Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is 84489357
Identifier: 84489357
GI number: 84489357
Start: 640839
End: 641258
Strand: Direct
Name: 84489357
Synonym: Msp_0547
Alternate gene names: NA
Gene position: 640839-641258 (Clockwise)
Preceding gene: 84489356
Following gene: 84489358
Centisome position: 36.26
GC content: 33.1
Gene sequence:
>420_bases ATGAATCCAAGTACTAATTCAAAGTTATTTCTTGTATTGGTAGTGGGTGTTGTGGCAATGTTATGTGGATCTGTAGGGGC ATCATTTATTCGTTTTGATGCACCAAACTTATCTATTGGAGAGTTATTTCAAGGTAATGAGGACAATCCTCTAAATGACT TAAATAATTCAACACTAAATCAGTCAAATCAAAGTCAATCATCTAATTCATATTCAAAGTATACATCATCACCATCACAA CAAAGTACTTCTAAACAAGCATCTGTAAAACAACAGAATAAACCGAAAACAACATCATCCAATAATAATCAGAATACTAA ACCATCTAAACCGAGTGGTGGTTCTCAAGGTAGTAACACAAACCCTAATGGTCAAGATAACCCTTCTGTACATGAGAATG ATAATGACTTAATAGCATAA
Upstream 100 bases:
>100_bases TTAATAGGATGGAATTTAAATATCATATGGCTAGGAATAGTAGCTATGATAGTTTCATTAATTATGGTGGCAATTAAAGA CTAATGGGGAGGTAATAATT
Downstream 100 bases:
>100_bases TATTTTGGAGAAGTAATATGAGGGAAAATAATTTAATAGTGTTAATAGTAGCAGTAATACTTGTAGGTGCTATTGTAGTG GGAGTATTTACTGGATCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MNPSTNSKLFLVLVVGVVAMLCGSVGASFIRFDAPNLSIGELFQGNEDNPLNDLNNSTLNQSNQSQSSNSYSKYTSSPSQ QSTSKQASVKQQNKPKTTSSNNNQNTKPSKPSGGSQGSNTNPNGQDNPSVHENDNDLIA
Sequences:
>Translated_139_residues MNPSTNSKLFLVLVVGVVAMLCGSVGASFIRFDAPNLSIGELFQGNEDNPLNDLNNSTLNQSNQSQSSNSYSKYTSSPSQ QSTSKQASVKQQNKPKTTSSNNNQNTKPSKPSGGSQGSNTNPNGQDNPSVHENDNDLIA >Mature_139_residues MNPSTNSKLFLVLVVGVVAMLCGSVGASFIRFDAPNLSIGELFQGNEDNPLNDLNNSTLNQSNQSQSSNSYSKYTSSPSQ QSTSKQASVKQQNKPKTTSSNNNQNTKPSKPSGGSQGSNTNPNGQDNPSVHENDNDLIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14736; Mature: 14736
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPSTNSKLFLVLVVGVVAMLCGSVGASFIRFDAPNLSIGELFQGNEDNPLNDLNNSTLN CCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCC QSNQSQSSNSYSKYTSSPSQQSTSKQASVKQQNKPKTTSSNNNQNTKPSKPSGGSQGSNT CCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NPNGQDNPSVHENDNDLIA CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNPSTNSKLFLVLVVGVVAMLCGSVGASFIRFDAPNLSIGELFQGNEDNPLNDLNNSTLN CCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCC QSNQSQSSNSYSKYTSSPSQQSTSKQASVKQQNKPKTTSSNNNQNTKPSKPSGGSQGSNT CCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NPNGQDNPSVHENDNDLIA CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA