Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
---|---|
Accession | NC_007705 |
Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is 84622397
Identifier: 84622397
GI number: 84622397
Start: 797799
End: 798266
Strand: Direct
Name: 84622397
Synonym: XOO_0740
Alternate gene names: NA
Gene position: 797799-798266 (Clockwise)
Preceding gene: 84622396
Following gene: 84622398
Centisome position: 16.15
GC content: 70.94
Gene sequence:
>468_bases GTGAGCGAGCCGCCGTCCGAGCCGATGTGGTCCGATCTGCAGGTGTCGTATCTGCAGGCGTTGGGGCACACCGTGTATCT GGATCGCGATGCGGCCGATGCGTTGCCTGCGCCTGTCGAAGTTGCCGAGCGCGCAGAGATGGCCGCACCGGCGCGCGTGG AGCGTGGGCCGCAGTCTGCAGTGGTGAGTACGCCCGTCGCGCGGCGCAGCGCGACGGCCGCTCCAGCCGAAGCGCCACGT GCGCCAAACACTGCGCCAGCAGCGGCGCCGCAACGGCGCAGCCGCGTCGGCATGCCGGATCGTCTGCAGATGGCCTTGTT GCGCGCGTCCGGTTGCAATCCGGGCGACCCTGCGACACAGGCCTTGATGGTCTCCTGGCCGTTGGCAGAACTGCGCGGCA ATCCGGCTGCCAAGCGTGCGCTGTGGCCGCAGCTGCGCGCGTTGCGGCGGCGTCGGGACCCCGCGTGA
Upstream 100 bases:
>100_bases TCCTTTCTGGTGATCGGCGTGCTGTATGCCTTGTCTGGCCCGCTGATGTGGCTGTGGCGACGTTGGCGGCGCGTGCCAGA GCTGCCATGAGCGCGTTTTC
Downstream 100 bases:
>100_bases GCGCATTGAACGTGCCGCAACCCACCGCGTTGCGCGCAATGCGCGAGAGCGACCTGGAGGTGGTGATGGAGATCGAGCTC CGCGCCTATCCGTTTCCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MSEPPSEPMWSDLQVSYLQALGHTVYLDRDAADALPAPVEVAERAEMAAPARVERGPQSAVVSTPVARRSATAAPAEAPR APNTAPAAAPQRRSRVGMPDRLQMALLRASGCNPGDPATQALMVSWPLAELRGNPAAKRALWPQLRALRRRRDPA
Sequences:
>Translated_155_residues MSEPPSEPMWSDLQVSYLQALGHTVYLDRDAADALPAPVEVAERAEMAAPARVERGPQSAVVSTPVARRSATAAPAEAPR APNTAPAAAPQRRSRVGMPDRLQMALLRASGCNPGDPATQALMVSWPLAELRGNPAAKRALWPQLRALRRRRDPA >Mature_154_residues SEPPSEPMWSDLQVSYLQALGHTVYLDRDAADALPAPVEVAERAEMAAPARVERGPQSAVVSTPVARRSATAAPAEAPRA PNTAPAAAPQRRSRVGMPDRLQMALLRASGCNPGDPATQALMVSWPLAELRGNPAAKRALWPQLRALRRRRDPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16615; Mature: 16484
Theoretical pI: Translated: 11.01; Mature: 11.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPPSEPMWSDLQVSYLQALGHTVYLDRDAADALPAPVEVAERAEMAAPARVERGPQSA CCCCCCCCCCHHHHHHHHHHHCCEEEECCCHHHCCCCCHHHHHHHHHCCCHHHHCCCCCH VVSTPVARRSATAAPAEAPRAPNTAPAAAPQRRSRVGMPDRLQMALLRASGCNPGDPATQ HHCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCHHHH ALMVSWPLAELRGNPAAKRALWPQLRALRRRRDPA HHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SEPPSEPMWSDLQVSYLQALGHTVYLDRDAADALPAPVEVAERAEMAAPARVERGPQSA CCCCCCCCCHHHHHHHHHHHCCEEEECCCHHHCCCCCHHHHHHHHHCCCHHHHCCCCCH VVSTPVARRSATAAPAEAPRAPNTAPAAAPQRRSRVGMPDRLQMALLRASGCNPGDPATQ HHCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCHHHH ALMVSWPLAELRGNPAAKRALWPQLRALRRRRDPA HHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA