Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
---|---|
Accession | NC_007681 |
Length | 1,767,403 |
Click here to switch to the map view.
The map label for this gene is 84489355
Identifier: 84489355
GI number: 84489355
Start: 638567
End: 639607
Strand: Direct
Name: 84489355
Synonym: Msp_0545
Alternate gene names: NA
Gene position: 638567-639607 (Clockwise)
Preceding gene: 84489354
Following gene: 84489356
Centisome position: 36.13
GC content: 30.55
Gene sequence:
>1041_bases TTGAAAATAATTGTTGATGGGTCTAATGTAGCATATTATGGACAGCAACCCAACGAAGAAACAGGAAAGGTAACTCCAAG TTTAAAAACTCTTAAAGTTGCTATAAATACTCTTAAAAAACTAGGACATGAACCAATTGTTCTATCTGATGCACCATTAC GACATGAAATTGATGATAAAGATGGCTTTAATGAAATGATCCAAAATGAAGAGGTGTTTCCAGTACCTGCAGGTACAATA GCAGATCATTATATATTAAACCTAGCTTATGAGAAAGATGCTAAAATATTATCAAATGACTTCTTTAGAGATTATCAGGA TGAATTTCAAGATATTAACAGTAGACGTCTACCATACAGAGTTAAAAATGGTAGATTTCAAATAGGTAAACCAGCACCTC CTAAGAAAGTAAAAAACATACTACAAAAAATCTGCTCAAATTCATTAAATGAATTTGAAAGAAGGGGTTTTGATGTATAT AAATCTAAGAAAAATAGAAAATTTTCAGGATTATCTGTAGCTCAAGAGGCAATAAACAGGGTAAGTAAAGAGGATGAAAA TGCAATAGATTCAAAACTAGAAAATATCTTCCTTAAAGTACCAATATTAAATAAGATGGTAAGCTTAGTAGATGAAGATA TAGATGAATCAGATTTTCTCATATTTGTACTTGTAAATCCTAAAGATTACAAGGAAGCAGTACGTAATGCAGGAACAATA GCAGTTACTGTACGTAACAAATTAAACTTAGATCATTCCCCACTAGTAGCAGTACGTAATGATCTATTTACAAGACCGGG AACATTTGAATTGAATATAATATATTCTGATGAAATTCTTGAAGAATCACCATATAATGTGGATATAATAATAAATGATA CAGATTACTCATTTATTAAACATAATTCAAGAAATATTGCAAGTACACTTGCAGCAAGACTTGGAACATGGAAATTCCCA ATTGTATCAGTAAAACCAAGTATGTTAATGGAAAAACCTGGACAATTTGAAATTTCTATAGAAAGAGGGGGTAGAAATTA G
Upstream 100 bases:
>100_bases CCATATAATTTAAAAAAGTAAATATATCAAAAATAATATAAATATATTAATAAATAAATTAGAAAATTTTAAAATAAATA GAATAAAAAAAGGTGATCTT
Downstream 100 bases:
>100_bases ATGGCTTTAGATAGGATTCTAAAAAGCCTATTTTCACAACTTCTACATAAAAAAGTTGTTAGTATTGGAACAAAGTACTA TGCAACTAATGACTTAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MKIIVDGSNVAYYGQQPNEETGKVTPSLKTLKVAINTLKKLGHEPIVLSDAPLRHEIDDKDGFNEMIQNEEVFPVPAGTI ADHYILNLAYEKDAKILSNDFFRDYQDEFQDINSRRLPYRVKNGRFQIGKPAPPKKVKNILQKICSNSLNEFERRGFDVY KSKKNRKFSGLSVAQEAINRVSKEDENAIDSKLENIFLKVPILNKMVSLVDEDIDESDFLIFVLVNPKDYKEAVRNAGTI AVTVRNKLNLDHSPLVAVRNDLFTRPGTFELNIIYSDEILEESPYNVDIIINDTDYSFIKHNSRNIASTLAARLGTWKFP IVSVKPSMLMEKPGQFEISIERGGRN
Sequences:
>Translated_346_residues MKIIVDGSNVAYYGQQPNEETGKVTPSLKTLKVAINTLKKLGHEPIVLSDAPLRHEIDDKDGFNEMIQNEEVFPVPAGTI ADHYILNLAYEKDAKILSNDFFRDYQDEFQDINSRRLPYRVKNGRFQIGKPAPPKKVKNILQKICSNSLNEFERRGFDVY KSKKNRKFSGLSVAQEAINRVSKEDENAIDSKLENIFLKVPILNKMVSLVDEDIDESDFLIFVLVNPKDYKEAVRNAGTI AVTVRNKLNLDHSPLVAVRNDLFTRPGTFELNIIYSDEILEESPYNVDIIINDTDYSFIKHNSRNIASTLAARLGTWKFP IVSVKPSMLMEKPGQFEISIERGGRN >Mature_346_residues MKIIVDGSNVAYYGQQPNEETGKVTPSLKTLKVAINTLKKLGHEPIVLSDAPLRHEIDDKDGFNEMIQNEEVFPVPAGTI ADHYILNLAYEKDAKILSNDFFRDYQDEFQDINSRRLPYRVKNGRFQIGKPAPPKKVKNILQKICSNSLNEFERRGFDVY KSKKNRKFSGLSVAQEAINRVSKEDENAIDSKLENIFLKVPILNKMVSLVDEDIDESDFLIFVLVNPKDYKEAVRNAGTI AVTVRNKLNLDHSPLVAVRNDLFTRPGTFELNIIYSDEILEESPYNVDIIINDTDYSFIKHNSRNIASTLAARLGTWKFP IVSVKPSMLMEKPGQFEISIERGGRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39367; Mature: 39367
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIIVDGSNVAYYGQQPNEETGKVTPSLKTLKVAINTLKKLGHEPIVLSDAPLRHEIDDK CEEEEECCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCC DGFNEMIQNEEVFPVPAGTIADHYILNLAYEKDAKILSNDFFRDYQDEFQDINSRRLPYR CCHHHHHCCCCEECCCCCHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEE VKNGRFQIGKPAPPKKVKNILQKICSNSLNEFERRGFDVYKSKKNRKFSGLSVAQEAINR ECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHH VSKEDENAIDSKLENIFLKVPILNKMVSLVDEDIDESDFLIFVLVNPKDYKEAVRNAGTI HCCCCHHHHHHHHHHEEEECHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHCCCEE AVTVRNKLNLDHSPLVAVRNDLFTRPGTFELNIIYSDEILEESPYNVDIIINDTDYSFIK EEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEECHHHHCCCCCEEEEEEECCCCHHHH HNSRNIASTLAARLGTWKFPIVSVKPSMLMEKPGQFEISIERGGRN CCCCHHHHHHHHHHCCCCCEEEEECHHHHHCCCCCEEEEEECCCCC >Mature Secondary Structure MKIIVDGSNVAYYGQQPNEETGKVTPSLKTLKVAINTLKKLGHEPIVLSDAPLRHEIDDK CEEEEECCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCC DGFNEMIQNEEVFPVPAGTIADHYILNLAYEKDAKILSNDFFRDYQDEFQDINSRRLPYR CCHHHHHCCCCEECCCCCHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEE VKNGRFQIGKPAPPKKVKNILQKICSNSLNEFERRGFDVYKSKKNRKFSGLSVAQEAINR ECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHH VSKEDENAIDSKLENIFLKVPILNKMVSLVDEDIDESDFLIFVLVNPKDYKEAVRNAGTI HCCCCHHHHHHHHHHEEEECHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHCCCEE AVTVRNKLNLDHSPLVAVRNDLFTRPGTFELNIIYSDEILEESPYNVDIIINDTDYSFIK EEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEECHHHHCCCCCEEEEEEECCCCHHHH HNSRNIASTLAARLGTWKFPIVSVKPSMLMEKPGQFEISIERGGRN CCCCHHHHHHHHHHCCCCCEEEEECHHHHHCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA