Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
---|---|
Accession | NC_007681 |
Length | 1,767,403 |
Click here to switch to the map view.
The map label for this gene is 84489358
Identifier: 84489358
GI number: 84489358
Start: 641276
End: 641659
Strand: Direct
Name: 84489358
Synonym: Msp_0548
Alternate gene names: NA
Gene position: 641276-641659 (Clockwise)
Preceding gene: 84489357
Following gene: 84489359
Centisome position: 36.28
GC content: 31.25
Gene sequence:
>384_bases ATGAGGGAAAATAATTTAATAGTGTTAATAGTAGCAGTAATACTTGTAGGTGCTATTGTAGTGGGAGTATTTACTGGATC ATCTCCATCAAATGATAATAACACAACCATAACTGATACAGTTAATATGACAAATAACACTACAAACATGACAAATGAAA CAAATGCAACATCAACTACAGATGATACTATTCAATCATCAAATTCAAAGTCACAAAGTACTTCTAAACAAGCATCTGTA AAACAACAGAATAAACCGAAAACAACATCATCCAATAATAATCAGAATACTAAACCATCTAAACCTAGTGGTGGTTCCAC AGACAGTAATACTAATCAACATAACCCTTCTGTACATGAGAAAGATAATGACTTAACAGCATAA
Upstream 100 bases:
>100_bases GTGGTTCTCAAGGTAGTAACACAAACCCTAATGGTCAAGATAACCCTTCTGTACATGAGAATGATAATGACTTAATAGCA TAATATTTTGGAGAAGTAAT
Downstream 100 bases:
>100_bases ATATAATCTAAAGAATAAGAAAAATCGGAAAAATTAATTTATAACCACCCAATTTTAAACTTATTTTTTTATTAAATAAT TTTTTTTAAGGGAGAAGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MRENNLIVLIVAVILVGAIVVGVFTGSSPSNDNNTTITDTVNMTNNTTNMTNETNATSTTDDTIQSSNSKSQSTSKQASV KQQNKPKTTSSNNNQNTKPSKPSGGSTDSNTNQHNPSVHEKDNDLTA
Sequences:
>Translated_127_residues MRENNLIVLIVAVILVGAIVVGVFTGSSPSNDNNTTITDTVNMTNNTTNMTNETNATSTTDDTIQSSNSKSQSTSKQASV KQQNKPKTTSSNNNQNTKPSKPSGGSTDSNTNQHNPSVHEKDNDLTA >Mature_127_residues MRENNLIVLIVAVILVGAIVVGVFTGSSPSNDNNTTITDTVNMTNNTTNMTNETNATSTTDDTIQSSNSKSQSTSKQASV KQQNKPKTTSSNNNQNTKPSKPSGGSTDSNTNQHNPSVHEKDNDLTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13441; Mature: 13441
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRENNLIVLIVAVILVGAIVVGVFTGSSPSNDNNTTITDTVNMTNNTTNMTNETNATSTT CCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC DDTIQSSNSKSQSTSKQASVKQQNKPKTTSSNNNQNTKPSKPSGGSTDSNTNQHNPSVHE CHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KDNDLTA CCCCCCC >Mature Secondary Structure MRENNLIVLIVAVILVGAIVVGVFTGSSPSNDNNTTITDTVNMTNNTTNMTNETNATSTT CCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC DDTIQSSNSKSQSTSKQASVKQQNKPKTTSSNNNQNTKPSKPSGGSTDSNTNQHNPSVHE CHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KDNDLTA CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA