Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is 84489363
Identifier: 84489363
GI number: 84489363
Start: 645866
End: 646327
Strand: Direct
Name: 84489363
Synonym: Msp_0553
Alternate gene names: NA
Gene position: 645866-646327 (Clockwise)
Preceding gene: 84489362
Following gene: 84489364
Centisome position: 36.54
GC content: 29.0
Gene sequence:
>462_bases ATGTCAGATTTAGTAGTGTATTATACAAGAACAAATACAACTAAAAATGTTGCTAGTATCATTAAAGATGAGTTAGATGC TGATGTATTGGAAGTTATTGATAAGAAAAATAGACAAGGACCAATAGGTTATCTTCGTGGAGGGCTTGATGCAATAAGAT CTAAAAAAACATCAATAGAATATGAAGATGTTAACTTTGAAAAATATGATAACATATACATTGGTACACCTGTTTGGGCA TCAAAACCTACACCAGCTATTATGGAGTTCATATCTCAAAATAACTTCACTAATAAAAATATCATACTCTTTGCTACAAT GATGAGTAGTGGTGGTGAAGAAACAGTAGATATTATGAAGAAGTTAATTGAAGATAAGGATGGTATTGTAGTTAATTCTT TTGTTATTGCAACTAAAACAGATGATATTACTGATGTAACATTAAAAGCTATTAGAAATTAA
Upstream 100 bases:
>100_bases AAGGAGCTTCAGGTCAAGCTATTCAAAACATGAATATCATGTTTGGATTTGATGAAACTGAAGGACTTAAAGAATTAGGA TTATATCCATAGGTGAATAT
Downstream 100 bases:
>100_bases AAAGAATTTTTCTTTTTTTCTATTTTTCTTGAAAAATAAGGGTGTATGACAATTATTTTTGTTCTATTAATTGTATAAAT TTTTATTAGATATATTATAC
Product: hypothetical protein
Products: NA
Alternate protein names: Flavodoxin/Nitric Oxide Synthase; Flavodoxin FldA; ArsR Family Transcriptional Regulator; Flavodoxin Related Protein; Flavodoxin Family Protein
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MSDLVVYYTRTNTTKNVASIIKDELDADVLEVIDKKNRQGPIGYLRGGLDAIRSKKTSIEYEDVNFEKYDNIYIGTPVWA SKPTPAIMEFISQNNFTNKNIILFATMMSSGGEETVDIMKKLIEDKDGIVVNSFVIATKTDDITDVTLKAIRN
Sequences:
>Translated_153_residues MSDLVVYYTRTNTTKNVASIIKDELDADVLEVIDKKNRQGPIGYLRGGLDAIRSKKTSIEYEDVNFEKYDNIYIGTPVWA SKPTPAIMEFISQNNFTNKNIILFATMMSSGGEETVDIMKKLIEDKDGIVVNSFVIATKTDDITDVTLKAIRN >Mature_152_residues SDLVVYYTRTNTTKNVASIIKDELDADVLEVIDKKNRQGPIGYLRGGLDAIRSKKTSIEYEDVNFEKYDNIYIGTPVWAS KPTPAIMEFISQNNFTNKNIILFATMMSSGGEETVDIMKKLIEDKDGIVVNSFVIATKTDDITDVTLKAIRN
Specific function: Unknown
COG id: COG0716
COG function: function code C; Flavodoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17180; Mature: 17049
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLVVYYTRTNTTKNVASIIKDELDADVLEVIDKKNRQGPIGYLRGGLDAIRSKKTSIE CCCEEEEEEECCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCE YEDVNFEKYDNIYIGTPVWASKPTPAIMEFISQNNFTNKNIILFATMMSSGGEETVDIMK ECCCCCCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHH KLIEDKDGIVVNSFVIATKTDDITDVTLKAIRN HHHCCCCCEEEEEEEEEECCCCCHHHHHHHHCC >Mature Secondary Structure SDLVVYYTRTNTTKNVASIIKDELDADVLEVIDKKNRQGPIGYLRGGLDAIRSKKTSIE CCEEEEEEECCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCE YEDVNFEKYDNIYIGTPVWASKPTPAIMEFISQNNFTNKNIILFATMMSSGGEETVDIMK ECCCCCCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHH KLIEDKDGIVVNSFVIATKTDDITDVTLKAIRN HHHCCCCCEEEEEEEEEECCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA