Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622472
Identifier: 84622472
GI number: 84622472
Start: 883676
End: 884002
Strand: Direct
Name: 84622472
Synonym: XOO_0815
Alternate gene names: NA
Gene position: 883676-884002 (Clockwise)
Preceding gene: 84622471
Following gene: 84622474
Centisome position: 17.89
GC content: 60.24
Gene sequence:
>327_bases ATGAACACGCTGCTGAGAAGTGTGCTGGTTGCTGCGCTACTGATGGCCGGCTGTGCCCGCGACGTGGGCGAGCAATTCGT GGGCAAGTGGGTCGACGTAACGTCGGAAAAGAACGTGCTGAGCATCGAGCACAATGGCGAGAGCTTCATCATTCGCGATA CCCGGCCGGAGCTGTTCGGCAATGGCGTCAAGACCCGCAACCATCCGGCACTGCTGACCAACGGCGTGCTGCAGGTGTCC AACGGGGTCGGTACGGTCAACTACGCGATCGATGAGGCGACCGGCAAGCTCAGTACAGGCGATACCGAGTACACGCGGGT GAAGTAA
Upstream 100 bases:
>100_bases GACAGACCCTGCGCTTAAGCACTTTTCGCTAGGGCCGGTGCCTTGTGAGCTCGACAGGGACTTGCCATCCTGCAAAACCC CTATTCGACATGGAATGGCG
Downstream 100 bases:
>100_bases CGGCCAGGCGCCGTGCCAACGGGTGGGGGCTGCAGTGAGCGGCGTTGCGGTCGGCGCGGTGATTGCTTTGTCAGTGTCGC TGTCTGTCGTGCGGGCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MNTLLRSVLVAALLMAGCARDVGEQFVGKWVDVTSEKNVLSIEHNGESFIIRDTRPELFGNGVKTRNHPALLTNGVLQVS NGVGTVNYAIDEATGKLSTGDTEYTRVK
Sequences:
>Translated_108_residues MNTLLRSVLVAALLMAGCARDVGEQFVGKWVDVTSEKNVLSIEHNGESFIIRDTRPELFGNGVKTRNHPALLTNGVLQVS NGVGTVNYAIDEATGKLSTGDTEYTRVK >Mature_108_residues MNTLLRSVLVAALLMAGCARDVGEQFVGKWVDVTSEKNVLSIEHNGESFIIRDTRPELFGNGVKTRNHPALLTNGVLQVS NGVGTVNYAIDEATGKLSTGDTEYTRVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11677; Mature: 11677
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTLLRSVLVAALLMAGCARDVGEQFVGKWVDVTSEKNVLSIEHNGESFIIRDTRPELFG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCHHHHC NGVKTRNHPALLTNGVLQVSNGVGTVNYAIDEATGKLSTGDTEYTRVK CCCCCCCCCCEEECCEEEECCCCCEEEEEEECCCCCCCCCCCCEEECC >Mature Secondary Structure MNTLLRSVLVAALLMAGCARDVGEQFVGKWVDVTSEKNVLSIEHNGESFIIRDTRPELFG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCHHHHC NGVKTRNHPALLTNGVLQVSNGVGTVNYAIDEATGKLSTGDTEYTRVK CCCCCCCCCCEEECCEEEECCCCCEEEEEEECCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA