Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622361
Identifier: 84622361
GI number: 84622361
Start: 757180
End: 757563
Strand: Direct
Name: 84622361
Synonym: XOO_0704
Alternate gene names: NA
Gene position: 757180-757563 (Clockwise)
Preceding gene: 84622359
Following gene: 84622362
Centisome position: 15.33
GC content: 64.58
Gene sequence:
>384_bases ATGACGGCTAGCTTCGCATACTTGCGGCGATCCCTGTATGGCATCGCCTGTTTCATCGTTCTTTCCTCTCCGGCCGCCGC CCAGGTGGCACCGGAGCTCACCGCTGCCGAACAGGCCGTGCAACGCGCCACGCAGGCCGATGCCGACCAATACGCCCCGG ATCTGGTCAACCTGGCACGCCAGGAACTGATGCAGGCCCAGCAGGCGCAACTTGACAAGCGCCAGCGCAAGCAGGTGCCC CAGATCGCTTTACGCGCAGCTGCCGACGCCGATCTGGCCAAGGCACGCAGCGAAGAGGCGGTGGTCACCGCCCAACTGGA ACAGCGCAAGAAGGAAGTGGCGCAGTTGCAGAGCACACTCAACACCGGGGAGAGCGGCCGATGA
Upstream 100 bases:
>100_bases ATGCGCAATGGTTCCCCAACAAACAGCAGCGTCTCGTTGCAAGTCCGCCGCAGGCTTCCGACAATGGCCGTGCTCGAGAC TTCTCGCTACGGCTCCCCTA
Downstream 100 bases:
>100_bases AACTGCGCCCACTGCTCTATCTCGGTGTCTTGAGCCTGGCTGCGTTGCCGCCGCTGGCGATGGCGGCCAAGGACGACCCG CAGGCCGACGCGCTCAACCG
Product: outer membran protein
Products: NA
Alternate protein names: Outer Membran Protein
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MTASFAYLRRSLYGIACFIVLSSPAAAQVAPELTAAEQAVQRATQADADQYAPDLVNLARQELMQAQQAQLDKRQRKQVP QIALRAAADADLAKARSEEAVVTAQLEQRKKEVAQLQSTLNTGESGR
Sequences:
>Translated_127_residues MTASFAYLRRSLYGIACFIVLSSPAAAQVAPELTAAEQAVQRATQADADQYAPDLVNLARQELMQAQQAQLDKRQRKQVP QIALRAAADADLAKARSEEAVVTAQLEQRKKEVAQLQSTLNTGESGR >Mature_126_residues TASFAYLRRSLYGIACFIVLSSPAAAQVAPELTAAEQAVQRATQADADQYAPDLVNLARQELMQAQQAQLDKRQRKQVPQ IALRAAADADLAKARSEEAVVTAQLEQRKKEVAQLQSTLNTGESGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13799; Mature: 13668
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASFAYLRRSLYGIACFIVLSSPAAAQVAPELTAAEQAVQRATQADADQYAPDLVNLAR CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHH QELMQAQQAQLDKRQRKQVPQIALRAAADADLAKARSEEAVVTAQLEQRKKEVAQLQSTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH NTGESGR CCCCCCC >Mature Secondary Structure TASFAYLRRSLYGIACFIVLSSPAAAQVAPELTAAEQAVQRATQADADQYAPDLVNLAR CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHH QELMQAQQAQLDKRQRKQVPQIALRAAADADLAKARSEEAVVTAQLEQRKKEVAQLQSTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH NTGESGR CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA