Click here to switch to the map view.

The map label for this gene is pcaC [H]

Identifier: 84622110

GI number: 84622110

Start: 492026

End: 492439

Strand: Direct

Name: pcaC [H]

Synonym: XOO_0453

Alternate gene names: 84622110

Gene position: 492026-492439 (Clockwise)

Preceding gene: 84622109

Following gene: 84622111

Centisome position: 9.96

GC content: 65.46

Gene sequence:

>414_bases
ATGCACGAAGACGAACGTTATCAAGCCGGCATGCGTGAGCGCCGGCGCCTCCTGGGCGATGCGCATGTCGACCGCGCGCT
GGCTGCGCGTAGCGACTTCACCGAAGAATTCCAGGACCTGATCACCCGCTACGCCTGGGGCAGCATCTGGACCCGCGACG
GCCTGCCGGCGCACACGCGCTCGCTGCTCACCTTGGCGATGATGGTCGCGCTGGGCCACGACGAAGAATTCAAACTACAC
GTGCGTGCAGCGCGCAACAACGGCGTGACGCCTGCGCAGATCAAGGAAGTGCTGCTGCAAGCGGCAATCCATTGCGGCGT
GCCGGCTGCCAATCACGCCTTTGCGCTGGCCAGGCCGATTCTGGAAGAACAAGCTGCCGAGGCCGGCGCAGCGCCAGCGG
CGTCACCCGGATAA

Upstream 100 bases:

>100_bases
GGCCGCCACATCTGCAACCTGGAATCGCCGGCCGCGTTCAACGACGCGGTGCTCGGCTTTCTTCAGGCCGACTGAGCTGC
CCACCTTGCAAGGACACCCC

Downstream 100 bases:

>100_bases
GGTCGTCTTGGAGCGGCTAACAAAATGAGCGCGCTCGCCGCGAGGCCGGCGCGGTCGGTGCGCGATGCAGTATGTGCCAC
TTGTCCACTGCGGTGGTAAG

Product: 4-carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MHEDERYQAGMRERRRLLGDAHVDRALAARSDFTEEFQDLITRYAWGSIWTRDGLPAHTRSLLTLAMMVALGHDEEFKLH
VRAARNNGVTPAQIKEVLLQAAIHCGVPAANHAFALARPILEEQAAEAGAAPAASPG

Sequences:

>Translated_137_residues
MHEDERYQAGMRERRRLLGDAHVDRALAARSDFTEEFQDLITRYAWGSIWTRDGLPAHTRSLLTLAMMVALGHDEEFKLH
VRAARNNGVTPAQIKEVLLQAAIHCGVPAANHAFALARPILEEQAAEAGAAPAASPG
>Mature_137_residues
MHEDERYQAGMRERRRLLGDAHVDRALAARSDFTEEFQDLITRYAWGSIWTRDGLPAHTRSLLTLAMMVALGHDEEFKLH
VRAARNNGVTPAQIKEVLLQAAIHCGVPAANHAFALARPILEEQAAEAGAAPAASPG

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 15033; Mature: 15033

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHEDERYQAGMRERRRLLGDAHVDRALAARSDFTEEFQDLITRYAWGSIWTRDGLPAHTR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHH
SLLTLAMMVALGHDEEFKLHVRAARNNGVTPAQIKEVLLQAAIHCGVPAANHAFALARPI
HHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LEEQAAEAGAAPAASPG
HHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MHEDERYQAGMRERRRLLGDAHVDRALAARSDFTEEFQDLITRYAWGSIWTRDGLPAHTR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHH
SLLTLAMMVALGHDEEFKLHVRAARNNGVTPAQIKEVLLQAAIHCGVPAANHAFALARPI
HHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LEEQAAEAGAAPAASPG
HHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]