Click here to switch to the map view.

The map label for this gene is hsdS

Identifier: 84489291

GI number: 84489291

Start: 564356

End: 565573

Strand: Direct

Name: hsdS

Synonym: Msp_0480

Alternate gene names: NA

Gene position: 564356-565573 (Clockwise)

Preceding gene: 84489290

Following gene: 84489292

Centisome position: 31.93

GC content: 23.81

Gene sequence:

>1218_bases
ATGTGTAAAATTACAAAAGAAAATGACTCTTTGCAAAGACAAACAGAAAATAAAGATGAAGATAGTCAGGAATTGCAATG
TAATAAAAACATACCAGAACTACGATTTCCAGAGTTTGAAGGGGAATGGATTACTTATAAATTATGTGATGTAGTAACAA
GAATCATTAGAAAAAATAAAAATTTAGAAACGAAAAGACCTTTGACTATTTCTGCTAAATACGGATTAATAGATCAAATA
GAATTTTTTGATAAATATGTGGCCAGTAAAAATTTAAAAGGATATTACTTATTAAAAAAAGGTGAATTTGCATATAATAA
AAGTTATTCTAATGGATTTCCTTATGGTGCTGTGAAAAGATTAGATTTATATAATCAAGGAGCTATATCTACATTATACA
TTTGTTTTGAAATTACAAATAAGATCAATAGTAATTTTTTAAAAATATATTTTGATTCGAATAAATGGAATAAAGAAATG
TATAAGATAGCTGTAGAAGGTGCTAGAAATCATGGATTATTAAATATACCCATTAATGATTTTTTTAATACGAAACATCT
TTTTCCTTCAATTTCTGAACAAGAAAAAATAGCTGATTTCTTATCAGCTATTGATAAAAAGATTGGGTTCATGGAAAAGG
AAATCAATAAACAATCAAAATATATGAAAAAAATAAGAGAAAATATTCTTAATGATAATTCTGATAACTCAAATAAAGTT
CAATTAAAAGAAATATGTATAATAAACAAAGGAAAACAATTAAATAAAACAAATATGATTAATGATGGAAAATATTATGT
GCTAAATGGTGGTAAAACACCGTCAGGTTTTACAAATTCATGGAACGTCCCAGAAAATACTATTAGTATTAGTGAAGGTG
GAAATTCTTGCGGATTTGTCAATTATAATGTTCAAAAATTCTATTGTGGAGGACATTGTTATTATTTAACAAATATTTCT
GATGAAATAGATCCCTTGTTATTATATCATTGTCTTAAAATGAATGAAAATAAAATTATGAATTTAAGAGTAGGTTCTGG
ACTTCCAAACATACAAAAAAAAGATTTAGAAAAGTATAAACTGTATATTCCTACAAAAAACCATGAAAAAATTACATATC
TATTAAATAATATAAATTTAAAAATAGATTTAAATAAAGAGAAATTAAATCATTTAAAACAATTTAAAAAAGGACTACTC
CAGAAAATGTTTTGTTAA

Upstream 100 bases:

>100_bases
GAAATACGTAAAATAGATGAAGAAATGAAAGAAGTAGATGCAAAAATCATAAAATATTGCAAAGAATTAGGAATAGAACC
ACCAATATAAAGGGGATTAT

Downstream 100 bases:

>100_bases
TTTATATGAAATTACACATAATACTTTATGAAAGACAACAAACATTTACTTAAATTTTCTAAGGATCGAAATATAAAAAA
TAGTACAATGAAAGGTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: S protein [H]

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MCKITKENDSLQRQTENKDEDSQELQCNKNIPELRFPEFEGEWITYKLCDVVTRIIRKNKNLETKRPLTISAKYGLIDQI
EFFDKYVASKNLKGYYLLKKGEFAYNKSYSNGFPYGAVKRLDLYNQGAISTLYICFEITNKINSNFLKIYFDSNKWNKEM
YKIAVEGARNHGLLNIPINDFFNTKHLFPSISEQEKIADFLSAIDKKIGFMEKEINKQSKYMKKIRENILNDNSDNSNKV
QLKEICIINKGKQLNKTNMINDGKYYVLNGGKTPSGFTNSWNVPENTISISEGGNSCGFVNYNVQKFYCGGHCYYLTNIS
DEIDPLLLYHCLKMNENKIMNLRVGSGLPNIQKKDLEKYKLYIPTKNHEKITYLLNNINLKIDLNKEKLNHLKQFKKGLL
QKMFC

Sequences:

>Translated_405_residues
MCKITKENDSLQRQTENKDEDSQELQCNKNIPELRFPEFEGEWITYKLCDVVTRIIRKNKNLETKRPLTISAKYGLIDQI
EFFDKYVASKNLKGYYLLKKGEFAYNKSYSNGFPYGAVKRLDLYNQGAISTLYICFEITNKINSNFLKIYFDSNKWNKEM
YKIAVEGARNHGLLNIPINDFFNTKHLFPSISEQEKIADFLSAIDKKIGFMEKEINKQSKYMKKIRENILNDNSDNSNKV
QLKEICIINKGKQLNKTNMINDGKYYVLNGGKTPSGFTNSWNVPENTISISEGGNSCGFVNYNVQKFYCGGHCYYLTNIS
DEIDPLLLYHCLKMNENKIMNLRVGSGLPNIQKKDLEKYKLYIPTKNHEKITYLLNNINLKIDLNKEKLNHLKQFKKGLL
QKMFC
>Mature_405_residues
MCKITKENDSLQRQTENKDEDSQELQCNKNIPELRFPEFEGEWITYKLCDVVTRIIRKNKNLETKRPLTISAKYGLIDQI
EFFDKYVASKNLKGYYLLKKGEFAYNKSYSNGFPYGAVKRLDLYNQGAISTLYICFEITNKINSNFLKIYFDSNKWNKEM
YKIAVEGARNHGLLNIPINDFFNTKHLFPSISEQEKIADFLSAIDKKIGFMEKEINKQSKYMKKIRENILNDNSDNSNKV
QLKEICIINKGKQLNKTNMINDGKYYVLNGGKTPSGFTNSWNVPENTISISEGGNSCGFVNYNVQKFYCGGHCYYLTNIS
DEIDPLLLYHCLKMNENKIMNLRVGSGLPNIQKKDLEKYKLYIPTKNHEKITYLLNNINLKIDLNKEKLNHLKQFKKGLL
QKMFC

Specific function: The M and S subunits together form a methyltransferase (MTase) that methylates two adenine residues in complementary strands of a bipartite DNA recognition sequence. Subunit S dictates DNA sequences specificity [H]

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type-I restriction system S methylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000055 [H]

Pfam domain/function: PF01420 Methylase_S [H]

EC number: NA

Molecular weight: Translated: 47188; Mature: 47188

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCKITKENDSLQRQTENKDEDSQELQCNKNIPELRFPEFEGEWITYKLCDVVTRIIRKNK
CCEECCCCCHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCC
NLETKRPLTISAKYGLIDQIEFFDKYVASKNLKGYYLLKKGEFAYNKSYSNGFPYGAVKR
CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCEEECCCCCCCCCCCCEEE
LDLYNQGAISTLYICFEITNKINSNFLKIYFDSNKWNKEMYKIAVEGARNHGLLNIPIND
ECCCCCCCCEEEEEEEEEHHCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCEEECCHHH
FFNTKHLFPSISEQEKIADFLSAIDKKIGFMEKEINKQSKYMKKIRENILNDNSDNSNKV
CCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
QLKEICIINKGKQLNKTNMINDGKYYVLNGGKTPSGFTNSWNVPENTISISEGGNSCGFV
EEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCEEE
NYNVQKFYCGGHCYYLTNISDEIDPLLLYHCLKMNENKIMNLRVGSGLPNIQKKDLEKYK
EECEEEEEECCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHCCCEEE
LYIPTKNHEKITYLLNNINLKIDLNKEKLNHLKQFKKGLLQKMFC
EEECCCCCCEEEEEEECEEEEEEECHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MCKITKENDSLQRQTENKDEDSQELQCNKNIPELRFPEFEGEWITYKLCDVVTRIIRKNK
CCEECCCCCHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCC
NLETKRPLTISAKYGLIDQIEFFDKYVASKNLKGYYLLKKGEFAYNKSYSNGFPYGAVKR
CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCEEECCCCCCCCCCCCEEE
LDLYNQGAISTLYICFEITNKINSNFLKIYFDSNKWNKEMYKIAVEGARNHGLLNIPIND
ECCCCCCCCEEEEEEEEEHHCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCEEECCHHH
FFNTKHLFPSISEQEKIADFLSAIDKKIGFMEKEINKQSKYMKKIRENILNDNSDNSNKV
CCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
QLKEICIINKGKQLNKTNMINDGKYYVLNGGKTPSGFTNSWNVPENTISISEGGNSCGFV
EEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCEEE
NYNVQKFYCGGHCYYLTNISDEIDPLLLYHCLKMNENKIMNLRVGSGLPNIQKKDLEKYK
EECEEEEEECCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHCCCEEE
LYIPTKNHEKITYLLNNINLKIDLNKEKLNHLKQFKKGLLQKMFC
EEECCCCCCEEEEEEECEEEEEEECHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8948633 [H]