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The map label for this gene is yedA [H]

Identifier: 84622063

GI number: 84622063

Start: 438071

End: 438550

Strand: Direct

Name: yedA [H]

Synonym: XOO_0406

Alternate gene names: 84622063

Gene position: 438071-438550 (Clockwise)

Preceding gene: 84622062

Following gene: 84622064

Centisome position: 8.87

GC content: 67.5

Gene sequence:

>480_bases
GTGATCGGCTTTGTGGGCATGGTGTGGTTCAACGCCAGCACCCGTTTGACCGCGACGCCGGGTGGGTTGGTGTTGCTGCT
GATCGCACCGATCGGCTGGGCGTTCGGCTCGGTGTGGTCGTGCGGACGCGATCTGCCGTCGCCGTTCATGACCGCCGCTG
GACAGATGCTGTGCGGTGGCGTGCTGCTGGTCAGCACCGGCTTGCTGATCGGCGAGCGCCCACAGGCATGGCCGAGCCCG
CAAGGCGTGTTGGCCGTGGCATACCGATGGGTGTTCGGCGCGATCGTGGCGTTCACCGCTTACGTGGGGTTGCTGCATCA
CGTGCGTCCGGCCTTGGCCGGCAGCTACGCCTACCCGGTGATTGCGGTGAGCCTGGGCGCCTGGCTGGGCCAGGAGCGCT
TCCGCGCGCAGGACATCGCTGCGATGGCGGTGATCCTGGCGGGCGTGTTGGTAGTCATCTTCGCCAAGGCGCGGCGATGA

Upstream 100 bases:

>100_bases
GGCGCAGCGTGTCGTCCGGGCTGGCCGCCACGGCGGTGGCGACGGTGCCGTCGGTGCATTGCGCGGGCAGCATGCCAGCG
GCGGCGAATGGTTGGGCATT

Downstream 100 bases:

>100_bases
GCACGGTCTCGCCACAGGAGGCGCGGCGCGGGCTACTGATCACCGCGTCCACCTTCGTGCTGTGGGGGCTGGTGCCGCTG
TATTGGCATCTGCTCAAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MIGFVGMVWFNASTRLTATPGGLVLLLIAPIGWAFGSVWSCGRDLPSPFMTAAGQMLCGGVLLVSTGLLIGERPQAWPSP
QGVLAVAYRWVFGAIVAFTAYVGLLHHVRPALAGSYAYPVIAVSLGAWLGQERFRAQDIAAMAVILAGVLVVIFAKARR

Sequences:

>Translated_159_residues
MIGFVGMVWFNASTRLTATPGGLVLLLIAPIGWAFGSVWSCGRDLPSPFMTAAGQMLCGGVLLVSTGLLIGERPQAWPSP
QGVLAVAYRWVFGAIVAFTAYVGLLHHVRPALAGSYAYPVIAVSLGAWLGQERFRAQDIAAMAVILAGVLVVIFAKARR
>Mature_159_residues
MIGFVGMVWFNASTRLTATPGGLVLLLIAPIGWAFGSVWSCGRDLPSPFMTAAGQMLCGGVLLVSTGLLIGERPQAWPSP
QGVLAVAYRWVFGAIVAFTAYVGLLHHVRPALAGSYAYPVIAVSLGAWLGQERFRAQDIAAMAVILAGVLVVIFAKARR

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1788269, Length=157, Percent_Identity=42.6751592356688, Blast_Score=108, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 16799; Mature: 16799

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGFVGMVWFNASTRLTATPGGLVLLLIAPIGWAFGSVWSCGRDLPSPFMTAAGQMLCGG
CCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
VLLVSTGLLIGERPQAWPSPQGVLAVAYRWVFGAIVAFTAYVGLLHHVRPALAGSYAYPV
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
IAVSLGAWLGQERFRAQDIAAMAVILAGVLVVIFAKARR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIGFVGMVWFNASTRLTATPGGLVLLLIAPIGWAFGSVWSCGRDLPSPFMTAAGQMLCGG
CCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
VLLVSTGLLIGERPQAWPSPQGVLAVAYRWVFGAIVAFTAYVGLLHHVRPALAGSYAYPV
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
IAVSLGAWLGQERFRAQDIAAMAVILAGVLVVIFAKARR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]