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The map label for this gene is rps19e

Identifier: 84489403

GI number: 84489403

Start: 692556

End: 692993

Strand: Direct

Name: rps19e

Synonym: Msp_0594

Alternate gene names: 84489403

Gene position: 692556-692993 (Clockwise)

Preceding gene: 84489402

Following gene: 84489404

Centisome position: 39.18

GC content: 34.02

Gene sequence:

>438_bases
ATGACAACAGCATTTGATGTACCTGCTGAAAGTTTAATTAGCGCAGTAAGTAAAGAATTAAAAGAAAATGATAAAATAAA
CACACCAACATGGGCAATGTTTGTTAAAACAGGAGTTCATAAAGAACGCAGACCTGAAAACCCTGATTGGTGGTATGTAA
GAACAGCAGCTCTTTTAAGAAGAGTATATGTAGATGGTCCAGTTGGAATTAGTAGATTACAAACTAAATATGGTGGCAAC
AAAGATAGAGGAACTAGTCCTGAAAAATTCAAAAGAGGTAGTGGATCTATTATCAGACATGCATTACAACAATTAGAAGC
TGCTGGATATGTTCAACAATCTGAAGAAGGAAGAACTGTAACACCTGCAGGACAATCCTACTTAGATAATAAAGCAGCAG
AAATAATTAAAGATATTCCAGAATTATCAAAATACTAA

Upstream 100 bases:

>100_bases
ATGTTCGTGGTAATGTAGCTGTATTATATAAGAGAAAGTAATCTCTAAAAGTATAGGTAAAAACTAAAACATTATAATTT
AATAGGAGGCAAATTAAACC

Downstream 100 bases:

>100_bases
ATTAGTAAGTTGTTAATGATATGGAAATTAAAGGAGTTGTACTAAATGAGTGATCTTGACGAAATTAGACGTAGAAGAAT
GGAACAATTAAAACAACAGC

Product: 30S ribosomal protein S19e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MTTAFDVPAESLISAVSKELKENDKINTPTWAMFVKTGVHKERRPENPDWWYVRTAALLRRVYVDGPVGISRLQTKYGGN
KDRGTSPEKFKRGSGSIIRHALQQLEAAGYVQQSEEGRTVTPAGQSYLDNKAAEIIKDIPELSKY

Sequences:

>Translated_145_residues
MTTAFDVPAESLISAVSKELKENDKINTPTWAMFVKTGVHKERRPENPDWWYVRTAALLRRVYVDGPVGISRLQTKYGGN
KDRGTSPEKFKRGSGSIIRHALQQLEAAGYVQQSEEGRTVTPAGQSYLDNKAAEIIKDIPELSKY
>Mature_144_residues
TTAFDVPAESLISAVSKELKENDKINTPTWAMFVKTGVHKERRPENPDWWYVRTAALLRRVYVDGPVGISRLQTKYGGNK
DRGTSPEKFKRGSGSIIRHALQQLEAAGYVQQSEEGRTVTPAGQSYLDNKAAEIIKDIPELSKY

Specific function: Unknown

COG id: COG2238

COG function: function code J; Ribosomal protein S19E (S16A)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S19e family [H]

Homologues:

Organism=Homo sapiens, GI4506695, Length=135, Percent_Identity=35.5555555555556, Blast_Score=94, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17508697, Length=136, Percent_Identity=36.7647058823529, Blast_Score=97, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6324027, Length=135, Percent_Identity=37.037037037037, Blast_Score=84, Evalue=7e-18,
Organism=Saccharomyces cerevisiae, GI6324451, Length=135, Percent_Identity=37.037037037037, Blast_Score=84, Evalue=7e-18,
Organism=Drosophila melanogaster, GI24649452, Length=135, Percent_Identity=37.7777777777778, Blast_Score=96, Evalue=8e-21,
Organism=Drosophila melanogaster, GI17647891, Length=136, Percent_Identity=36.7647058823529, Blast_Score=91, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24642576, Length=136, Percent_Identity=36.7647058823529, Blast_Score=91, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24642574, Length=136, Percent_Identity=36.7647058823529, Blast_Score=91, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001266
- InterPro:   IPR018277
- InterPro:   IPR011991
- ProDom:   PD003854 [H]

Pfam domain/function: PF01090 Ribosomal_S19e [H]

EC number: NA

Molecular weight: Translated: 16254; Mature: 16122

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS00628 RIBOSOMAL_S19E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTAFDVPAESLISAVSKELKENDKINTPTWAMFVKTGVHKERRPENPDWWYVRTAALLR
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHH
RVYVDGPVGISRLQTKYGGNKDRGTSPEKFKRGSGSIIRHALQQLEAAGYVQQSEEGRTV
HHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEE
TPAGQSYLDNKAAEIIKDIPELSKY
CCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTAFDVPAESLISAVSKELKENDKINTPTWAMFVKTGVHKERRPENPDWWYVRTAALLR
CCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHH
RVYVDGPVGISRLQTKYGGNKDRGTSPEKFKRGSGSIIRHALQQLEAAGYVQQSEEGRTV
HHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEE
TPAGQSYLDNKAAEIIKDIPELSKY
CCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]