Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622372
Identifier: 84622372
GI number: 84622372
Start: 770067
End: 771251
Strand: Direct
Name: 84622372
Synonym: XOO_0715
Alternate gene names: NA
Gene position: 770067-771251 (Clockwise)
Preceding gene: 84622371
Following gene: 84622377
Centisome position: 15.59
GC content: 61.52
Gene sequence:
>1185_bases ATGCTGGACGAACTGACGTCAGGCTGCAAGACGCCACAGGACGTTGAGAAGCTGTTTTCGCAAATGTTGCAGCACATGAT CAATCGCTCGTTGGAGGCGGAGATGCAAGCCCATGTGGGCCATGCGCCGCATGGGCGCTCAGGCGGCAACGTGCGCAATG GCAAGAGCCGCAAGACGGTGCAAAGCGCGTTGGGCGAGTTGCAGATCGAGACCCCGCGCGACCGCGCGGGCACGTTCGCG CCACAGTTGGTGAAGAAGCGCCAGGTGCGGCTGGCGGGGATGGAGGAGAAGATTCTGGCGTTGTACGCGCGCGGCATGAC CACGCGCGACATCGAGTCTGCGCTGGTGGACGTGTATGGGGTGGAGATATCGCATGGGTTGATCGCACAGGTGACCGACG CGGTGCTGGAGGAGGCGCGGGCATGGCAATCGAGGCCGCTGGAGGCGATCTATCCGATCGTGTGGCTGGACGGCATCGTG GTGAAGGTGCAGCACAACAAGCAGGTCATCAACAAGGCCGCGCACGTGGTGCTGGGGGTCAACCTGCGCGGGGAGAAGGA AGTGCTTGGCCTGTGGTTGGCTGAACACGAGGGCGCCCAATACTGGCTGTCGGTGTTGACCGAACTGCGTCATCGCGGCG TGCGCGACATCTACATCGCCTGCATGGATGGCTTGAAGGGCCTGCCCGAAGCGGTGCAAGCGGTGTTTCCGCAGACGCTC ACGCAACTGTGCATTGTGCATTTGGTGCGGGCCAGTCTGCGCTACGTCAACGCAGGCGACAGCAAGGCGGTTGTGGCTGC GCTCAAGCGCATCTATCAGTCGGCCACGGCGGAAGAAGCGGCGGCGGAACTGGAGGCGCTGGACACGCAGTGGGGCGACA AATACCGTGCGGTGGTCCGCTTGTGGCGGGGCAACTGGGACAACATCATCCCGTTCTTCCAGTTCGTGCCGCAGATCCGC AAGGTGATCTACACCACCAATGCCATCGAATCGTTGAACATGGTCATGCGCAAGCTCACCCGCAACCGGCGTATTTTCCC CAACGACGATTCGGCGCTCAAATCGTTGTTTTTGGCCGTGCGCGAGGCATCGAAGAACTGGCGGTCCATCCATCACTGGA AACCGGCTCTGCAAAGCTTCCAGGTGATGTTCGGCGAAGAACGCGTGCCGATGAATGCGCTATGA
Upstream 100 bases:
>100_bases GCCGTCCTGCCGGAGTCTGTAAATTGAACTGTGTAACTGCCCTTTGACAAGCGACTGGCCCGGACCGGAGAGGAGCAGGC AAGTGGAACTGGATAAGACG
Downstream 100 bases:
>100_bases AAAACCTGGTTACACAGTTGGCTTGACAGACCCTCCTGCCTGCCCGCCGAGCAGTTGCCTGCCGATGAGCTGTTTCGTTC GCGTCTGGAGAACCAGATCG
Product: IS1113 transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MLDELTSGCKTPQDVEKLFSQMLQHMINRSLEAEMQAHVGHAPHGRSGGNVRNGKSRKTVQSALGELQIETPRDRAGTFA PQLVKKRQVRLAGMEEKILALYARGMTTRDIESALVDVYGVEISHGLIAQVTDAVLEEARAWQSRPLEAIYPIVWLDGIV VKVQHNKQVINKAAHVVLGVNLRGEKEVLGLWLAEHEGAQYWLSVLTELRHRGVRDIYIACMDGLKGLPEAVQAVFPQTL TQLCIVHLVRASLRYVNAGDSKAVVAALKRIYQSATAEEAAAELEALDTQWGDKYRAVVRLWRGNWDNIIPFFQFVPQIR KVIYTTNAIESLNMVMRKLTRNRRIFPNDDSALKSLFLAVREASKNWRSIHHWKPALQSFQVMFGEERVPMNAL
Sequences:
>Translated_394_residues MLDELTSGCKTPQDVEKLFSQMLQHMINRSLEAEMQAHVGHAPHGRSGGNVRNGKSRKTVQSALGELQIETPRDRAGTFA PQLVKKRQVRLAGMEEKILALYARGMTTRDIESALVDVYGVEISHGLIAQVTDAVLEEARAWQSRPLEAIYPIVWLDGIV VKVQHNKQVINKAAHVVLGVNLRGEKEVLGLWLAEHEGAQYWLSVLTELRHRGVRDIYIACMDGLKGLPEAVQAVFPQTL TQLCIVHLVRASLRYVNAGDSKAVVAALKRIYQSATAEEAAAELEALDTQWGDKYRAVVRLWRGNWDNIIPFFQFVPQIR KVIYTTNAIESLNMVMRKLTRNRRIFPNDDSALKSLFLAVREASKNWRSIHHWKPALQSFQVMFGEERVPMNAL >Mature_394_residues MLDELTSGCKTPQDVEKLFSQMLQHMINRSLEAEMQAHVGHAPHGRSGGNVRNGKSRKTVQSALGELQIETPRDRAGTFA PQLVKKRQVRLAGMEEKILALYARGMTTRDIESALVDVYGVEISHGLIAQVTDAVLEEARAWQSRPLEAIYPIVWLDGIV VKVQHNKQVINKAAHVVLGVNLRGEKEVLGLWLAEHEGAQYWLSVLTELRHRGVRDIYIACMDGLKGLPEAVQAVFPQTL TQLCIVHLVRASLRYVNAGDSKAVVAALKRIYQSATAEEAAAELEALDTQWGDKYRAVVRLWRGNWDNIIPFFQFVPQIR KVIYTTNAIESLNMVMRKLTRNRRIFPNDDSALKSLFLAVREASKNWRSIHHWKPALQSFQVMFGEERVPMNAL
Specific function: Required for the transposition of the insertion element [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001207 [H]
Pfam domain/function: PF00872 Transposase_mut [H]
EC number: NA
Molecular weight: Translated: 44456; Mature: 44456
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: PS01007 TRANSPOSASE_MUTATOR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDELTSGCKTPQDVEKLFSQMLQHMINRSLEAEMQAHVGHAPHGRSGGNVRNGKSRKTV CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH QSALGELQIETPRDRAGTFAPQLVKKRQVRLAGMEEKILALYARGMTTRDIESALVDVYG HHHHHCEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHH VEISHGLIAQVTDAVLEEARAWQSRPLEAIYPIVWLDGIVVKVQHNKQVINKAAHVVLGV HHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHEEEC NLRGEKEVLGLWLAEHEGAQYWLSVLTELRHRGVRDIYIACMDGLKGLPEAVQAVFPQTL CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHH TQLCIVHLVRASLRYVNAGDSKAVVAALKRIYQSATAEEAAAELEALDTQWGDKYRAVVR HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LWRGNWDNIIPFFQFVPQIRKVIYTTNAIESLNMVMRKLTRNRRIFPNDDSALKSLFLAV HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH REASKNWRSIHHWKPALQSFQVMFGEERVPMNAL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MLDELTSGCKTPQDVEKLFSQMLQHMINRSLEAEMQAHVGHAPHGRSGGNVRNGKSRKTV CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH QSALGELQIETPRDRAGTFAPQLVKKRQVRLAGMEEKILALYARGMTTRDIESALVDVYG HHHHHCEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHH VEISHGLIAQVTDAVLEEARAWQSRPLEAIYPIVWLDGIVVKVQHNKQVINKAAHVVLGV HHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHEEEC NLRGEKEVLGLWLAEHEGAQYWLSVLTELRHRGVRDIYIACMDGLKGLPEAVQAVFPQTL CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHH TQLCIVHLVRASLRYVNAGDSKAVVAALKRIYQSATAEEAAAELEALDTQWGDKYRAVVR HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LWRGNWDNIIPFFQFVPQIRKVIYTTNAIESLNMVMRKLTRNRRIFPNDDSALKSLFLAV HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH REASKNWRSIHHWKPALQSFQVMFGEERVPMNAL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1849509; 1327271; 11481430; 11481432 [H]