Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is 84489325
Identifier: 84489325
GI number: 84489325
Start: 609500
End: 610645
Strand: Direct
Name: 84489325
Synonym: Msp_0515
Alternate gene names: NA
Gene position: 609500-610645 (Clockwise)
Preceding gene: 84489324
Following gene: 84489326
Centisome position: 34.49
GC content: 26.79
Gene sequence:
>1146_bases ATGAAAATACTAATTACAACATGTGGGGTAGGTATTGGTCATTCATCAAGGGATGTTGCACTAGCAAAACTACTTGAGAA AAAAGGTCATAAAATCTACTTTGCAAGCTATGGGACAGGACTACATTACCTGCAAAAAAACAACTACAAACCATATAATC TACCACCCATGAACTTCCACCATGAAGATGGAGTACTTGATATAGAAAAATCAGTGAAAAAATCTAAAGATATACCATTT ACCTTCATAAAAAGTATGTATAGAGAATCAAGAATAATAAAAAAAATAAAACCAGATTTAATAATAACTGATTCACTTTA CTCTCCTCCAATAACAGCTAAATTTCTAAATGTTCCATGCTATATAATAACAAACGACCTAACATTTGGATTTTCACAAA ATACAAATATGACTTCAATAAAATACTTTGAAAAAAGTATAAGAAAATTCATAATAGAAATATCCAAGTCAACAAATAAA ATATTAATACCTGATATACCTGAATCCATAACAATACCCAAGGAACTTGAAGATAAAACAGAATTTATAGGACCTCTACT ACATAAAAACCCACAGGAAATAGATACTAAGGAAAATCTAAGAAGAAAATATGGCCTAGATAATAATGAAAAAATTCTTC TAGTAACAATTGGTGGAAGTGATTTTGGAAAAGAATTAATAACAAACATATGTGCAGTATCTGAAGAAATAGAAGTAGAT AAAATTTTCATATTCACAGGTCTTGAATTAAATCCAGATATCTTTAAATTACCATCTTCTAATAAAAAGGTAATAATAAA ACAATTCACATACAATCTAATTGAATGGATGAAACTCTCAGATTTAACAATAACACTAGCAGGTCATACAACATCAATGG AATTAATATCAATAAAAAAACCAAACATAATGATACCAATAAAAAATCATATAGAACAAGAGAGAAACCTTAAGAAAATG AGACAATACAACATAACAAAAACAATAGAAACACAACAAAAACAACAATTACTAGAACTTATTAACAACACAATAAATAA TCTAGATAAAATAGAAATAAATCCAAAATTATATGATACATTTCTAAAATACAATGGAAGAGAAAATGCCCTGAAAGTAA TAGAAAATCTAAATAATATTAAATAA
Upstream 100 bases:
>100_bases ATATAAAAGTATTACTTTTTTTATAATATAGTAATACTTAAAATAGTATAAAATAAAACAACTAATATATAATATAAGTA AAAAATGGGTGTTATAACTT
Downstream 100 bases:
>100_bases ACATATATAATATTAACATTACATGAGGATTGATAAAATGAAGATAGAATACTTTGGACATTCAGCATTTAAAATAGTAT CAGAAGAAGGATTAATTATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MKILITTCGVGIGHSSRDVALAKLLEKKGHKIYFASYGTGLHYLQKNNYKPYNLPPMNFHHEDGVLDIEKSVKKSKDIPF TFIKSMYRESRIIKKIKPDLIITDSLYSPPITAKFLNVPCYIITNDLTFGFSQNTNMTSIKYFEKSIRKFIIEISKSTNK ILIPDIPESITIPKELEDKTEFIGPLLHKNPQEIDTKENLRRKYGLDNNEKILLVTIGGSDFGKELITNICAVSEEIEVD KIFIFTGLELNPDIFKLPSSNKKVIIKQFTYNLIEWMKLSDLTITLAGHTTSMELISIKKPNIMIPIKNHIEQERNLKKM RQYNITKTIETQQKQQLLELINNTINNLDKIEINPKLYDTFLKYNGRENALKVIENLNNIK
Sequences:
>Translated_381_residues MKILITTCGVGIGHSSRDVALAKLLEKKGHKIYFASYGTGLHYLQKNNYKPYNLPPMNFHHEDGVLDIEKSVKKSKDIPF TFIKSMYRESRIIKKIKPDLIITDSLYSPPITAKFLNVPCYIITNDLTFGFSQNTNMTSIKYFEKSIRKFIIEISKSTNK ILIPDIPESITIPKELEDKTEFIGPLLHKNPQEIDTKENLRRKYGLDNNEKILLVTIGGSDFGKELITNICAVSEEIEVD KIFIFTGLELNPDIFKLPSSNKKVIIKQFTYNLIEWMKLSDLTITLAGHTTSMELISIKKPNIMIPIKNHIEQERNLKKM RQYNITKTIETQQKQQLLELINNTINNLDKIEINPKLYDTFLKYNGRENALKVIENLNNIK >Mature_381_residues MKILITTCGVGIGHSSRDVALAKLLEKKGHKIYFASYGTGLHYLQKNNYKPYNLPPMNFHHEDGVLDIEKSVKKSKDIPF TFIKSMYRESRIIKKIKPDLIITDSLYSPPITAKFLNVPCYIITNDLTFGFSQNTNMTSIKYFEKSIRKFIIEISKSTNK ILIPDIPESITIPKELEDKTEFIGPLLHKNPQEIDTKENLRRKYGLDNNEKILLVTIGGSDFGKELITNICAVSEEIEVD KIFIFTGLELNPDIFKLPSSNKKVIIKQFTYNLIEWMKLSDLTITLAGHTTSMELISIKKPNIMIPIKNHIEQERNLKKM RQYNITKTIETQQKQQLLELINNTINNLDKIEINPKLYDTFLKYNGRENALKVIENLNNIK
Specific function: Unknown
COG id: COG1819
COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 28 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004276 - InterPro: IPR007235 [H]
Pfam domain/function: PF04101 Glyco_tran_28_C; PF03033 Glyco_transf_28 [H]
EC number: NA
Molecular weight: Translated: 43956; Mature: 43956
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILITTCGVGIGHSSRDVALAKLLEKKGHKIYFASYGTGLHYLQKNNYKPYNLPPMNFH CEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCEEEHCCCCCCCCCCCCCCCC HEDGVLDIEKSVKKSKDIPFTFIKSMYRESRIIKKIKPDLIITDSLYSPPITAKFLNVPC CCCCEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEECCCE YIITNDLTFGFSQNTNMTSIKYFEKSIRKFIIEISKSTNKILIPDIPESITIPKELEDKT EEEECCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHH EFIGPLLHKNPQEIDTKENLRRKYGLDNNEKILLVTIGGSDFGKELITNICAVSEEIEVD HHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCEE KIFIFTGLELNPDIFKLPSSNKKVIIKQFTYNLIEWMKLSDLTITLAGHTTSMELISIKK EEEEEECCCCCCCEEECCCCCCEEEEHHHHHHHHHHHEECCEEEEEECCCCCEEEEEECC PNIMIPIKNHIEQERNLKKMRQYNITKTIETQQKQQLLELINNTINNLDKIEINPKLYDT CCEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHH FLKYNGRENALKVIENLNNIK HHHCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MKILITTCGVGIGHSSRDVALAKLLEKKGHKIYFASYGTGLHYLQKNNYKPYNLPPMNFH CEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCEEEHCCCCCCCCCCCCCCCC HEDGVLDIEKSVKKSKDIPFTFIKSMYRESRIIKKIKPDLIITDSLYSPPITAKFLNVPC CCCCEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEECCCE YIITNDLTFGFSQNTNMTSIKYFEKSIRKFIIEISKSTNKILIPDIPESITIPKELEDKT EEEECCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHH EFIGPLLHKNPQEIDTKENLRRKYGLDNNEKILLVTIGGSDFGKELITNICAVSEEIEVD HHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCEE KIFIFTGLELNPDIFKLPSSNKKVIIKQFTYNLIEWMKLSDLTITLAGHTTSMELISIKK EEEEEECCCCCCCEEECCCCCCEEEEHHHHHHHHHHHEECCEEEEEECCCCCEEEEEECC PNIMIPIKNHIEQERNLKKMRQYNITKTIETQQKQQLLELINNTINNLDKIEINPKLYDT CCEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHH FLKYNGRENALKVIENLNNIK HHHCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12125824 [H]