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The map label for this gene is pefL [H]

Identifier: 84622435

GI number: 84622435

Start: 843879

End: 845000

Strand: Direct

Name: pefL [H]

Synonym: XOO_0778

Alternate gene names: 84622435

Gene position: 843879-845000 (Clockwise)

Preceding gene: 84622434

Following gene: 84622436

Centisome position: 17.08

GC content: 66.49

Gene sequence:

>1122_bases
ATGACCGCATGGCGGGATACCTTGGGTCGTATCGGCGTACGCGCCATGCCGGGAGCCGGAGGGTTCTGGCGTTGGTGGCA
ACAATCGCTGCTGGCCTGGCTGCCGCAGCGGTGGCAATGGCAATTGGGTTTGTCGCAGGCACGCCTGTTGTTGCAACAGG
ACGGCGACGCGCTGCAGTTGCTGCGCCAGCGCGACCATAGCTGCGACAGCGTCGCCAGTCTGCCGTGGCCGGTCCATCCG
CAGGAAGTGAATAGCTTGCTGCCGACTGCGCTGGAAAGCCTGCCGCGGCATTGGCTGTTGCCGGCCGCGCACGCGCTGCG
CCGGCCATTGCGCCTGCCTGCCGCGGCCGCGGCGCGGTTGCAGGATGTGGCGCGTTTCGAGATCGATCGGCAAACCCCGT
TCACCGCCGACCAGGTGTATTTCGATGCGCGCGTGCTTGACGTGCGCGAAGACGGCCAGTTCGATGCCGAACTGGTGGTG
GTGCCGCGGCGCATGATCGATGGCCCGGCCGGTGTGCCGGACGCATGGAACAGCGCGCTGTCGGGCATCGATGTCACCGA
TGCGAAAGGCCTGCCACTTGGTGTGAACCTGCTGCCGCCGGCACGCCGCCTGCGCCGCAGCGACCCGATGCAGCGCTGGA
ATCTGCTGCTTGCCGCTTCAGCGCTGGTCTTGCTGGCGGTGGCCGGCTGGCTGCTGCTCGACAATCGCCGCCAGGCCGCC
GACGATCTGCGCGCCAAGGTGCAGGCCAACGCCGCGCGCGCGCGCCAGGTCGCTGCCGAACGCCAGCAATTGATGGATCT
GGTTGAAGGCGCGCGGTTCTTCCAGCAACAACGCGCGACCCGCCCGACCTCGGTGGAGATCTGGGACGAACTGAGCCGGC
GTTTGCCTGGTGGCACCTATCTGGAAAAATTTTCAGTCGAAGGCGGGCAATTGCAGTTGATCGGATTGAGCAATGAAGCT
TCTTCGCTGGTGCGTCGTCTGGAAGGCTCGCCGCTGTGGCGCACGCCATCGCTGACCGGCGTGCTGCAGAGCGATGCCGG
CCGTAACGTCGACCGCTTCACCATCACCGCCGAACTTGCCGGCCCCGATGCGAAGGAGGCGGCCGATGCCACGCAGCGTT
AA

Upstream 100 bases:

>100_bases
GACGCGAGGCTGTGTTGCGGGCGTTGGTGTCGACCGGCGCGTCCGCATTACCAGGGTCGGCCTATACCGTGTTGCGTTGG
GAAGAGGGAGCAGCAGTGCA

Downstream 100 bases:

>100_bases
GCGCGATCGCTGGATCGCTTTGGGCCTGCTGTTGCTGGTGCTCGGCGTGGCCTACCTGGTGCTGGTGCACCCGTGGTTCA
CGCAACCGATGATTGCGGTG

Product: general secretion pathway protein L

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MTAWRDTLGRIGVRAMPGAGGFWRWWQQSLLAWLPQRWQWQLGLSQARLLLQQDGDALQLLRQRDHSCDSVASLPWPVHP
QEVNSLLPTALESLPRHWLLPAAHALRRPLRLPAAAAARLQDVARFEIDRQTPFTADQVYFDARVLDVREDGQFDAELVV
VPRRMIDGPAGVPDAWNSALSGIDVTDAKGLPLGVNLLPPARRLRRSDPMQRWNLLLAASALVLLAVAGWLLLDNRRQAA
DDLRAKVQANAARARQVAAERQQLMDLVEGARFFQQQRATRPTSVEIWDELSRRLPGGTYLEKFSVEGGQLQLIGLSNEA
SSLVRRLEGSPLWRTPSLTGVLQSDAGRNVDRFTITAELAGPDAKEAADATQR

Sequences:

>Translated_373_residues
MTAWRDTLGRIGVRAMPGAGGFWRWWQQSLLAWLPQRWQWQLGLSQARLLLQQDGDALQLLRQRDHSCDSVASLPWPVHP
QEVNSLLPTALESLPRHWLLPAAHALRRPLRLPAAAAARLQDVARFEIDRQTPFTADQVYFDARVLDVREDGQFDAELVV
VPRRMIDGPAGVPDAWNSALSGIDVTDAKGLPLGVNLLPPARRLRRSDPMQRWNLLLAASALVLLAVAGWLLLDNRRQAA
DDLRAKVQANAARARQVAAERQQLMDLVEGARFFQQQRATRPTSVEIWDELSRRLPGGTYLEKFSVEGGQLQLIGLSNEA
SSLVRRLEGSPLWRTPSLTGVLQSDAGRNVDRFTITAELAGPDAKEAADATQR
>Mature_372_residues
TAWRDTLGRIGVRAMPGAGGFWRWWQQSLLAWLPQRWQWQLGLSQARLLLQQDGDALQLLRQRDHSCDSVASLPWPVHPQ
EVNSLLPTALESLPRHWLLPAAHALRRPLRLPAAAAARLQDVARFEIDRQTPFTADQVYFDARVLDVREDGQFDAELVVV
PRRMIDGPAGVPDAWNSALSGIDVTDAKGLPLGVNLLPPARRLRRSDPMQRWNLLLAASALVLLAVAGWLLLDNRRQAAD
DLRAKVQANAARARQVAAERQQLMDLVEGARFFQQQRATRPTSVEIWDELSRRLPGGTYLEKFSVEGGQLQLIGLSNEAS
SLVRRLEGSPLWRTPSLTGVLQSDAGRNVDRFTITAELAGPDAKEAADATQR

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG3166

COG function: function code NU; Tfp pilus assembly protein PilN

Gene ontology:

Cell location: Cell inner membrane (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP L family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007813 [H]

Pfam domain/function: PF05137 PilN [H]

EC number: NA

Molecular weight: Translated: 41568; Mature: 41437

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: PS00133 CARBOXYPEPT_ZN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAWRDTLGRIGVRAMPGAGGFWRWWQQSLLAWLPQRWQWQLGLSQARLLLQQDGDALQL
CCCHHHHHHHCCCEECCCCCHHHHHHHHHHHHHCCHHHEEHHCHHHHHHHHHCCCHHHHH
LRQRDHSCDSVASLPWPVHPQEVNSLLPTALESLPRHWLLPAAHALRRPLRLPAAAAARL
HHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHH
QDVARFEIDRQTPFTADQVYFDARVLDVREDGQFDAELVVVPRRMIDGPAGVPDAWNSAL
HHHHHHHCCCCCCCCHHHEEEEEEEEEECCCCCCCCEEEEECHHHCCCCCCCCHHHHHHH
SGIDVTDAKGLPLGVNLLPPARRLRRSDPMQRWNLLLAASALVLLAVAGWLLLDNRRQAA
CCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
DDLRAKVQANAARARQVAAERQQLMDLVEGARFFQQQRATRPTSVEIWDELSRRLPGGTY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCH
LEKFSVEGGQLQLIGLSNEASSLVRRLEGSPLWRTPSLTGVLQSDAGRNVDRFTITAELA
HHHCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCEEEEEEEEEC
GPDAKEAADATQR
CCCHHHHHHCCCC
>Mature Secondary Structure 
TAWRDTLGRIGVRAMPGAGGFWRWWQQSLLAWLPQRWQWQLGLSQARLLLQQDGDALQL
CCHHHHHHHCCCEECCCCCHHHHHHHHHHHHHCCHHHEEHHCHHHHHHHHHCCCHHHHH
LRQRDHSCDSVASLPWPVHPQEVNSLLPTALESLPRHWLLPAAHALRRPLRLPAAAAARL
HHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHH
QDVARFEIDRQTPFTADQVYFDARVLDVREDGQFDAELVVVPRRMIDGPAGVPDAWNSAL
HHHHHHHCCCCCCCCHHHEEEEEEEEEECCCCCCCCEEEEECHHHCCCCCCCCHHHHHHH
SGIDVTDAKGLPLGVNLLPPARRLRRSDPMQRWNLLLAASALVLLAVAGWLLLDNRRQAA
CCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
DDLRAKVQANAARARQVAAERQQLMDLVEGARFFQQQRATRPTSVEIWDELSRRLPGGTY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCH
LEKFSVEGGQLQLIGLSNEASSLVRRLEGSPLWRTPSLTGVLQSDAGRNVDRFTITAELA
HHHCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCEEEEEEEEEC
GPDAKEAADATQR
CCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]