVLFSSFQLIGEQQRGVVLRFG QFSRILQPGPNFKLPWPIESVRKVNATEIKTFSNQVPVLTRDENIVNVSLNVQYQISDPRKYLFGSRNADLVLEQAAQSA VREQVGRSDLNTVLNNRGPLAIASKDRLQAALDAYNTGLAVTGVTLPDARPPEEVKPAFDEVNGAQQVRERLINEAQAYA AKVVPEARGQGARTRTGAEGYKQATISKAEGDADRFTLLQAQYVGAPEVTRKRLWLETVQKVLSENRKVIGSDGRQVIYV PLPADASKPATASGNAGMPSMVPQDVLLNPPQNTSSEAIRNPERGPRLTGREGTE >Mature_374_residues AWNTPGNKGGDGPDPNRRRSWGPRGGGNGGGWGNLPAPLKELFDGGVGRWILIAVVLMVLFSSFQLIGEQQRGVVLRFGQ FSRILQPGPNFKLPWPIESVRKVNATEIKTFSNQVPVLTRDENIVNVSLNVQYQISDPRKYLFGSRNADLVLEQAAQSAV REQVGRSDLNTVLNNRGPLAIASKDRLQAALDAYNTGLAVTGVTLPDARPPEEVKPAFDEVNGAQQVRERLINEAQAYAA KVVPEARGQGARTRTGAEGYKQATISKAEGDADRFTLLQAQYVGAPEVTRKRLWLETVQKVLSENRKVIGSDGRQVIYVP LPADASKPATASGNAGMPSMVPQDVLLNPPQNTSSEAIRNPERGPRLTGREGTE
Specific function: HflC and HflK could encode or regulate a protease [H]
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family. HflK subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790616, Length=362, Percent_Identity=35.3591160220994, Blast_Score=194, Evalue=6e-51, Organism=Escherichia coli, GI1790617, Length=328, Percent_Identity=23.1707317073171, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1786697, Length=283, Percent_Identity=22.2614840989399, Blast_Score=67, Evalue=2e-12, Organism=Drosophila melanogaster, GI45550506, Length=218, Percent_Identity=25.2293577981651, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI281365664, Length=183, Percent_Identity=28.9617486338798, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI24657857, Length=183, Percent_Identity=28.9617486338798, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR010201 - InterPro: IPR020980 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7; PF12221 HflK_N [H]
EC number: NA
Molecular weight: Translated: 40705; Mature: 40574
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWNTPGNKGGDGPDPNRRRSWGPRGGGNGGGWGNLPAPLKELFDGGVGRWILIAVVLMV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHH LFSSFQLIGEQQRGVVLRFGQFSRILQPGPNFKLPWPIESVRKVNATEIKTFSNQVPVLT HHHHHHHHCCCCCCEEEEECHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHCCCCCEEE RDENIVNVSLNVQYQISDPRKYLFGSRNADLVLEQAAQSAVREQVGRSDLNTVLNNRGPL CCCCEEEEEEEEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCE AIASKDRLQAALDAYNTGLAVTGVTLPDARPPEEVKPAFDEVNGAQQVRERLINEAQAYA EEECHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH AKVVPEARGQGARTRTGAEGYKQATISKAEGDADRFTLLQAQYVGAPEVTRKRLWLETVQ HHHCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHEEEEHHHHCCCHHHHHHHHHHHHHH KVLSENRKVIGSDGRQVIYVPLPADASKPATASGNAGMPSMVPQDVLLNPPQNTSSEAIR HHHHCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHC NPERGPRLTGREGTE CCCCCCCCCCCCCCC >Mature Secondary Structure AWNTPGNKGGDGPDPNRRRSWGPRGGGNGGGWGNLPAPLKELFDGGVGRWILIAVVLMV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHH LFSSFQLIGEQQRGVVLRFGQFSRILQPGPNFKLPWPIESVRKVNATEIKTFSNQVPVLT HHHHHHHHCCCCCCEEEEECHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHCCCCCEEE RDENIVNVSLNVQYQISDPRKYLFGSRNADLVLEQAAQSAVREQVGRSDLNTVLNNRGPL CCCCEEEEEEEEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCE AIASKDRLQAALDAYNTGLAVTGVTLPDARPPEEVKPAFDEVNGAQQVRERLINEAQAYA EEECHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH AKVVPEARGQGARTRTGAEGYKQATISKAEGDADRFTLLQAQYVGAPEVTRKRLWLETVQ HHHCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHEEEEHHHHCCCHHHHHHHHHHHHHH KVLSENRKVIGSDGRQVIYVPLPADASKPATASGNAGMPSMVPQDVLLNPPQNTSSEAIR HHHHCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHC NPERGPRLTGREGTE CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]