Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
---|---|
Accession | NC_007705 |
Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is rimI [H]
Identifier: 84622398
GI number: 84622398
Start: 798263
End: 798745
Strand: Direct
Name: rimI [H]
Synonym: XOO_0741
Alternate gene names: 84622398
Gene position: 798263-798745 (Clockwise)
Preceding gene: 84622397
Following gene: 84622399
Centisome position: 16.16
GC content: 64.18
Gene sequence:
>483_bases GTGAGCGCATTGAACGTGCCGCAACCCACCGCGTTGCGCGCAATGCGCGAGAGCGACCTGGAGGTGGTGATGGAGATCGA GCTCCGCGCCTATCCGTTTCCGTGGACGCGCAACATCTTTCGCGACTGTCTGCAGTCCGGCTATCCCGGCTGGGTGATGG AGCAGGGCGGTCGGGTCATCGGCTATGGCGTGATCAGCATCGCCGCCGACGAGGCGCATGTGCTGAACGTCTGCATCGCA CCGGAAGCGCAATCGCAAGGCCACGGGCGCGTGTTGCTACGCGCGCTGATCAAGGGCGCCTGCGATCGCGGCGCGCGGCG CGCGTTTCTGGAAGTGCGCCCGTCCAATCCATCCGCGATTGCGCTGTATCACTCCGAAGGCTTCAACGAAATCGGCCGCC GTCCGCGCTACTACCCATCCCACAGCGGGCGCGAAGATGCGTTGGTGATGGCGATCGAGTTGTTCTTCGAAGGGTTCTCC TGA
Upstream 100 bases:
>100_bases TGATGGTCTCCTGGCCGTTGGCAGAACTGCGCGGCAATCCGGCTGCCAAGCGTGCGCTGTGGCCGCAGCTGCGCGCGTTG CGGCGGCGTCGGGACCCCGC
Downstream 100 bases:
>100_bases GCGCACGCCGTCGTCGTTGAGGACGCGGCTGGTTGCTGCTGCCGCGATACCAGTTCGGGTCGCTGGCTGCCGACGATGAC GGTTGTGGATGACTGAGAAC
Product: ribosomal-protein-alanine acetyltransferase
Products: NA
Alternate protein names: Acetylating enzyme for N-terminal of ribosomal protein S18 [H]
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MSALNVPQPTALRAMRESDLEVVMEIELRAYPFPWTRNIFRDCLQSGYPGWVMEQGGRVIGYGVISIAADEAHVLNVCIA PEAQSQGHGRVLLRALIKGACDRGARRAFLEVRPSNPSAIALYHSEGFNEIGRRPRYYPSHSGREDALVMAIELFFEGFS
Sequences:
>Translated_160_residues MSALNVPQPTALRAMRESDLEVVMEIELRAYPFPWTRNIFRDCLQSGYPGWVMEQGGRVIGYGVISIAADEAHVLNVCIA PEAQSQGHGRVLLRALIKGACDRGARRAFLEVRPSNPSAIALYHSEGFNEIGRRPRYYPSHSGREDALVMAIELFFEGFS >Mature_159_residues SALNVPQPTALRAMRESDLEVVMEIELRAYPFPWTRNIFRDCLQSGYPGWVMEQGGRVIGYGVISIAADEAHVLNVCIAP EAQSQGHGRVLLRALIKGACDRGARRAFLEVRPSNPSAIALYHSEGFNEIGRRPRYYPSHSGREDALVMAIELFFEGFS
Specific function: This enzyme acetylates the N-terminal alanine of ribosomal protein S18 [H]
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI2367381, Length=142, Percent_Identity=39.4366197183099, Blast_Score=116, Evalue=7e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR006464 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.128 [H]
Molecular weight: Translated: 17838; Mature: 17706
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALNVPQPTALRAMRESDLEVVMEIELRAYPFPWTRNIFRDCLQSGYPGWVMEQGGRVI CCCCCCCCHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHHHHCCCCCEEECCCCEEE GYGVISIAADEAHVLNVCIAPEAQSQGHGRVLLRALIKGACDRGARRAFLEVRPSNPSAI EEEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEE ALYHSEGFNEIGRRPRYYPSHSGREDALVMAIELFFEGFS EEEECCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure SALNVPQPTALRAMRESDLEVVMEIELRAYPFPWTRNIFRDCLQSGYPGWVMEQGGRVI CCCCCCCHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHHHHCCCCCEEECCCCEEE GYGVISIAADEAHVLNVCIAPEAQSQGHGRVLLRALIKGACDRGARRAFLEVRPSNPSAI EEEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEE ALYHSEGFNEIGRRPRYYPSHSGREDALVMAIELFFEGFS EEEECCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]