Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
---|---|
Accession | NC_007681 |
Length | 1,767,403 |
Click here to switch to the map view.
The map label for this gene is fieF [H]
Identifier: 84489329
GI number: 84489329
Start: 614403
End: 615293
Strand: Direct
Name: fieF [H]
Synonym: Msp_0519
Alternate gene names: 84489329
Gene position: 614403-615293 (Clockwise)
Preceding gene: 84489326
Following gene: 84489330
Centisome position: 34.76
GC content: 26.94
Gene sequence:
>891_bases ATGTCTAATGAATATTATAGAAAAGTTAGAGAAGTTTTAGTACTTATATTAATAATTAACATAGCTATAGGTTTAGTTAA AATTATATATGGATATAAAGCAGGAGTTTTAAGTATTACAGCAGATGGTTATGATTCACTACTTGATGCTGTTTCAAACA TCGTTGGAATAGTAATACTACTTGTTTCAGCAAAACCCTCAGATAAAGAACATAGGTATGGACACTATAAATTAGAAACT TTTGCATCAATATTAATATCATTTACATTGTTTATAGTGGCATATGAAATAATTTCATCTGCATTTGAACGTTTCTTTGC AATTACAACACCATCAATTTCTATAACAACATATCTTGTAATGATAATTACATTGATTATAACACTAATAGCTGCATATT ATGAAAAAAGCATGGCTAAAAAATTACATAGCAACATACTTCTTTCAGATAGTGAACATATAAAAAGTGATGCTCTTGCA ACATTTATCATAATAATAAGTCTTGTATTTGTTCAATTAGGTTATACTATACTTGATCCAATATTATCTATTGGAATTTC ATTACTAATTATAAAAACTGGACTAACAATCCTATACTCCAATATCAACATATTACTTGATAAAAATATCTTATCTACCT ATGAAATAGAAGATGTAGTAAAAGATATAAATGAAATAAAGGAGGTACATAATGTACGAACAAGAGGAACAGCTTCAACA ATTTTTTTAGATATGCATCTAGTATTATCTAAGGATTTATCACTAGCTGATGCACATAGGTTATCACATATTTGTGAAGA AAAGATATGTGAGGAATATCCTGAAATTAAGGATGTATTAATTCATATTGAACCTGAAGAGGGTATGGATGATAAGATTG AATATGAATAA
Upstream 100 bases:
>100_bases AGAATACATAATTATTTAGTTATACCTCATAATAAAATACTTTATTATTAATTAAATATAAATTTTATAATTAAATTGAG GTTAAATAATAGATGATTAT
Downstream 100 bases:
>100_bases TAATACATCCACCATTTTTTTTGAATCTATTTTTAATGATTTTTTTGAATTTAATAATATTTCTTTTAATATAATTTTTT AATAAATTATTTCATTTAAG
Product: Co/Zn/Cd cation transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MSNEYYRKVREVLVLILIINIAIGLVKIIYGYKAGVLSITADGYDSLLDAVSNIVGIVILLVSAKPSDKEHRYGHYKLET FASILISFTLFIVAYEIISSAFERFFAITTPSISITTYLVMIITLIITLIAAYYEKSMAKKLHSNILLSDSEHIKSDALA TFIIIISLVFVQLGYTILDPILSIGISLLIIKTGLTILYSNINILLDKNILSTYEIEDVVKDINEIKEVHNVRTRGTAST IFLDMHLVLSKDLSLADAHRLSHICEEKICEEYPEIKDVLIHIEPEEGMDDKIEYE
Sequences:
>Translated_296_residues MSNEYYRKVREVLVLILIINIAIGLVKIIYGYKAGVLSITADGYDSLLDAVSNIVGIVILLVSAKPSDKEHRYGHYKLET FASILISFTLFIVAYEIISSAFERFFAITTPSISITTYLVMIITLIITLIAAYYEKSMAKKLHSNILLSDSEHIKSDALA TFIIIISLVFVQLGYTILDPILSIGISLLIIKTGLTILYSNINILLDKNILSTYEIEDVVKDINEIKEVHNVRTRGTAST IFLDMHLVLSKDLSLADAHRLSHICEEKICEEYPEIKDVLIHIEPEEGMDDKIEYE >Mature_295_residues SNEYYRKVREVLVLILIINIAIGLVKIIYGYKAGVLSITADGYDSLLDAVSNIVGIVILLVSAKPSDKEHRYGHYKLETF ASILISFTLFIVAYEIISSAFERFFAITTPSISITTYLVMIITLIITLIAAYYEKSMAKKLHSNILLSDSEHIKSDALAT FIIIISLVFVQLGYTILDPILSIGISLLIIKTGLTILYSNINILLDKNILSTYEIEDVVKDINEIKEVHNVRTRGTASTI FLDMHLVLSKDLSLADAHRLSHICEEKICEEYPEIKDVLIHIEPEEGMDDKIEYE
Specific function: Cation-efflux transporter that may have a role in detoxification [H]
COG id: COG0053
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. FieF subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790349, Length=290, Percent_Identity=25.8620689655172, Blast_Score=116, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 33321; Mature: 33189
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNEYYRKVREVLVLILIINIAIGLVKIIYGYKAGVLSITADGYDSLLDAVSNIVGIVIL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHH LVSAKPSDKEHRYGHYKLETFASILISFTLFIVAYEIISSAFERFFAITTPSISITTYLV HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH MIITLIITLIAAYYEKSMAKKLHSNILLSDSEHIKSDALATFIIIISLVFVQLGYTILDP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILSIGISLLIIKTGLTILYSNINILLDKNILSTYEIEDVVKDINEIKEVHNVRTRGTAST HHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH IFLDMHLVLSKDLSLADAHRLSHICEEKICEEYPEIKDVLIHIEPEEGMDDKIEYE HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCCCCCCCCCC >Mature Secondary Structure SNEYYRKVREVLVLILIINIAIGLVKIIYGYKAGVLSITADGYDSLLDAVSNIVGIVIL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHH LVSAKPSDKEHRYGHYKLETFASILISFTLFIVAYEIISSAFERFFAITTPSISITTYLV HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH MIITLIITLIAAYYEKSMAKKLHSNILLSDSEHIKSDALATFIIIISLVFVQLGYTILDP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILSIGISLLIIKTGLTILYSNINILLDKNILSTYEIEDVVKDINEIKEVHNVRTRGTAST HHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH IFLDMHLVLSKDLSLADAHRLSHICEEKICEEYPEIKDVLIHIEPEEGMDDKIEYE HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA