Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is yfcG [H]
Identifier: 84622017
GI number: 84622017
Start: 390281
End: 390970
Strand: Direct
Name: yfcG [H]
Synonym: XOO_0360
Alternate gene names: 84622017
Gene position: 390281-390970 (Clockwise)
Preceding gene: 84622016
Following gene: 84622018
Centisome position: 7.9
GC content: 63.04
Gene sequence:
>690_bases ATGATTGATCTGTACTACTGGCCCACGCCCAATGGCCACAAAGTCACCTTGTTCCTGGAAGAGGCCGGGCTGAAGTACAC CGTCAAGCCGGTCAATATCGGCAAGGGCGAACAATTCGAGCCGGCGTTCCTGCAGATTTCGCCCAACAACAAGATGCCGG CCATCGTCGACCATGCACCGGTCGATGGCGGCGGCGCGCAGAGCGTGTTCGAATCCGGCGCGATCCTGCTGTACTTGGCC GAGAGGACTGGCCGCTTTCTGCCGCGCGATGCGCGCGGCCGCATCGCTGCGCTGGAGTGGTTGTTCTGGCAGATGGGCGG GCTGGGCCCGATGAGCGGGCAGATGGGCCACTTCAACGTGTATGCACCGGAAAAGATTCCGTACGCGATCGAGCGCTACA CCGCCGAGGTGCGCCGCCTGCATGGCGTGCTCGACAAGCGTCTGGCTGATCACGCCTTCTTGGCGGGCAACGATTACGGC ATCGCCGACATGGCCAGCTATCCGTGGATCGAAGTGTATGGCGACCTCCAGCCGGACTATTCCGCCTTCCCGCATCTGAA GCGCTGGCACGACGCCATCGCCGCCCGCCCCGCCACCCAGCGTGCCTACGCACTCAAGGACCAGGTCAATCCCAATGCCG GCAAGCCGCTCAGCGATGAGGAGCGCAAACACCTGTTCGGTAAGCGCTGA
Upstream 100 bases:
>100_bases AGGTGGACCAGATGCATTGCCGGGTTCGATGCCTGCACGCCGAAGACCGTCACCTTGTTGTGTCTTGCCGTTACGACCCC ACCTGTGACTGGAGCGCACG
Downstream 100 bases:
>100_bases AGGCCCAGTCGTAACAGCAGAGCAGGCATAGCCGCGCAACAGGATCGCTGAAGCCCCTTCGACATCGGGAGAGCAGCGCA AGAAGTTCCTCCCCCGCCGG
Product: glutathione S-transferase
Products: NA
Alternate protein names: GST-like protein yfcG [H]
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MIDLYYWPTPNGHKVTLFLEEAGLKYTVKPVNIGKGEQFEPAFLQISPNNKMPAIVDHAPVDGGGAQSVFESGAILLYLA ERTGRFLPRDARGRIAALEWLFWQMGGLGPMSGQMGHFNVYAPEKIPYAIERYTAEVRRLHGVLDKRLADHAFLAGNDYG IADMASYPWIEVYGDLQPDYSAFPHLKRWHDAIAARPATQRAYALKDQVNPNAGKPLSDEERKHLFGKR
Sequences:
>Translated_229_residues MIDLYYWPTPNGHKVTLFLEEAGLKYTVKPVNIGKGEQFEPAFLQISPNNKMPAIVDHAPVDGGGAQSVFESGAILLYLA ERTGRFLPRDARGRIAALEWLFWQMGGLGPMSGQMGHFNVYAPEKIPYAIERYTAEVRRLHGVLDKRLADHAFLAGNDYG IADMASYPWIEVYGDLQPDYSAFPHLKRWHDAIAARPATQRAYALKDQVNPNAGKPLSDEERKHLFGKR >Mature_229_residues MIDLYYWPTPNGHKVTLFLEEAGLKYTVKPVNIGKGEQFEPAFLQISPNNKMPAIVDHAPVDGGGAQSVFESGAILLYLA ERTGRFLPRDARGRIAALEWLFWQMGGLGPMSGQMGHFNVYAPEKIPYAIERYTAEVRRLHGVLDKRLADHAFLAGNDYG IADMASYPWIEVYGDLQPDYSAFPHLKRWHDAIAARPATQRAYALKDQVNPNAGKPLSDEERKHLFGKR
Specific function: Has disulfide bond reductase activity (in vitro). Has low hydroperoxidase activity with cumene hydroperoxide. Has very low glutathione-S-transferase activity (in vitro) [H]
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788640, Length=209, Percent_Identity=59.3301435406699, Blast_Score=255, Evalue=2e-69, Organism=Escherichia coli, GI87082195, Length=226, Percent_Identity=42.9203539823009, Blast_Score=174, Evalue=6e-45, Organism=Saccharomyces cerevisiae, GI6324100, Length=232, Percent_Identity=32.3275862068966, Blast_Score=111, Evalue=7e-26, Organism=Drosophila melanogaster, GI17864592, Length=194, Percent_Identity=27.319587628866, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI28571670, Length=174, Percent_Identity=26.4367816091954, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI17864594, Length=203, Percent_Identity=26.6009852216749, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI17864598, Length=200, Percent_Identity=26.5, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI17933730, Length=193, Percent_Identity=26.4248704663212, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI24646249, Length=195, Percent_Identity=25.6410256410256, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 25726; Mature: 25726
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDLYYWPTPNGHKVTLFLEEAGLKYTVKPVNIGKGEQFEPAFLQISPNNKMPAIVDHAP CCEEEECCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCEEEECCC VDGGGAQSVFESGAILLYLAERTGRFLPRDARGRIAALEWLFWQMGGLGPMSGQMGHFNV CCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEE YAPEKIPYAIERYTAEVRRLHGVLDKRLADHAFLAGNDYGIADMASYPWIEVYGDLQPDY ECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHCCCCEEEEECCCCCCH SAFPHLKRWHDAIAARPATQRAYALKDQVNPNAGKPLSDEERKHLFGKR HHCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCC >Mature Secondary Structure MIDLYYWPTPNGHKVTLFLEEAGLKYTVKPVNIGKGEQFEPAFLQISPNNKMPAIVDHAP CCEEEECCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCEEEECCC VDGGGAQSVFESGAILLYLAERTGRFLPRDARGRIAALEWLFWQMGGLGPMSGQMGHFNV CCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEE YAPEKIPYAIERYTAEVRRLHGVLDKRLADHAFLAGNDYGIADMASYPWIEVYGDLQPDY ECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHCCCCEEEEECCCCCCH SAFPHLKRWHDAIAARPATQRAYALKDQVNPNAGKPLSDEERKHLFGKR HHCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]