The gene/protein map for NC_007705 is currently unavailable.
Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

Click here to switch to the map view.

The map label for this gene is ycbL [C]

Identifier: 84622059

GI number: 84622059

Start: 433499

End: 434515

Strand: Direct

Name: ycbL [C]

Synonym: XOO_0402

Alternate gene names: 84622059

Gene position: 433499-434515 (Clockwise)

Preceding gene: 84622058

Following gene: 84622060

Centisome position: 8.77

GC content: 63.91

Gene sequence:

>1017_bases
GTGGCGACATGCATCACAGCGACGCAATGCTTGGGCCTACACTGCAGTCTCTACAACCGCCGCGGGGTGCGAATGACAGT
GACAGCCGAGTTCAACATCCACACCATCGATACCGGCTTTGGTGGTGTGCAATTCGATGCAGCGTATTTGATCGTCCAAG
CGCAACGCGGCGCCTTGATCGATTGCGGCACCTCGCTGTCGGTGCCACAGATGCTGGCCGCGGTGCAGGCGGCCGGGTTG
GCGCCGGCGCAGATAGAGTGGTTGATCCTGACCCATGTACATCTGGATCATGCCGGCGGTGCCGGGACCTTGTTGCAGCA
CCTGCCCAATGCGCAGGCGCTGGTGCATCCGCGCGGTGCACCGCATCTGATCGACCCCACACGGCTGATTGCCGGCGCCA
CCGCGGTGTATGGCGAGGCGGAAATGGCGCGCAGTTACGGTGTCATTGCGCCGGTGCCGGCCGAGCGCGTGGTCGAGGCG
GTCGATGGGTACACGGTGATGCTGGGCGCGCGCGCGCTGCGCACGATCGATACCCCGGGGCATGCACGCCATCATCTGTG
CGTGTGGGATGCGCGTAGCCGCAGCTGGTTTACCGGTGATACCTTCGGCCTGTCGTATCGGCAACTGGACAGTGCCCGGG
GTGCCTTCATCCTGCCCACCTCGTCGCCGGTACAGTTCGAGCCCGAGGCGATGCTGCAGTCGATGACGCGCCTGATGGAC
GCCGCACCGGAGGCGATGTATCTCACCCATTACGGCCGTGTCACATCGCCGGCACCGTTGGCGCAGGCGCTAGGCGAGCA
GATTCATGCGATGACCGAGATTGCGCTGGGTTGCGCGCAACGTCCGGACCGGCATCGCTGCATGGTGGCGGCGTTGACCG
AATTGTATTTGGAACGCGCACGCCAGCATGGATGTCGGTTGGACGATGCGGCCGTGGAGCAACTGCTGGCAACGGATATC
GAACTCAACGCGCAAGGGCTGGGGTTTTGGCTGGATCGTGCAGCGCGACCAAGTTAG

Upstream 100 bases:

>100_bases
GACGTGATTCTTGCGGCGATGCACGCATTGCGCGAGGCATGATCGACATGACGCTGCAGGCGTCGCTGTTCGCCATGGCT
AGCCGCATTCTGGGGTGCCT

Downstream 100 bases:

>100_bases
CGCTCCGGGAGCGGCTGATATGTCCTCTCGACCGCTGTAGCGAATTGTCACGTCGTTTAAAGCCAGTCAGTCGAATGCGC
GGTGCCCTCGCCGCTTGCAG

Product: beta-lactamase related protein

Products: NA

Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase-Like Protein; Zn-Dependent Hydrolase; Beta-Lactamase Related Protein; Beta-Lactamase-Like; Metallo-Beta-Lactamase Family Hydrolase; Metallo-Beta-Lactamase-Related Protein; Zn-Dependent Hydrolase Including Glyoxylase; Metallo Beta-Lactamase Protein; Zn-Dependent Hydrolase Glyoxylase; Metallo-Beta-Lactamase Domain Protein; Hydrolase; Metallo-Beta-Lactamase; Zn-Dependent Hydrolases Including Glyoxylases; Hydroxyacylglutathione Hydrolase; Zinc-Dependant Hydrolase; Metallo-Beta-Lactamase Related Protein

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MATCITATQCLGLHCSLYNRRGVRMTVTAEFNIHTIDTGFGGVQFDAAYLIVQAQRGALIDCGTSLSVPQMLAAVQAAGL
APAQIEWLILTHVHLDHAGGAGTLLQHLPNAQALVHPRGAPHLIDPTRLIAGATAVYGEAEMARSYGVIAPVPAERVVEA
VDGYTVMLGARALRTIDTPGHARHHLCVWDARSRSWFTGDTFGLSYRQLDSARGAFILPTSSPVQFEPEAMLQSMTRLMD
AAPEAMYLTHYGRVTSPAPLAQALGEQIHAMTEIALGCAQRPDRHRCMVAALTELYLERARQHGCRLDDAAVEQLLATDI
ELNAQGLGFWLDRAARPS

Sequences:

>Translated_338_residues
MATCITATQCLGLHCSLYNRRGVRMTVTAEFNIHTIDTGFGGVQFDAAYLIVQAQRGALIDCGTSLSVPQMLAAVQAAGL
APAQIEWLILTHVHLDHAGGAGTLLQHLPNAQALVHPRGAPHLIDPTRLIAGATAVYGEAEMARSYGVIAPVPAERVVEA
VDGYTVMLGARALRTIDTPGHARHHLCVWDARSRSWFTGDTFGLSYRQLDSARGAFILPTSSPVQFEPEAMLQSMTRLMD
AAPEAMYLTHYGRVTSPAPLAQALGEQIHAMTEIALGCAQRPDRHRCMVAALTELYLERARQHGCRLDDAAVEQLLATDI
ELNAQGLGFWLDRAARPS
>Mature_337_residues
ATCITATQCLGLHCSLYNRRGVRMTVTAEFNIHTIDTGFGGVQFDAAYLIVQAQRGALIDCGTSLSVPQMLAAVQAAGLA
PAQIEWLILTHVHLDHAGGAGTLLQHLPNAQALVHPRGAPHLIDPTRLIAGATAVYGEAEMARSYGVIAPVPAERVVEAV
DGYTVMLGARALRTIDTPGHARHHLCVWDARSRSWFTGDTFGLSYRQLDSARGAFILPTSSPVQFEPEAMLQSMTRLMDA
APEAMYLTHYGRVTSPAPLAQALGEQIHAMTEIALGCAQRPDRHRCMVAALTELYLERARQHGCRLDDAAVEQLLATDIE
LNAQGLGFWLDRAARPS

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36535; Mature: 36404

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATCITATQCLGLHCSLYNRRGVRMTVTAEFNIHTIDTGFGGVQFDAAYLIVQAQRGALI
CCCEEEHHHHHHHEEEEECCCCEEEEEEEEEEEEEEECCCCCEEEEEEEEEEEECCCCEE
DCGTSLSVPQMLAAVQAAGLAPAQIEWLILTHVHLDHAGGAGTLLQHLPNAQALVHPRGA
ECCCCCCHHHHHHHHHHCCCCCHHEEEEEEEEEEEECCCCHHHHHHHCCCCCEEECCCCC
PHLIDPTRLIAGATAVYGEAEMARSYGVIAPVPAERVVEAVDGYTVMLGARALRTIDTPG
CCCCCHHHHHHCCHHHHCCHHHHHHCCCCCCCCHHHHHHHHCCEEEEECHHHHHHCCCCC
HARHHLCVWDARSRSWFTGDTFGLSYRQLDSARGAFILPTSSPVQFEPEAMLQSMTRLMD
CCCCEEEEEECCCCCEECCCCCCCHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHH
AAPEAMYLTHYGRVTSPAPLAQALGEQIHAMTEIALGCAQRPDRHRCMVAALTELYLERA
CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
RQHGCRLDDAAVEQLLATDIELNAQGLGFWLDRAARPS
HHCCCCCCHHHHHHHHHHCCEECCCCCHHHHHCCCCCC
>Mature Secondary Structure 
ATCITATQCLGLHCSLYNRRGVRMTVTAEFNIHTIDTGFGGVQFDAAYLIVQAQRGALI
CCEEEHHHHHHHEEEEECCCCEEEEEEEEEEEEEEECCCCCEEEEEEEEEEEECCCCEE
DCGTSLSVPQMLAAVQAAGLAPAQIEWLILTHVHLDHAGGAGTLLQHLPNAQALVHPRGA
ECCCCCCHHHHHHHHHHCCCCCHHEEEEEEEEEEEECCCCHHHHHHHCCCCCEEECCCCC
PHLIDPTRLIAGATAVYGEAEMARSYGVIAPVPAERVVEAVDGYTVMLGARALRTIDTPG
CCCCCHHHHHHCCHHHHCCHHHHHHCCCCCCCCHHHHHHHHCCEEEEECHHHHHHCCCCC
HARHHLCVWDARSRSWFTGDTFGLSYRQLDSARGAFILPTSSPVQFEPEAMLQSMTRLMD
CCCCEEEEEECCCCCEECCCCCCCHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHH
AAPEAMYLTHYGRVTSPAPLAQALGEQIHAMTEIALGCAQRPDRHRCMVAALTELYLERA
CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
RQHGCRLDDAAVEQLLATDIELNAQGLGFWLDRAARPS
HHCCCCCCHHHHHHHHHHCCEECCCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA