Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622362
Identifier: 84622362
GI number: 84622362
Start: 757560
End: 758450
Strand: Direct
Name: 84622362
Synonym: XOO_0705
Alternate gene names: NA
Gene position: 757560-758450 (Clockwise)
Preceding gene: 84622361
Following gene: 84622363
Centisome position: 15.33
GC content: 69.14
Gene sequence:
>891_bases ATGAAACTGCGCCCACTGCTCTATCTCGGTGTCTTGAGCCTGGCTGCGTTGCCGCCGCTGGCGATGGCGGCCAAGGACGA CCCGCAGGCCGACGCGCTCAACCGGCGTCTGGCCGCGCTGCAAAACGATCCGCAAACCAACGAGCTGGCCCGCTTCGAAC GGCTGCAGGCGCAGCAGAGCGTCGCTGCGCTGGCCGAAGCCAAGCGGCGCGACCGCGACGAGCTGGTGTTTCTGGCCGAT CGCCGGGTCGAGATCGCCGAACTCACTGCCCGTACCGCGCTGGCACGGCGTGAGCTGGACCGGCTGGAAGGTACGCGCAA CGACTTGCTGATCGAAGCCAGTCGCCGCGACGCTGCGCGTGCGCGCCAGGAGGCAGAACGTCTGCGCGTGCAGGCGCAGA TCCAGACCGAGGCCGCCGAGCAGGCACGCCAGTCCGCCGAACAGGAGGCGCTTGCCCGGCAGGACGCCGAGCTGGCGCTG ACCAGCGTGGCCGGTAGGCAGACCGCCAAGCTCAACGCGGCCCAGCAGAAGGCAGTACAGCTGGCGCATGAGGAAGCCGA GCTGGTGGCCGGGGCCAAGTTGCCGGCTGCCAAGTTCGACAGCCGTGGCGAAGTGTTCTCGCTGGGCAGTGGCGCCTTCG GTGGCAAGGCGGCGCTGTCCGGCGATGCCGCCGGGCAGGCCAAGGCCTTGGCCGAATATCTGAACATCGGCAAGAAGGGC CGGGTCAGCATCGTCGGGTTCGACAACGACGCAGCCACCGCGAAGAAGCGTGCCGAAGCACTACGCGATGCCTTGGTGGC GGGCGGGGTGGCGGCCTCGCGGCTGCAGGTCACCGGTACCAAAGGCGCGGCCAACAAGACCCGTGCGGCCGAGGTCGTTG TCGCGCCCTGA
Upstream 100 bases:
>100_bases AGGCACGCAGCGAAGAGGCGGTGGTCACCGCCCAACTGGAACAGCGCAAGAAGGAAGTGGCGCAGTTGCAGAGCACACTC AACACCGGGGAGAGCGGCCG
Downstream 100 bases:
>100_bases CGGCAAGTGATTGGAAGTTAAAGCCTTTTAACCGGGGCATGACGCTTGGTTGAACCGCAGTCACCAATTGCGACAATGAA CGGCAAATGTGGCTGTTTCG
Product: outer membrane protein
Products: NA
Alternate protein names: Outer Membrane Protein UptE; OmpA/MotB Domain-Containing Protein
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MKLRPLLYLGVLSLAALPPLAMAAKDDPQADALNRRLAALQNDPQTNELARFERLQAQQSVAALAEAKRRDRDELVFLAD RRVEIAELTARTALARRELDRLEGTRNDLLIEASRRDAARARQEAERLRVQAQIQTEAAEQARQSAEQEALARQDAELAL TSVAGRQTAKLNAAQQKAVQLAHEEAELVAGAKLPAAKFDSRGEVFSLGSGAFGGKAALSGDAAGQAKALAEYLNIGKKG RVSIVGFDNDAATAKKRAEALRDALVAGGVAASRLQVTGTKGAANKTRAAEVVVAP
Sequences:
>Translated_296_residues MKLRPLLYLGVLSLAALPPLAMAAKDDPQADALNRRLAALQNDPQTNELARFERLQAQQSVAALAEAKRRDRDELVFLAD RRVEIAELTARTALARRELDRLEGTRNDLLIEASRRDAARARQEAERLRVQAQIQTEAAEQARQSAEQEALARQDAELAL TSVAGRQTAKLNAAQQKAVQLAHEEAELVAGAKLPAAKFDSRGEVFSLGSGAFGGKAALSGDAAGQAKALAEYLNIGKKG RVSIVGFDNDAATAKKRAEALRDALVAGGVAASRLQVTGTKGAANKTRAAEVVVAP >Mature_296_residues MKLRPLLYLGVLSLAALPPLAMAAKDDPQADALNRRLAALQNDPQTNELARFERLQAQQSVAALAEAKRRDRDELVFLAD RRVEIAELTARTALARRELDRLEGTRNDLLIEASRRDAARARQEAERLRVQAQIQTEAAEQARQSAEQEALARQDAELAL TSVAGRQTAKLNAAQQKAVQLAHEEAELVAGAKLPAAKFDSRGEVFSLGSGAFGGKAALSGDAAGQAKALAEYLNIGKKG RVSIVGFDNDAATAKKRAEALRDALVAGGVAASRLQVTGTKGAANKTRAAEVVVAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31499; Mature: 31499
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRPLLYLGVLSLAALPPLAMAAKDDPQADALNRRLAALQNDPQTNELARFERLQAQQS CCCCHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH VAALAEAKRRDRDELVFLADRRVEIAELTARTALARRELDRLEGTRNDLLIEASRRDAAR HHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHH ARQEAERLRVQAQIQTEAAEQARQSAEQEALARQDAELALTSVAGRQTAKLNAAQQKAVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LAHEEAELVAGAKLPAAKFDSRGEVFSLGSGAFGGKAALSGDAAGQAKALAEYLNIGKKG HHHHHHHHHHCCCCCHHHCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC RVSIVGFDNDAATAKKRAEALRDALVAGGVAASRLQVTGTKGAANKTRAAEVVVAP CEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCCCCCCCCCEEEECC >Mature Secondary Structure MKLRPLLYLGVLSLAALPPLAMAAKDDPQADALNRRLAALQNDPQTNELARFERLQAQQS CCCCHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH VAALAEAKRRDRDELVFLADRRVEIAELTARTALARRELDRLEGTRNDLLIEASRRDAAR HHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHH ARQEAERLRVQAQIQTEAAEQARQSAEQEALARQDAELALTSVAGRQTAKLNAAQQKAVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LAHEEAELVAGAKLPAAKFDSRGEVFSLGSGAFGGKAALSGDAAGQAKALAEYLNIGKKG HHHHHHHHHHCCCCCHHHCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC RVSIVGFDNDAATAKKRAEALRDALVAGGVAASRLQVTGTKGAANKTRAAEVVVAP CEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA