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The map label for this gene is pfdA

Identifier: 84489409

GI number: 84489409

Start: 695632

End: 696048

Strand: Direct

Name: pfdA

Synonym: Msp_0600

Alternate gene names: 84489409

Gene position: 695632-696048 (Clockwise)

Preceding gene: 84489408

Following gene: 84489410

Centisome position: 39.36

GC content: 30.7

Gene sequence:

>417_bases
ATGGAAGATAGACAAAAATTAGAACAAATGGTCACTGAAATTAACCAATTACAACAACAAGGTGAAACAATAACCCAACA
AATTGAACAGTTAAATCAGTCACTTGCTGATATTACAACTGCTCAAGAAGCTGTTAAGGGTATTAAAAATGCTACAGGTA
AACAAACTTTAGTTCCTATAGGAGCTGGATGTTTTATTGAAACAGAACTTAAATCTGAAGATATCATAGTAGGAGTAGGT
TCTGATGTTGCAATAAAAAGATCACGTGAAGAAACTGAAAAAACTCTTCAAACTGATAAAGAAGAAGTACAAAAATTAAT
CGGTTCATTAACTGAACAATTACAAAAAATTAATGAATATATTGCACAAAAAAGACCTGAAGCAGAAAGATTAATGAAAG
AAACAGGAGTACAATAG

Upstream 100 bases:

>100_bases
TTTCTGAAATAACAGCAGATGAAGTAACTGACCCTGTTGTACAAAATTTAATTTAAATGTGCCGTTGTAGACCATTAATT
GAAAATGGAGAGTATTTCTT

Downstream 100 bases:

>100_bases
GTACTCTAAGTTTTAACTTCTTTTTTTTAAATAACCATCAAATATAAAACTATTTTTCATGGATTTTAATAATAAAATTG
ATTATCCACAATATTTCGAT

Product: prefoldin subunit alpha

Products: NA

Alternate protein names: GimC subunit alpha

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MEDRQKLEQMVTEINQLQQQGETITQQIEQLNQSLADITTAQEAVKGIKNATGKQTLVPIGAGCFIETELKSEDIIVGVG
SDVAIKRSREETEKTLQTDKEEVQKLIGSLTEQLQKINEYIAQKRPEAERLMKETGVQ

Sequences:

>Translated_138_residues
MEDRQKLEQMVTEINQLQQQGETITQQIEQLNQSLADITTAQEAVKGIKNATGKQTLVPIGAGCFIETELKSEDIIVGVG
SDVAIKRSREETEKTLQTDKEEVQKLIGSLTEQLQKINEYIAQKRPEAERLMKETGVQ
>Mature_138_residues
MEDRQKLEQMVTEINQLQQQGETITQQIEQLNQSLADITTAQEAVKGIKNATGKQTLVPIGAGCFIETELKSEDIIVGVG
SDVAIKRSREETEKTLQTDKEEVQKLIGSLTEQLQKINEYIAQKRPEAERLMKETGVQ

Specific function: Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding

COG id: COG1730

COG function: function code O; Predicted prefoldin, molecular chaperone implicated in de novo protein folding

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prefoldin subunit alpha family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PFDA_METST (Q2NGQ5)

Other databases:

- EMBL:   CP000102
- RefSeq:   YP_447641.1
- ProteinModelPortal:   Q2NGQ5
- SMR:   Q2NGQ5
- STRING:   Q2NGQ5
- GeneID:   3855886
- GenomeReviews:   CP000102_GR
- KEGG:   mst:Msp_0600
- NMPDR:   fig|339860.6.peg.581
- eggNOG:   arNOG13221
- OMA:   HANIADV
- ProtClustDB:   PRK03947
- BioCyc:   MSTA339860:MSP_0600-MONOMER
- HAMAP:   MF_00308
- InterPro:   IPR011599
- InterPro:   IPR009053
- InterPro:   IPR004127
- TIGRFAMs:   TIGR00293

Pfam domain/function: PF02996 Prefoldin; SSF46579 Prefoldin

EC number: NA

Molecular weight: Translated: 15471; Mature: 15471

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDRQKLEQMVTEINQLQQQGETITQQIEQLNQSLADITTAQEAVKGIKNATGKQTLVPI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC
GAGCFIETELKSEDIIVGVGSDVAIKRSREETEKTLQTDKEEVQKLIGSLTEQLQKINEY
CCCCEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
IAQKRPEAERLMKETGVQ
HHHCCCHHHHHHHHHCCC
>Mature Secondary Structure
MEDRQKLEQMVTEINQLQQQGETITQQIEQLNQSLADITTAQEAVKGIKNATGKQTLVPI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC
GAGCFIETELKSEDIIVGVGSDVAIKRSREETEKTLQTDKEEVQKLIGSLTEQLQKINEY
CCCCEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
IAQKRPEAERLMKETGVQ
HHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA