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The map label for this gene is ftsY [C]

Identifier: 84489410

GI number: 84489410

Start: 696252

End: 697904

Strand: Direct

Name: ftsY [C]

Synonym: Msp_0601

Alternate gene names: 84489410

Gene position: 696252-697904 (Clockwise)

Preceding gene: 84489409

Following gene: 84489413

Centisome position: 39.39

GC content: 29.1

Gene sequence:

>1653_bases
TTGTTTGATTTTATAAGAAAACGAATAAATAAGACTATTAAAGATGCATCAGATGCTATACCAGAAGAAGAAATGGAAAC
TAATGAAACAGATACTGAAATTGAAGAAAAAAATGATGTATCTACTGGAGAAAAAGAAATTACTACGGATACAGAAGTAT
CTGATGATAATTCAAAGAATATGGAAGAATCTGAAGAAGATGATAAAGAATCAGACGATGATAAAGAAGAAAATAAGGGA
ATGTTTAGCTTTTTTAGAAGAAATAATGATTCTGACAATGATGATGAGTCTAAATCATCTGATGAAAAACCATCTGAGGA
TATAGTTGGTGATAATCAAGTTAATAAAGGGGAAATTGTCGAATCAGGTGATGCTGATAAATCAAAAGATAATGATAAAG
AAGAAAATAAGGGAATGTTTAGTTTCTTTAGAAGAAATAATGATTCTGACAATGATGATGAGTCTAAATCATCTGATGAA
AAATCTTCTGATAATATAAATGATAATAATCAAGTTGATAAAGAGAATGTTGAATCTATAGAAATGGACGAAAAATCTGA
AGAAGAATCTGAATCTGTAGAAAAATCCAAAGAAACTTTAGATACAGAAGACGTTTTAGTAGAAAATCCACCAGATAATA
TTGAAAATAATGAAGATAAAAAAGAAGATAAAGGTCGTTTTGGATTTTTCAGTAGAAATAAAAATAAAGAAGCATCTAGC
AATCAAAAAGATGAAAAAGAAGAAGATAAGTCTGATGATGATTCTGGAAGATTCTCATTCATCACTAAAAAAACAATAAA
AGAAGAAGATATTGAAGATATTCTTGAAGAGTTAGAATTTTCATTAATTGAGGGTGATGTTGCATTTGATGTTGCAGAAA
GAATAGTTGAATCTGTAAAAGAAGATTTAATTGGTAAAAAAATTAAACGTCGAGGAGATATGGAACTATTCACAACTAAT
GCTCTTAAAAAAGCAATTACAGAAATTATTGACAATGGATATTATGATTTATTAGGTGATATTGAAAAATCAAAAGAAAA
AGGTGAACCATATAAAATAATGTTTGTTGGTATTAATGGTACTGGTAAAACAACAACAATTGCAAAAATTGCAACATATC
TTGAAAAACATGGATATTCATCAGTATTTGGTGCATCAGATACATTCAGAGCAGGAGCTATTGAACAATTAGAACATCAT
GCAAATAACTTAAATCTAAAAATTATTAAACATGAACGTAATTCTGATCCTGCAGCTGTAGCATTCGATGCTGTAGAACA
TGCAAAAGCTTCGGGTAAAGATGTTGTACTTATAGATACTTCTGGACGTATGCAAACAAATGCTAATTTAATGGATGAAA
TGAAAAAAATCAAACGTGTATCACAACCTGACATAGTAATCTATGTGGGTGATGCTCTAATGGGTAATGATGCTACAGAA
CAAGCATCTAAATTTAATGAAGTTATTGATATTGATGGTATTATTTTAACAAAAGCAGATGCTGATGCAAAAGGTGGTGC
AGCAATATCAATTGGTCATGTAATTCATAAACCAATATTATTTATTGGTACAGGTCAATCATATGATGATCTTATGGAAT
TTGAACCTGAATGGATGATAAATCAAATATTTAATGAGGAAGCAGAAGCTTAA

Upstream 100 bases:

>100_bases
CATATTAATTGATTTAATAAAGTATTATTAGTTATAAAAGTAATATATTTAATTAATAGATATTATTATATTTTTTAAAA
ATATAATGGATGTGAGGAGC

Downstream 100 bases:

>100_bases
CTCTTTAATTTCTTTTTTTTATAATTAGTTTAGAAAAAGTATATTTGGGGGAGAAAATTGAATTAGTTGGAAAAATAATT
TATTTTTTTGTTCCACCATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 550; Mature: 550

Protein sequence:

>550_residues
MFDFIRKRINKTIKDASDAIPEEEMETNETDTEIEEKNDVSTGEKEITTDTEVSDDNSKNMEESEEDDKESDDDKEENKG
MFSFFRRNNDSDNDDESKSSDEKPSEDIVGDNQVNKGEIVESGDADKSKDNDKEENKGMFSFFRRNNDSDNDDESKSSDE
KSSDNINDNNQVDKENVESIEMDEKSEEESESVEKSKETLDTEDVLVENPPDNIENNEDKKEDKGRFGFFSRNKNKEASS
NQKDEKEEDKSDDDSGRFSFITKKTIKEEDIEDILEELEFSLIEGDVAFDVAERIVESVKEDLIGKKIKRRGDMELFTTN
ALKKAITEIIDNGYYDLLGDIEKSKEKGEPYKIMFVGINGTGKTTTIAKIATYLEKHGYSSVFGASDTFRAGAIEQLEHH
ANNLNLKIIKHERNSDPAAVAFDAVEHAKASGKDVVLIDTSGRMQTNANLMDEMKKIKRVSQPDIVIYVGDALMGNDATE
QASKFNEVIDIDGIILTKADADAKGGAAISIGHVIHKPILFIGTGQSYDDLMEFEPEWMINQIFNEEAEA

Sequences:

>Translated_550_residues
MFDFIRKRINKTIKDASDAIPEEEMETNETDTEIEEKNDVSTGEKEITTDTEVSDDNSKNMEESEEDDKESDDDKEENKG
MFSFFRRNNDSDNDDESKSSDEKPSEDIVGDNQVNKGEIVESGDADKSKDNDKEENKGMFSFFRRNNDSDNDDESKSSDE
KSSDNINDNNQVDKENVESIEMDEKSEEESESVEKSKETLDTEDVLVENPPDNIENNEDKKEDKGRFGFFSRNKNKEASS
NQKDEKEEDKSDDDSGRFSFITKKTIKEEDIEDILEELEFSLIEGDVAFDVAERIVESVKEDLIGKKIKRRGDMELFTTN
ALKKAITEIIDNGYYDLLGDIEKSKEKGEPYKIMFVGINGTGKTTTIAKIATYLEKHGYSSVFGASDTFRAGAIEQLEHH
ANNLNLKIIKHERNSDPAAVAFDAVEHAKASGKDVVLIDTSGRMQTNANLMDEMKKIKRVSQPDIVIYVGDALMGNDATE
QASKFNEVIDIDGIILTKADADAKGGAAISIGHVIHKPILFIGTGQSYDDLMEFEPEWMINQIFNEEAEA
>Mature_550_residues
MFDFIRKRINKTIKDASDAIPEEEMETNETDTEIEEKNDVSTGEKEITTDTEVSDDNSKNMEESEEDDKESDDDKEENKG
MFSFFRRNNDSDNDDESKSSDEKPSEDIVGDNQVNKGEIVESGDADKSKDNDKEENKGMFSFFRRNNDSDNDDESKSSDE
KSSDNINDNNQVDKENVESIEMDEKSEEESESVEKSKETLDTEDVLVENPPDNIENNEDKKEDKGRFGFFSRNKNKEASS
NQKDEKEEDKSDDDSGRFSFITKKTIKEEDIEDILEELEFSLIEGDVAFDVAERIVESVKEDLIGKKIKRRGDMELFTTN
ALKKAITEIIDNGYYDLLGDIEKSKEKGEPYKIMFVGINGTGKTTTIAKIATYLEKHGYSSVFGASDTFRAGAIEQLEHH
ANNLNLKIIKHERNSDPAAVAFDAVEHAKASGKDVVLIDTSGRMQTNANLMDEMKKIKRVSQPDIVIYVGDALMGNDATE
QASKFNEVIDIDGIILTKADADAKGGAAISIGHVIHKPILFIGTGQSYDDLMEFEPEWMINQIFNEEAEA

Specific function: Probably involved in the signal sequence recognition [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI23308697, Length=297, Percent_Identity=38.3838383838384, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI295424842, Length=297, Percent_Identity=38.3838383838384, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI4507215, Length=284, Percent_Identity=32.0422535211268, Blast_Score=160, Evalue=4e-39,
Organism=Homo sapiens, GI226371618, Length=226, Percent_Identity=34.5132743362832, Blast_Score=149, Evalue=6e-36,
Organism=Homo sapiens, GI89061728, Length=130, Percent_Identity=36.1538461538462, Blast_Score=93, Evalue=6e-19,
Organism=Escherichia coli, GI1789874, Length=204, Percent_Identity=41.6666666666667, Blast_Score=166, Evalue=3e-42,
Organism=Escherichia coli, GI1788963, Length=283, Percent_Identity=31.095406360424, Blast_Score=160, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI193206261, Length=313, Percent_Identity=38.0191693290735, Blast_Score=206, Evalue=4e-53,
Organism=Caenorhabditis elegans, GI17539958, Length=286, Percent_Identity=31.8181818181818, Blast_Score=166, Evalue=2e-41,
Organism=Saccharomyces cerevisiae, GI6320498, Length=351, Percent_Identity=31.3390313390313, Blast_Score=171, Evalue=3e-43,
Organism=Saccharomyces cerevisiae, GI6325345, Length=284, Percent_Identity=34.1549295774648, Blast_Score=149, Evalue=1e-36,
Organism=Drosophila melanogaster, GI24641198, Length=340, Percent_Identity=35, Blast_Score=203, Evalue=3e-52,
Organism=Drosophila melanogaster, GI17647949, Length=286, Percent_Identity=32.1678321678322, Blast_Score=157, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 61934; Mature: 61934

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDFIRKRINKTIKDASDAIPEEEMETNETDTEIEEKNDVSTGEKEITTDTEVSDDNSKN
CHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCC
MEESEEDDKESDDDKEENKGMFSFFRRNNDSDNDDESKSSDEKPSEDIVGDNQVNKGEIV
CCHHHHCCCCCCCCHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEE
ESGDADKSKDNDKEENKGMFSFFRRNNDSDNDDESKSSDEKSSDNINDNNQVDKENVESI
ECCCCCCCCCCCCHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
EMDEKSEEESESVEKSKETLDTEDVLVENPPDNIENNEDKKEDKGRFGFFSRNKNKEASS
CCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCC
NQKDEKEEDKSDDDSGRFSFITKKTIKEEDIEDILEELEFSLIEGDVAFDVAERIVESVK
CCCCHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
EDLIGKKIKRRGDMELFTTNALKKAITEIIDNGYYDLLGDIEKSKEKGEPYKIMFVGING
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEEECC
TGKTTTIAKIATYLEKHGYSSVFGASDTFRAGAIEQLEHHANNLNLKIIKHERNSDPAAV
CCCHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHH
AFDAVEHAKASGKDVVLIDTSGRMQTNANLMDEMKKIKRVSQPDIVIYVGDALMGNDATE
HHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHCCCHHH
QASKFNEVIDIDGIILTKADADAKGGAAISIGHVIHKPILFIGTGQSYDDLMEFEPEWMI
HHHHHHHHEECCCEEEEECCCCCCCCCEEEHHHHHHCCEEEEECCCCHHHHHHCCHHHHH
NQIFNEEAEA
HHHHHHHCCC
>Mature Secondary Structure
MFDFIRKRINKTIKDASDAIPEEEMETNETDTEIEEKNDVSTGEKEITTDTEVSDDNSKN
CHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCC
MEESEEDDKESDDDKEENKGMFSFFRRNNDSDNDDESKSSDEKPSEDIVGDNQVNKGEIV
CCHHHHCCCCCCCCHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEE
ESGDADKSKDNDKEENKGMFSFFRRNNDSDNDDESKSSDEKSSDNINDNNQVDKENVESI
ECCCCCCCCCCCCHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
EMDEKSEEESESVEKSKETLDTEDVLVENPPDNIENNEDKKEDKGRFGFFSRNKNKEASS
CCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCC
NQKDEKEEDKSDDDSGRFSFITKKTIKEEDIEDILEELEFSLIEGDVAFDVAERIVESVK
CCCCHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
EDLIGKKIKRRGDMELFTTNALKKAITEIIDNGYYDLLGDIEKSKEKGEPYKIMFVGING
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEEECC
TGKTTTIAKIATYLEKHGYSSVFGASDTFRAGAIEQLEHHANNLNLKIIKHERNSDPAAV
CCCHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHH
AFDAVEHAKASGKDVVLIDTSGRMQTNANLMDEMKKIKRVSQPDIVIYVGDALMGNDATE
HHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHCCCHHH
QASKFNEVIDIDGIILTKADADAKGGAAISIGHVIHKPILFIGTGQSYDDLMEFEPEWMI
HHHHHHHHEECCCEEEEECCCCCCCCCEEEHHHHHHCCEEEEECCCCHHHHHHCCHHHHH
NQIFNEEAEA
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]