Click here to switch to the map view.

The map label for this gene is 84622016

Identifier: 84622016

GI number: 84622016

Start: 389626

End: 390012

Strand: Direct

Name: 84622016

Synonym: XOO_0359

Alternate gene names: NA

Gene position: 389626-390012 (Clockwise)

Preceding gene: 84622015

Following gene: 84622017

Centisome position: 7.89

GC content: 58.14

Gene sequence:

>387_bases
ATGGTTGCCGCAGATGCTCGAACAGCCATCACGTTCGGATTGACGCCTGGCAACGCACCTGACGCACCCGCAGGCCGCGC
GTTGCTTGAACACCTGGGGCCAGTGGAGCGGCCGGTTCATCTGCTGATGGATCGCGCTTACGAAGGCAATGAAACCCGCC
AGTTGGCGCTCGATCTTGGCTTCGTGCCGGTGGTTCCACCCAAGTCCAATCGGGTCGATCCTTGGGAGTACGACAAGGAA
ATGTACAAGCGGCGCAACGAAGTGGAGAGGCTGTTCCGTCGCTTGAAGGGCTACCGACGGATTTTCACGCGCTTCGAGAA
GCTGGATGTCATGTTCCTTGGCTTCCTCAGCTTCGTTCTGGTCGTTGATGGGCTTCGGATGTGTTAA

Upstream 100 bases:

>100_bases
CCACCAGCATCAAGGTGCATCCGGATGGCACTGGCGCATTAAAAAAAACGGCCCACAATCCATCGGGAAATCGCGCGGCG
GATGGAACACCAAAATTCAT

Downstream 100 bases:

>100_bases
CAGGCCCTAATCACGTCACACAGCGGTCCATTGCGTTCGGTTTGCCGCCTATCGGCCTGCAATCGCTTGGCCGTACCATC
GAGCATCGAGGGCAACGTCT

Product: ISXoo11 transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; Transposase IS4 Family; Transposase And Inactivated Derivatives-Like Protein; IS4 Insertion Sequence Transposase Protein; Transposase-Like Protein; ISXoo11 Transposase; IS5 Family Transposase

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MVAADARTAITFGLTPGNAPDAPAGRALLEHLGPVERPVHLLMDRAYEGNETRQLALDLGFVPVVPPKSNRVDPWEYDKE
MYKRRNEVERLFRRLKGYRRIFTRFEKLDVMFLGFLSFVLVVDGLRMC

Sequences:

>Translated_128_residues
MVAADARTAITFGLTPGNAPDAPAGRALLEHLGPVERPVHLLMDRAYEGNETRQLALDLGFVPVVPPKSNRVDPWEYDKE
MYKRRNEVERLFRRLKGYRRIFTRFEKLDVMFLGFLSFVLVVDGLRMC
>Mature_128_residues
MVAADARTAITFGLTPGNAPDAPAGRALLEHLGPVERPVHLLMDRAYEGNETRQLALDLGFVPVVPPKSNRVDPWEYDKE
MYKRRNEVERLFRRLKGYRRIFTRFEKLDVMFLGFLSFVLVVDGLRMC

Specific function: Unknown

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14723; Mature: 14723

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAADARTAITFGLTPGNAPDAPAGRALLEHLGPVERPVHLLMDRAYEGNETRQLALDLG
CCCCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHCC
FVPVVPPKSNRVDPWEYDKEMYKRRNEVERLFRRLKGYRRIFTRFEKLDVMFLGFLSFVL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVDGLRMC
HHHHHHCC
>Mature Secondary Structure
MVAADARTAITFGLTPGNAPDAPAGRALLEHLGPVERPVHLLMDRAYEGNETRQLALDLG
CCCCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHCC
FVPVVPPKSNRVDPWEYDKEMYKRRNEVERLFRRLKGYRRIFTRFEKLDVMFLGFLSFVL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVDGLRMC
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA