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The map label for this gene is hfoA1 [H]

Identifier: 84489423

GI number: 84489423

Start: 718207

End: 718416

Strand: Direct

Name: hfoA1 [H]

Synonym: Msp_0614

Alternate gene names: 84489423

Gene position: 718207-718416 (Clockwise)

Preceding gene: 84489420

Following gene: 84489424

Centisome position: 40.64

GC content: 36.19

Gene sequence:

>210_bases
ATGGAGACTTTACCTATTGCACCAATTGGTAGAATTCTATCAAATGCAGGTGCACCTAGAGCAACAAAAGATGCAAAAGT
AGAATTATCCCAACAATTAACAGAATTAGGGGAAATTATAGCTGACGAAGCTGTAGCTATTGCAAAGCATTCTGGTAGAA
AAACAGTGAAAGCATCTGATGTTGAACTAGCGGTAAAACTCAAATTTTAA

Upstream 100 bases:

>100_bases
TTAATTCCTATATTTGGTATTGAAAACTTAATAATTATATACAACTAAAAACAATACATATAAATACTATAAAAATATAT
TTTTGTATAGGAGTGATATT

Downstream 100 bases:

>100_bases
AATTCTAAAAAAAAATTAAATCAACCATAAAAATTCAAAAATATTTTTTTTTATAATGAGGCAAATAACACAACATCTAA
AAATATATGTTTTTTAAACC

Product: histone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 69; Mature: 69

Protein sequence:

>69_residues
METLPIAPIGRILSNAGAPRATKDAKVELSQQLTELGEIIADEAVAIAKHSGRKTVKASDVELAVKLKF

Sequences:

>Translated_69_residues
METLPIAPIGRILSNAGAPRATKDAKVELSQQLTELGEIIADEAVAIAKHSGRKTVKASDVELAVKLKF
>Mature_69_residues
METLPIAPIGRILSNAGAPRATKDAKVELSQQLTELGEIIADEAVAIAKHSGRKTVKASDVELAVKLKF

Specific function: Binds and compact DNA (95 to 150 base pairs) to form nucleosome-like structures that contain positive DNA supercoils [H]

COG id: COG2036

COG function: function code B; Histones H3 and H4

Gene ontology:

Cell location: Cytoplasm (Potential). Chromosome (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the archaeal histone HMF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003958
- InterPro:   IPR009072 [H]

Pfam domain/function: PF00808 CBFD_NFYB_HMF [H]

EC number: NA

Molecular weight: Translated: 7311; Mature: 7311

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METLPIAPIGRILSNAGAPRATKDAKVELSQQLTELGEIIADEAVAIAKHSGRKTVKASD
CCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECC
VELAVKLKF
EEEEEEECC
>Mature Secondary Structure
METLPIAPIGRILSNAGAPRATKDAKVELSQQLTELGEIIADEAVAIAKHSGRKTVKASD
CCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECC
VELAVKLKF
EEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7836329 [H]