Click here to switch to the map view.

The map label for this gene is 84489402

Identifier: 84489402

GI number: 84489402

Start: 692227

End: 692496

Strand: Direct

Name: 84489402

Synonym: Msp_0593

Alternate gene names: NA

Gene position: 692227-692496 (Clockwise)

Preceding gene: 84489401

Following gene: 84489403

Centisome position: 39.17

GC content: 25.56

Gene sequence:

>270_bases
ATGATTAATTTGAGCAAAGTCCAGAGTAGAAAAGAGATAATGAGAAATTCTTTAAATGCTATTGAAATTAATATTGGTAA
AAATGGTATTAATGACAATGTAATTGAAGAAATAAAACGTCAATTAAAAGCTGGAGAAATTGTTAAAGTAAGATTTTCTA
GAAATATTGCTTCTAATAAGGACGAATTCCTAGAAACTATTGTTACTAAAACAAAATCTAAGTTAATTGATGTTCGTGGT
AATGTAGCTGTATTATATAAGAGAAAGTAA

Upstream 100 bases:

>100_bases
TCTAACAACACTATTTCTAGAAAATGTCTAGAATGTGGTGATTTAAAGAAGGTTCCTTACACTAAAAAAAACTAGGGTTA
TATAATAAATAAATGGAGTA

Downstream 100 bases:

>100_bases
TCTCTAAAAGTATAGGTAAAAACTAAAACATTATAATTTAATAGGAGGCAAATTAAACCATGACAACAGCATTTGATGTA
CCTGCTGAAAGTTTAATTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MINLSKVQSRKEIMRNSLNAIEINIGKNGINDNVIEEIKRQLKAGEIVKVRFSRNIASNKDEFLETIVTKTKSKLIDVRG
NVAVLYKRK

Sequences:

>Translated_89_residues
MINLSKVQSRKEIMRNSLNAIEINIGKNGINDNVIEEIKRQLKAGEIVKVRFSRNIASNKDEFLETIVTKTKSKLIDVRG
NVAVLYKRK
>Mature_89_residues
MINLSKVQSRKEIMRNSLNAIEINIGKNGINDNVIEEIKRQLKAGEIVKVRFSRNIASNKDEFLETIVTKTKSKLIDVRG
NVAVLYKRK

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10184; Mature: 10184

Theoretical pI: Translated: 10.94; Mature: 10.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINLSKVQSRKEIMRNSLNAIEINIGKNGINDNVIEEIKRQLKAGEIVKVRFSRNIASNK
CCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCH
DEFLETIVTKTKSKLIDVRGNVAVLYKRK
HHHHHHHHHHHHHHHEECCCCEEEEEECC
>Mature Secondary Structure
MINLSKVQSRKEIMRNSLNAIEINIGKNGINDNVIEEIKRQLKAGEIVKVRFSRNIASNK
CCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCH
DEFLETIVTKTKSKLIDVRGNVAVLYKRK
HHHHHHHHHHHHHHHEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA