Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is catD [H]
Identifier: 84622109
GI number: 84622109
Start: 491218
End: 492000
Strand: Direct
Name: catD [H]
Synonym: XOO_0452
Alternate gene names: 84622109
Gene position: 491218-492000 (Clockwise)
Preceding gene: 84622108
Following gene: 84622110
Centisome position: 9.94
GC content: 66.41
Gene sequence:
>783_bases ATGGCTTATCTCCGGTTGCCCACGCATCGCCTGCATTACCGCCTGGACGGCACCGAAGGGCGCCCCTGGCTGACCTTCTG CAATTCGCTTGGCACCGACCTGCATCTGTGGGACGTGCAGATCGAAGCCTTCGCCCCGCATTACCGCATCCTGCGCTATG ACCGCCGTGGCCATGGCGATTCGGAGACGCCGCCGGGTCCGTACAGCGTCGCCGATCTGGGCCAAGACGTGCTGGCGCTA TGGGACGCGTTGGAGATCGCGCAAAGCGATTTCTGCGGCCTCTCGATCGGCGGCCTGACTGGCCAATGGCTGGGCCTGCA TGTACCGCACCGCTTGCGCCGACTGGTGGTATGCGCCACCGCGAAGAAGATTGGCAGCGCAGCCACCTGGGAAAGCCGCA TCGAACAGGTGCGCAGCGAAGGCCTGCCGGTGCTGATCGATGCCACGTTGCAGCGCTGGTTTACGCCGGAATTCGCCATC AGCCACGCGCAGCGCCTGGACATGATCGCCGCCGCCTTCGTGTCCACCTCGCCGGCCGGCTACATCGCCTGTTGCCAGGC GCTGGCGGACGCGGATTTCCGCGGCGCACTGGACGGGCTGAGCGTTCCGCTGCTCGCGCTGGCCGGCGACGATGACCCGG TGTGCCCGCCATCTGATTTGCGCGAGATCGCCTATGCCGCGCCGGACGGTCATTACGCCCAGGTACCCGGCCGCCACATC TGCAACCTGGAATCGCCGGCCGCGTTCAACGACGCGGTGCTCGGCTTTCTTCAGGCCGACTGA
Upstream 100 bases:
>100_bases AACTGCAAGCCGTGTTCGATAGCAGATAGTTGGCGCGGCATGTCCTCGGTCTGGATCGACCGCGTGCTGGCCGGATCTCC TTCCTGTTGACGGTGCTTCG
Downstream 100 bases:
>100_bases GCTGCCCACCTTGCAAGGACACCCCATGCACGAAGACGAACGTTATCAAGCCGGCATGCGTGAGCGCCGGCGCCTCCTGG GCGATGCGCATGTCGACCGC
Product: b-ketoadipate enol-lactone hydrolase
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MAYLRLPTHRLHYRLDGTEGRPWLTFCNSLGTDLHLWDVQIEAFAPHYRILRYDRRGHGDSETPPGPYSVADLGQDVLAL WDALEIAQSDFCGLSIGGLTGQWLGLHVPHRLRRLVVCATAKKIGSAATWESRIEQVRSEGLPVLIDATLQRWFTPEFAI SHAQRLDMIAAAFVSTSPAGYIACCQALADADFRGALDGLSVPLLALAGDDDPVCPPSDLREIAYAAPDGHYAQVPGRHI CNLESPAAFNDAVLGFLQAD
Sequences:
>Translated_260_residues MAYLRLPTHRLHYRLDGTEGRPWLTFCNSLGTDLHLWDVQIEAFAPHYRILRYDRRGHGDSETPPGPYSVADLGQDVLAL WDALEIAQSDFCGLSIGGLTGQWLGLHVPHRLRRLVVCATAKKIGSAATWESRIEQVRSEGLPVLIDATLQRWFTPEFAI SHAQRLDMIAAAFVSTSPAGYIACCQALADADFRGALDGLSVPLLALAGDDDPVCPPSDLREIAYAAPDGHYAQVPGRHI CNLESPAAFNDAVLGFLQAD >Mature_259_residues AYLRLPTHRLHYRLDGTEGRPWLTFCNSLGTDLHLWDVQIEAFAPHYRILRYDRRGHGDSETPPGPYSVADLGQDVLALW DALEIAQSDFCGLSIGGLTGQWLGLHVPHRLRRLVVCATAKKIGSAATWESRIEQVRSEGLPVLIDATLQRWFTPEFAIS HAQRLDMIAAAFVSTSPAGYIACCQALADADFRGALDGLSVPLLALAGDDDPVCPPSDLREIAYAAPDGHYAQVPGRHIC NLESPAAFNDAVLGFLQAD
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787244, Length=236, Percent_Identity=24.5762711864407, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 28427; Mature: 28296
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYLRLPTHRLHYRLDGTEGRPWLTFCNSLGTDLHLWDVQIEAFAPHYRILRYDRRGHGD CCEEECCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEEEEEECCCCEEEEEECCCCCCC SETPPGPYSVADLGQDVLALWDALEIAQSDFCGLSIGGLTGQWLGLHVPHRLRRLVVCAT CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHEECCHHHHHHHHHHHH AKKIGSAATWESRIEQVRSEGLPVLIDATLQRWFTPEFAISHAQRLDMIAAAFVSTSPAG HHHHCCCHHHHHHHHHHHHCCCCEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCH YIACCQALADADFRGALDGLSVPLLALAGDDDPVCPPSDLREIAYAAPDGHYAQVPGRHI HHHHHHHHHCCCHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEECCCCCEE CNLESPAAFNDAVLGFLQAD CCCCCCCCCCHHHHEEEECC >Mature Secondary Structure AYLRLPTHRLHYRLDGTEGRPWLTFCNSLGTDLHLWDVQIEAFAPHYRILRYDRRGHGD CEEECCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEEEEEECCCCEEEEEECCCCCCC SETPPGPYSVADLGQDVLALWDALEIAQSDFCGLSIGGLTGQWLGLHVPHRLRRLVVCAT CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHEECCHHHHHHHHHHHH AKKIGSAATWESRIEQVRSEGLPVLIDATLQRWFTPEFAISHAQRLDMIAAAFVSTSPAG HHHHCCCHHHHHHHHHHHHCCCCEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCH YIACCQALADADFRGALDGLSVPLLALAGDDDPVCPPSDLREIAYAAPDGHYAQVPGRHI HHHHHHHHHCCCHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEECCCCCEE CNLESPAAFNDAVLGFLQAD CCCCCCCCCCHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8125318; 670169 [H]