Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is 84489356
Identifier: 84489356
GI number: 84489356
Start: 639608
End: 640822
Strand: Direct
Name: 84489356
Synonym: Msp_0546
Alternate gene names: NA
Gene position: 639608-640822 (Clockwise)
Preceding gene: 84489355
Following gene: 84489357
Centisome position: 36.19
GC content: 30.21
Gene sequence:
>1215_bases ATGGCTTTAGATAGGATTCTAAAAAGCCTATTTTCACAACTTCTACATAAAAAAGTTGTTAGTATTGGAACAAAGTACTA TGCAACTAATGACTTAGAAACAGAGTATGTTTCTTTAATAAACCTCACAAAAACAATGCTTGTAGAAATTAAACCTGCAC AAATAAATGCTAAATCAATATTTCAAAATCTAGAAAGAGAAATAGACCAAAGAGATCTACCACTTAATAGGAAATTTATT GAAATTAAACCTGCTGAAAATGAAGTAAATGAATATGCACTTCTAAGTAATATTATCATGGGAAATGATAGATATCTTTA TATTGAATTGTTTAGACCATCTCCTCTTATAGAAACATTTGCAAAAATGGTGGAAGTAGTTGATGGAAAGATCATTGAAA GAAGTAAAACAGAAATGGTTGCTCTTATGCCATCAAAAAAGGAAGGAATAAGATTAGCTATTAAAATGATATCTCTTGGA ATGAAACAAGGGGTAAATGTACGTGGTTCAATAGGAATGACTGGAGCAGCATCTATCGAAAGGGCAATAGATATGAATGC TGCAATAGGAGAAGTTTCTGGAGTTGGATTTACAAAACTTGGTGGAGAATATGGAGTAATATTTGAAACTGTTCCAACTA CTAAAAAAGTTGAATTGAAACCAGTACCAGCAGATAATTTCATGTACATTGATGCAAAAGATTCTACAGGATTTATTTCA AGATATGGAAAAGATAAACTTATAGAAATAATGAATGATATCAACTCATATATTGAAAATGAAAGTGATGGAAAAATAGA AGGATACCGTGTTGGTGGGGATGATTTAATAATTAATTATCCTGATAAATCAACAGCACTGAAAATAGGACTTGACTGTG CATGGTATGCTATGAATAATGGATTAAATCTAAGGGTAGGATTAGGAAATAGTAGACGTGAAGCTGCAGAAAATGCACAT ATCACTGATTCAATAAAAATAAGAGAAAATACTCCAGTTATAGTGTTTGACTTAGCAAATGGTAAATATGCATACTATAT TCCAACAGAATTCACAAGATCTGCAATAACTTTCCTATCAAATCAAACTCTAACCTTAATTGGTATATTTATATTCATAT TTATAGTAACTTTAATAGGATGGAATTTAAATATCATATGGCTAGGAATAGTAGCTATGATAGTTTCATTAATTATGGTG GCAATTAAAGACTAA
Upstream 100 bases:
>100_bases TGGAACATGGAAATTCCCAATTGTATCAGTAAAACCAAGTATGTTAATGGAAAAACCTGGACAATTTGAAATTTCTATAG AAAGAGGGGGTAGAAATTAG
Downstream 100 bases:
>100_bases TGGGGAGGTAATAATTATGAATCCAAGTACTAATTCAAAGTTATTTCTTGTATTGGTAGTGGGTGTTGTGGCAATGTTAT GTGGATCTGTAGGGGCATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MALDRILKSLFSQLLHKKVVSIGTKYYATNDLETEYVSLINLTKTMLVEIKPAQINAKSIFQNLEREIDQRDLPLNRKFI EIKPAENEVNEYALLSNIIMGNDRYLYIELFRPSPLIETFAKMVEVVDGKIIERSKTEMVALMPSKKEGIRLAIKMISLG MKQGVNVRGSIGMTGAASIERAIDMNAAIGEVSGVGFTKLGGEYGVIFETVPTTKKVELKPVPADNFMYIDAKDSTGFIS RYGKDKLIEIMNDINSYIENESDGKIEGYRVGGDDLIINYPDKSTALKIGLDCAWYAMNNGLNLRVGLGNSRREAAENAH ITDSIKIRENTPVIVFDLANGKYAYYIPTEFTRSAITFLSNQTLTLIGIFIFIFIVTLIGWNLNIIWLGIVAMIVSLIMV AIKD
Sequences:
>Translated_404_residues MALDRILKSLFSQLLHKKVVSIGTKYYATNDLETEYVSLINLTKTMLVEIKPAQINAKSIFQNLEREIDQRDLPLNRKFI EIKPAENEVNEYALLSNIIMGNDRYLYIELFRPSPLIETFAKMVEVVDGKIIERSKTEMVALMPSKKEGIRLAIKMISLG MKQGVNVRGSIGMTGAASIERAIDMNAAIGEVSGVGFTKLGGEYGVIFETVPTTKKVELKPVPADNFMYIDAKDSTGFIS RYGKDKLIEIMNDINSYIENESDGKIEGYRVGGDDLIINYPDKSTALKIGLDCAWYAMNNGLNLRVGLGNSRREAAENAH ITDSIKIRENTPVIVFDLANGKYAYYIPTEFTRSAITFLSNQTLTLIGIFIFIFIVTLIGWNLNIIWLGIVAMIVSLIMV AIKD >Mature_403_residues ALDRILKSLFSQLLHKKVVSIGTKYYATNDLETEYVSLINLTKTMLVEIKPAQINAKSIFQNLEREIDQRDLPLNRKFIE IKPAENEVNEYALLSNIIMGNDRYLYIELFRPSPLIETFAKMVEVVDGKIIERSKTEMVALMPSKKEGIRLAIKMISLGM KQGVNVRGSIGMTGAASIERAIDMNAAIGEVSGVGFTKLGGEYGVIFETVPTTKKVELKPVPADNFMYIDAKDSTGFISR YGKDKLIEIMNDINSYIENESDGKIEGYRVGGDDLIINYPDKSTALKIGLDCAWYAMNNGLNLRVGLGNSRREAAENAHI TDSIKIRENTPVIVFDLANGKYAYYIPTEFTRSAITFLSNQTLTLIGIFIFIFIVTLIGWNLNIIWLGIVAMIVSLIMVA IKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45168; Mature: 45037
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALDRILKSLFSQLLHKKVVSIGTKYYATNDLETEYVSLINLTKTMLVEIKPAQINAKSI CCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCEEEEEEEECCCCCHHHH FQNLEREIDQRDLPLNRKFIEIKPAENEVNEYALLSNIIMGNDRYLYIELFRPSPLIETF HHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHEECCCCEEEEEEECCCHHHHHH AKMVEVVDGKIIERSKTEMVALMPSKKEGIRLAIKMISLGMKQGVNVRGSIGMTGAASIE HHHHHHHCCCCEECCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH RAIDMNAAIGEVSGVGFTKLGGEYGVIFETVPTTKKVELKPVPADNFMYIDAKDSTGFIS HHHCCCCCCCCCCCCCEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCHHH RYGKDKLIEIMNDINSYIENESDGKIEGYRVGGDDLIINYPDKSTALKIGLDCAWYAMNN HCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCCCCEEEEECEEEEEEECC GLNLRVGLGNSRREAAENAHITDSIKIRENTPVIVFDLANGKYAYYIPTEFTRSAITFLS CCEEEEECCCCHHHHHCCCCCCEEEEEECCCCEEEEECCCCEEEEECCCHHHHHHHHHHC NQTLTLIGIFIFIFIVTLIGWNLNIIWLGIVAMIVSLIMVAIKD CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ALDRILKSLFSQLLHKKVVSIGTKYYATNDLETEYVSLINLTKTMLVEIKPAQINAKSI CHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCEEEEEEEECCCCCHHHH FQNLEREIDQRDLPLNRKFIEIKPAENEVNEYALLSNIIMGNDRYLYIELFRPSPLIETF HHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHEECCCCEEEEEEECCCHHHHHH AKMVEVVDGKIIERSKTEMVALMPSKKEGIRLAIKMISLGMKQGVNVRGSIGMTGAASIE HHHHHHHCCCCEECCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH RAIDMNAAIGEVSGVGFTKLGGEYGVIFETVPTTKKVELKPVPADNFMYIDAKDSTGFIS HHHCCCCCCCCCCCCCEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCHHH RYGKDKLIEIMNDINSYIENESDGKIEGYRVGGDDLIINYPDKSTALKIGLDCAWYAMNN HCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCCCCEEEEECEEEEEEECC GLNLRVGLGNSRREAAENAHITDSIKIRENTPVIVFDLANGKYAYYIPTEFTRSAITFLS CCEEEEECCCCHHHHHCCCCCCEEEEEECCCCEEEEECCCCEEEEECCCHHHHHHHHHHC NQTLTLIGIFIFIFIVTLIGWNLNIIWLGIVAMIVSLIMVAIKD CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA