Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is yedA [C]
Identifier: 84622062
GI number: 84622062
Start: 437676
End: 438074
Strand: Direct
Name: yedA [C]
Synonym: XOO_0405
Alternate gene names: 84622062
Gene position: 437676-438074 (Clockwise)
Preceding gene: 84622060
Following gene: 84622063
Centisome position: 8.86
GC content: 67.17
Gene sequence:
>399_bases ATGTCTTCCTCTCACGATGCTGCCGCGCCTGCGCGCAGCGGGTTAGTCGTTCTCGCCGTGTTGCTGGTCTACGTGGTGTG GGGCTCGACCTATCTGGCGATCCGCGTTGCGCTGGAAAGTGGTGCGCAGCCGCTGACGATGGTGTCCGGCATACGTTTCA TCGTCGCCGGTAGCGTGCTCTACAGCGTGCTGCGCTGGCGCAGTGTGGCTGCGCCCACGCGCGCGCAATGGAAGAACGTG GCGCTGATGGGCGCGGCATTGTTGCTGCTGGGCAACGGTATGGTGGTGTCGGCCGGGCGCAGCGTGTCGTCCGGGCTGGC CGCCACGGCGGTGGCGACGGTGCCGTCGGTGCATTGCGCGGGCAGCATGCCAGCGGCGGCGAATGGTTGGGCATTGTGA
Upstream 100 bases:
>100_bases TGCACCATAGCGCGATAGACGGCTGCCGGTTGTGTGCGACGAGGGCGTGTGCATGTGCTCTAGAATTGAGGTTTCCGCTG TACTGCCCGGCACGATTCCG
Downstream 100 bases:
>100_bases TCGGCTTTGTGGGCATGGTGTGGTTCAACGCCAGCACCCGTTTGACCGCGACGCCGGGTGGGTTGGTGTTGCTGCTGATC GCACCGATCGGCTGGGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MSSSHDAAAPARSGLVVLAVLLVYVVWGSTYLAIRVALESGAQPLTMVSGIRFIVAGSVLYSVLRWRSVAAPTRAQWKNV ALMGAALLLLGNGMVVSAGRSVSSGLAATAVATVPSVHCAGSMPAAANGWAL
Sequences:
>Translated_132_residues MSSSHDAAAPARSGLVVLAVLLVYVVWGSTYLAIRVALESGAQPLTMVSGIRFIVAGSVLYSVLRWRSVAAPTRAQWKNV ALMGAALLLLGNGMVVSAGRSVSSGLAATAVATVPSVHCAGSMPAAANGWAL >Mature_131_residues SSSHDAAAPARSGLVVLAVLLVYVVWGSTYLAIRVALESGAQPLTMVSGIRFIVAGSVLYSVLRWRSVAAPTRAQWKNVA LMGAALLLLGNGMVVSAGRSVSSGLAATAVATVPSVHCAGSMPAAANGWAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13377; Mature: 13246
Theoretical pI: Translated: 11.30; Mature: 11.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSHDAAAPARSGLVVLAVLLVYVVWGSTYLAIRVALESGAQPLTMVSGIRFIVAGSVL CCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHEEHHHCCCCCHHHHHHHHHHHHHHHH YSVLRWRSVAAPTRAQWKNVALMGAALLLLGNGMVVSAGRSVSSGLAATAVATVPSVHCA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHCCCCCCC GSMPAAANGWAL CCCCCCCCCCCC >Mature Secondary Structure SSSHDAAAPARSGLVVLAVLLVYVVWGSTYLAIRVALESGAQPLTMVSGIRFIVAGSVL CCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHEEHHHCCCCCHHHHHHHHHHHHHHHH YSVLRWRSVAAPTRAQWKNVALMGAALLLLGNGMVVSAGRSVSSGLAATAVATVPSVHCA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHCCCCCCC GSMPAAANGWAL CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA