Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is yceG [C]
Identifier: 84622467
GI number: 84622467
Start: 879279
End: 880352
Strand: Direct
Name: yceG [C]
Synonym: XOO_0810
Alternate gene names: 84622467
Gene position: 879279-880352 (Clockwise)
Preceding gene: 84622466
Following gene: 84622468
Centisome position: 17.8
GC content: 68.16
Gene sequence:
>1074_bases GTGGGTGTGGCGGTGACTGGCAAACGCGGATGTCTGGCCGTGCTGGGCACGGGATTGCTGCTCGCAGCGCTGCTGGCGAT TGCCGCCGTGGTGGCGTGGCGGCATTACCTGCACTTCGCCGATACTCCCGTGCCCGCGAGCGCGCCCAGCGTGGTGATTG CGCCCGGTGATGCGCTCAAGGCCACACTGCGCAAACTGCGTGCGGCCGGCCTGGCACAGGGCACCGAGCTGGAATGGCAG CTGCTGGCGCGTCAGGTCGATGCGGCCGGCAAGCTCAAGGTGGGCGAGTACGCGCTGGCACCGGCGCTGTCGCCGCGCGA ACTGCTGACGCGCATGCGCCAGGGGCGGGTGATCCAGTACCGCTTCACACTTGTGGAAGGCTGGAATTTCCGCCAGCTCC GCGCCGCACTGGCGACCGCCACGCCGCTGCAACATTCCACCAGTGTGCTGGACGATGCCGCGCTGATGGCGCGGCTGGGG TTCGCCAAGCAGCACCCGGAAGGGCGCTTCCTGCCAGAAACCTATGTGTACCAGCGTGGCGACAGCGATCTCGACGTGCT CAAGCGCGCGCATGCGGCCATGGACAAGGCGCTGGCGCAGGCGTGGGAACAGCGCACCCCGAATCTTCCGCTCGCTTCGC CGGAACAGGCATTGATCCTGGCCTCGATCATCGAAAAAGAAACCGCGTTGGCCACCGAGCGCCCGCTGATCGCCGGGGTG TTCCTGCGCCGTTTGCAGATGGGCATGAAGCTGCAGACCGACCCGACCGTGATCTACGGCATCGGCAGCAGCTACGACGG CAATATCCGCCGCCGCGACCTGACCACCGACACGCCGTACAACACCTACACCCGCACCGGCCTGACGCCGACGCCGATCG CCATGCCGGGCCGCGAGGCCCTGCTGGCGGCGGTGCGTCCGGCGCCCGGTGAGGCGCTGTATTTCGTGGCGGTGGGCGAT GGCACCGGCGCGCATGCATTCTCGGCCACGCTGGCCGAACATAACGCAGCGGTGGCACGCTATCTGCAGCGCCGCCGGCT GCAAAGCACGCCGCAAACCGAGCCCACGCCATGA
Upstream 100 bases:
>100_bases CAAGGCGCGGGGCGTGTTGCGCGCGATCGAGCAAACATGAGCGCTTCAACGGGACATCACCGGCACGCGGTATCCTGCGC GGCGATGGGGCAATGACGAG
Downstream 100 bases:
>100_bases CCGCCGCATTTGCACCCTGGCAGCAGCGTGCCTTCGACCAGACCGTGGCCGCGCTGGATGCGGGACGGCTCGGGCATGGG CTGCTGATCTGCGGCCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MGVAVTGKRGCLAVLGTGLLLAALLAIAAVVAWRHYLHFADTPVPASAPSVVIAPGDALKATLRKLRAAGLAQGTELEWQ LLARQVDAAGKLKVGEYALAPALSPRELLTRMRQGRVIQYRFTLVEGWNFRQLRAALATATPLQHSTSVLDDAALMARLG FAKQHPEGRFLPETYVYQRGDSDLDVLKRAHAAMDKALAQAWEQRTPNLPLASPEQALILASIIEKETALATERPLIAGV FLRRLQMGMKLQTDPTVIYGIGSSYDGNIRRRDLTTDTPYNTYTRTGLTPTPIAMPGREALLAAVRPAPGEALYFVAVGD GTGAHAFSATLAEHNAAVARYLQRRRLQSTPQTEPTP
Sequences:
>Translated_357_residues MGVAVTGKRGCLAVLGTGLLLAALLAIAAVVAWRHYLHFADTPVPASAPSVVIAPGDALKATLRKLRAAGLAQGTELEWQ LLARQVDAAGKLKVGEYALAPALSPRELLTRMRQGRVIQYRFTLVEGWNFRQLRAALATATPLQHSTSVLDDAALMARLG FAKQHPEGRFLPETYVYQRGDSDLDVLKRAHAAMDKALAQAWEQRTPNLPLASPEQALILASIIEKETALATERPLIAGV FLRRLQMGMKLQTDPTVIYGIGSSYDGNIRRRDLTTDTPYNTYTRTGLTPTPIAMPGREALLAAVRPAPGEALYFVAVGD GTGAHAFSATLAEHNAAVARYLQRRRLQSTPQTEPTP >Mature_356_residues GVAVTGKRGCLAVLGTGLLLAALLAIAAVVAWRHYLHFADTPVPASAPSVVIAPGDALKATLRKLRAAGLAQGTELEWQL LARQVDAAGKLKVGEYALAPALSPRELLTRMRQGRVIQYRFTLVEGWNFRQLRAALATATPLQHSTSVLDDAALMARLGF AKQHPEGRFLPETYVYQRGDSDLDVLKRAHAAMDKALAQAWEQRTPNLPLASPEQALILASIIEKETALATERPLIAGVF LRRLQMGMKLQTDPTVIYGIGSSYDGNIRRRDLTTDTPYNTYTRTGLTPTPIAMPGREALLAAVRPAPGEALYFVAVGDG TGAHAFSATLAEHNAAVARYLQRRRLQSTPQTEPTP
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=322, Percent_Identity=40.0621118012422, Blast_Score=210, Evalue=1e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 38614; Mature: 38483
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVAVTGKRGCLAVLGTGLLLAALLAIAAVVAWRHYLHFADTPVPASAPSVVIAPGDALK CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHH ATLRKLRAAGLAQGTELEWQLLARQVDAAGKLKVGEYALAPALSPRELLTRMRQGRVIQY HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEECCCHHCCCCCHHHHHHHHHHCCEEEE RFTLVEGWNFRQLRAALATATPLQHSTSVLDDAALMARLGFAKQHPEGRFLPETYVYQRG EEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEECC DSDLDVLKRAHAAMDKALAQAWEQRTPNLPLASPEQALILASIIEKETALATERPLIAGV CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH FLRRLQMGMKLQTDPTVIYGIGSSYDGNIRRRDLTTDTPYNTYTRTGLTPTPIAMPGREA HHHHHHHCCEECCCCEEEEECCCCCCCCEEECCCCCCCCCCCEEECCCCCCCCCCCCHHH LLAAVRPAPGEALYFVAVGDGTGAHAFSATLAEHNAAVARYLQRRRLQSTPQTEPTP HHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure GVAVTGKRGCLAVLGTGLLLAALLAIAAVVAWRHYLHFADTPVPASAPSVVIAPGDALK CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHH ATLRKLRAAGLAQGTELEWQLLARQVDAAGKLKVGEYALAPALSPRELLTRMRQGRVIQY HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEECCCHHCCCCCHHHHHHHHHHCCEEEE RFTLVEGWNFRQLRAALATATPLQHSTSVLDDAALMARLGFAKQHPEGRFLPETYVYQRG EEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEECC DSDLDVLKRAHAAMDKALAQAWEQRTPNLPLASPEQALILASIIEKETALATERPLIAGV CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH FLRRLQMGMKLQTDPTVIYGIGSSYDGNIRRRDLTTDTPYNTYTRTGLTPTPIAMPGREA HHHHHHHCCEECCCCEEEEECCCCCCCCEEECCCCCCCCCCCEEECCCCCCCCCCCCHHH LLAAVRPAPGEALYFVAVGDGTGAHAFSATLAEHNAAVARYLQRRRLQSTPQTEPTP HHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]