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The map label for this gene is deaD [C]

Identifier: 84489279

GI number: 84489279

Start: 548192

End: 550435

Strand: Direct

Name: deaD [C]

Synonym: Msp_0468

Alternate gene names: 84489279

Gene position: 548192-550435 (Clockwise)

Preceding gene: 84489278

Following gene: 84489280

Centisome position: 31.02

GC content: 30.61

Gene sequence:

>2244_bases
GTGTTAAATCATACAGACCTTAGCAGATACAAAGGAAAAAGTGGAGATATTGACCTAAAAACATTAAATTGGGGTAACTA
TGACTTAGTAGTAATTGATGAATCACACAATTTCCGTAATAATCCACAATATAAAGATAAAACAACACGATATCAACGAT
TAATGAATGAAATTATAAAAAGTGGAGTAAAAACCAAAGTTCTCATGTTATCAGCAACACCTGTAAACAACAAAATGACT
GATATAAAAAATCAAATCGCACTTATCACAGAAGAACATGATGATGCCTTAACCCACATAGGAATTAACAGCATAGATTC
AACGCTTAGAACAGCACAAAAAGTATTCAATGAATGGAGTAAATTAGATGCAGAAGAACGAACTACTGAAAACTTCACAA
ACAAAGTAAATACAGACTATTTCAAGCTATTAGATACACTCACTATAGCACGTAGCCGTAAACATATCTTAAAATATTAT
GATGATAAAGAAATAGGAACATTTCCAACAAAACTAGAACCAGAAAATGTAAGATCAGAAATTGACATCAAAAATGAATT
CCCTTCAATCAAAGAAATTGATGCTATAATCAATAACCTAAATTTAAGTGTATATTCACCAGTTAAATACATCCTACCAA
ACAAAATACAAGAATATACAGAAATACTTGACCAAGAAGTTAAAGGTGGAACTTCAACATTCACCCAATTAGATCGTGAC
ACGAATATTGTCCATCTTATGAGAACCAGTCTACTAAAACGTCTGGAAAGTTCAATATACTCATTCAAGAAAACTGTACA
AAAAACGCTTAACAAAATAAACTACTGCTTAACGTTAACAACAAACAGTGTCAATTATGTTAGTGGAATTGATGAAGATT
TGTTGGACTCTGAAGAAGAATATGAAGAATATAGTTTTGGACAAAATAAAACAAAAACCATTAAATTACAAGATATGGAT
TTAATACGATGGAAAAAAGACCTAGAAACAGACAAACAACAACTAGAAGAATTATTAAAAGATGCAGAACAAATAACAGC
CCAACGTGACCAAAAATTACACAACTTAAAACAAAAAATAGACGAGAAAATTAACAACCCCATAAACAAAGACAATAAGA
AAATAATCATATTCACAACATACGCAAATACGGCAGAATACCTATATGACAACCTTCATAAAGAAATAAAAGAAAAATAC
AATCTAAACACAGCATTAGTAACAGGAGGACATAAAAATAAAACTACAATGAAAAAAGTATCTGCAAATGATATAAACGA
TGTACTATTAAATTTCTCACCAAAATCCAAAGAAAGAGAAAAAATAGAACCAGAAAAAACAGAAGAAATAGACATACTAA
TCGCTACTGACTGTATCAGTGAAGGGCAAAACTTACAAGACTGTGATTACTTAATAAACTATGACATACATTGGAATCCT
GTAAGAATCATACAAAGATTCGGAAGAATCGACCGTATAGGTTCAGCAAACAAAGAAATACAACTAGTAAACTTCTGGCC
AGACTTAGAACTAGACGAATACATAGATTTAAAAGAAAGAGTAGAAAATCGTATGGTAATGGTAAACGTTTCAGCAACAG
GAGACGAAAACTTACTAGATAAAAACAAAAAACATGAACTAGAATACAGACGAAAACAACTACAACAACTACAAGACCAA
GTAATAGAACTAGAAGACATAAGCGGTGGAATCTCAATAACAGACTTAACCTTCAACGACTTCAAAATAGAATTAATGGA
ATACAAAGACAAAAATGAAAAAGAACTAGAAAAAACACCAAACGGAACCTACTCTATTGTAAAAATACCGTCAGAACTAG
AAAATGAACTACAAAAAGGAGTGATATTCCTACTAAAAGAAACAAAAACAACAAACCAAGAAAACCCATTAAGCCCATAC
TATTTAACATACATCACAGAAGACAAAACAGTAGAATACAATTACACGCAATCTAAAAAAATAATGGACTACTATAAAAA
ACTATGCTCAGGTAAAACAGAAGTATATCAGGACCTAGTACAAATATTCAACAAAGAAACCAGAAATGGTATAAAAATGG
ATAAATATTCAGAACTATTACGACTAGCCATAGAAAATACGCAAGGAAAAACAGAAGAAGTAGGAGTAAAAAGCCTATTC
AGAAGAGGACCAACAACGCGCACAAAAAAAGATATTAATGGATTAGAAAATTATGAATTAATAACATTCTTAATATTGAT
GTGA

Upstream 100 bases:

>100_bases
ATACTAGTGCTAGTTCCTAAAAAATTAAGAGACAACTGGACAGTATACATAAAAAATGATAACGTAATATTTTTTTAATG
AAGACCGATTTAATTATGAT

Downstream 100 bases:

>100_bases
TATCTATGGATCTATACAAAGATTTGCTGAATTATCCTGATGAATGTCTAGATAATCGGAAAATTCATAAAACATTAATT
TATGAAAATGGTGATTTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: Helicase Domain-Containing Protein; Helicase; Helicase-Like; DNA-Dependent ATPase SNF2 Family Protein; Helicase Domain/SNF2 Family Domain Protein; Helicase/SNF2 Domain-Containing Protein; ATP-Dependent Helicase Hepa; Helicase Conserved C-Terminal Domain Protein; Type III Restriction Res Subunit Family; ATP-Dependent Helicase HEPA; Helicase-Like Protein; SNF2-RelatedHelicase C-Terminal:Type III Restriction; DEAD/H Helicase; DEAD/DEAH Box Helicase-Like Protein; SNF2 Family Helicase; DNA/RNA-Dependent Helicase SNF II Family Domain Protein; SNF2 Family DNA/RNA Helicase; ATP-Dependent Helicase; Superfamily II DNA/RNA Helicase SNF2 Family; Helicase DEAD/DEAH Box; DEAD/DEAH Box Helicase-Like; Type III Restriction Res Subunit; DNA/RNA Helicases SNF2 Family; Helicase C-Terminal Domain Protein; SNF2 Family; Snf2/Rad54 Family Helicase; Helicase C-Terminal Domain; Snf2 Family RNA Helicase; DNA/RNA Helicase Superfamily II

Number of amino acids: Translated: 747; Mature: 747

Protein sequence:

>747_residues
MLNHTDLSRYKGKSGDIDLKTLNWGNYDLVVIDESHNFRNNPQYKDKTTRYQRLMNEIIKSGVKTKVLMLSATPVNNKMT
DIKNQIALITEEHDDALTHIGINSIDSTLRTAQKVFNEWSKLDAEERTTENFTNKVNTDYFKLLDTLTIARSRKHILKYY
DDKEIGTFPTKLEPENVRSEIDIKNEFPSIKEIDAIINNLNLSVYSPVKYILPNKIQEYTEILDQEVKGGTSTFTQLDRD
TNIVHLMRTSLLKRLESSIYSFKKTVQKTLNKINYCLTLTTNSVNYVSGIDEDLLDSEEEYEEYSFGQNKTKTIKLQDMD
LIRWKKDLETDKQQLEELLKDAEQITAQRDQKLHNLKQKIDEKINNPINKDNKKIIIFTTYANTAEYLYDNLHKEIKEKY
NLNTALVTGGHKNKTTMKKVSANDINDVLLNFSPKSKEREKIEPEKTEEIDILIATDCISEGQNLQDCDYLINYDIHWNP
VRIIQRFGRIDRIGSANKEIQLVNFWPDLELDEYIDLKERVENRMVMVNVSATGDENLLDKNKKHELEYRRKQLQQLQDQ
VIELEDISGGISITDLTFNDFKIELMEYKDKNEKELEKTPNGTYSIVKIPSELENELQKGVIFLLKETKTTNQENPLSPY
YLTYITEDKTVEYNYTQSKKIMDYYKKLCSGKTEVYQDLVQIFNKETRNGIKMDKYSELLRLAIENTQGKTEEVGVKSLF
RRGPTTRTKKDINGLENYELITFLILM

Sequences:

>Translated_747_residues
MLNHTDLSRYKGKSGDIDLKTLNWGNYDLVVIDESHNFRNNPQYKDKTTRYQRLMNEIIKSGVKTKVLMLSATPVNNKMT
DIKNQIALITEEHDDALTHIGINSIDSTLRTAQKVFNEWSKLDAEERTTENFTNKVNTDYFKLLDTLTIARSRKHILKYY
DDKEIGTFPTKLEPENVRSEIDIKNEFPSIKEIDAIINNLNLSVYSPVKYILPNKIQEYTEILDQEVKGGTSTFTQLDRD
TNIVHLMRTSLLKRLESSIYSFKKTVQKTLNKINYCLTLTTNSVNYVSGIDEDLLDSEEEYEEYSFGQNKTKTIKLQDMD
LIRWKKDLETDKQQLEELLKDAEQITAQRDQKLHNLKQKIDEKINNPINKDNKKIIIFTTYANTAEYLYDNLHKEIKEKY
NLNTALVTGGHKNKTTMKKVSANDINDVLLNFSPKSKEREKIEPEKTEEIDILIATDCISEGQNLQDCDYLINYDIHWNP
VRIIQRFGRIDRIGSANKEIQLVNFWPDLELDEYIDLKERVENRMVMVNVSATGDENLLDKNKKHELEYRRKQLQQLQDQ
VIELEDISGGISITDLTFNDFKIELMEYKDKNEKELEKTPNGTYSIVKIPSELENELQKGVIFLLKETKTTNQENPLSPY
YLTYITEDKTVEYNYTQSKKIMDYYKKLCSGKTEVYQDLVQIFNKETRNGIKMDKYSELLRLAIENTQGKTEEVGVKSLF
RRGPTTRTKKDINGLENYELITFLILM
>Mature_747_residues
MLNHTDLSRYKGKSGDIDLKTLNWGNYDLVVIDESHNFRNNPQYKDKTTRYQRLMNEIIKSGVKTKVLMLSATPVNNKMT
DIKNQIALITEEHDDALTHIGINSIDSTLRTAQKVFNEWSKLDAEERTTENFTNKVNTDYFKLLDTLTIARSRKHILKYY
DDKEIGTFPTKLEPENVRSEIDIKNEFPSIKEIDAIINNLNLSVYSPVKYILPNKIQEYTEILDQEVKGGTSTFTQLDRD
TNIVHLMRTSLLKRLESSIYSFKKTVQKTLNKINYCLTLTTNSVNYVSGIDEDLLDSEEEYEEYSFGQNKTKTIKLQDMD
LIRWKKDLETDKQQLEELLKDAEQITAQRDQKLHNLKQKIDEKINNPINKDNKKIIIFTTYANTAEYLYDNLHKEIKEKY
NLNTALVTGGHKNKTTMKKVSANDINDVLLNFSPKSKEREKIEPEKTEEIDILIATDCISEGQNLQDCDYLINYDIHWNP
VRIIQRFGRIDRIGSANKEIQLVNFWPDLELDEYIDLKERVENRMVMVNVSATGDENLLDKNKKHELEYRRKQLQQLQDQ
VIELEDISGGISITDLTFNDFKIELMEYKDKNEKELEKTPNGTYSIVKIPSELENELQKGVIFLLKETKTTNQENPLSPY
YLTYITEDKTVEYNYTQSKKIMDYYKKLCSGKTEVYQDLVQIFNKETRNGIKMDKYSELLRLAIENTQGKTEEVGVKSLF
RRGPTTRTKKDINGLENYELITFLILM

Specific function: Has A Helix-Destabilizing Activity. Plays A Key Role In Optimal Cell Growth At Low Temperature And Is Required For Normal Cell Division. Suppressor Of A Mutant Defective In Rpsb Gene For Ribosomal Protein S2. [C]

COG id: COG0553

COG function: function code KL; Superfamily II DNA/RNA helicases, SNF2 family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 87299; Mature: 87299

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNHTDLSRYKGKSGDIDLKTLNWGNYDLVVIDESHNFRNNPQYKDKTTRYQRLMNEIIK
CCCCCCCHHHCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
SGVKTKVLMLSATPVNNKMTDIKNQIALITEEHDDALTHIGINSIDSTLRTAQKVFNEWS
CCCCEEEEEEEECCCCCHHHHHHHHEEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHH
KLDAEERTTENFTNKVNTDYFKLLDTLTIARSRKHILKYYDDKEIGTFPTKLEPENVRSE
HCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHC
IDIKNEFPSIKEIDAIINNLNLSVYSPVKYILPNKIQEYTEILDQEVKGGTSTFTQLDRD
CCCCCCCCCHHHHHHHHHCCCCEEECCHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHCCC
TNIVHLMRTSLLKRLESSIYSFKKTVQKTLNKINYCLTLTTNSVNYVSGIDEDLLDSEEE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCHHHCCCCHHHCCCHHH
YEEYSFGQNKTKTIKLQDMDLIRWKKDLETDKQQLEELLKDAEQITAQRDQKLHNLKQKI
HHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DEKINNPINKDNKKIIIFTTYANTAEYLYDNLHKEIKEKYNLNTALVTGGHKNKTTMKKV
HHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHC
SANDINDVLLNFSPKSKEREKIEPEKTEEIDILIATDCISEGQNLQDCDYLINYDIHWNP
CCCCHHHHHEECCCCCCHHHCCCCCCCCCEEEEEEEHHHHCCCCCCCCCEEEECCCCCCH
VRIIQRFGRIDRIGSANKEIQLVNFWPDLELDEYIDLKERVENRMVMVNVSATGDENLLD
HHHHHHHCCHHHCCCCCCCEEEEEECCCCCHHHHHCHHHHHCCCEEEEEEECCCCHHHHC
KNKKHELEYRRKQLQQLQDQVIELEDISGGISITDLTFNDFKIELMEYKDKNEKELEKTP
CCCHHHHHHHHHHHHHHHHHHEEHHCCCCCEEEEEEEECCEEEEEEECCCCCHHHHHHCC
NGTYSIVKIPSELENELQKGVIFLLKETKTTNQENPLSPYYLTYITEDKTVEYNYTQSKK
CCCEEEEECCHHHHHHHHHCEEEEEECCCCCCCCCCCCCEEEEEEECCCEEEECCCCHHH
IMDYYKKLCSGKTEVYQDLVQIFNKETRNGIKMDKYSELLRLAIENTQGKTEEVGVKSLF
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
RRGPTTRTKKDINGLENYELITFLILM
HCCCCCCCHHHHCCCCCHHHHHHHHCC
>Mature Secondary Structure
MLNHTDLSRYKGKSGDIDLKTLNWGNYDLVVIDESHNFRNNPQYKDKTTRYQRLMNEIIK
CCCCCCCHHHCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
SGVKTKVLMLSATPVNNKMTDIKNQIALITEEHDDALTHIGINSIDSTLRTAQKVFNEWS
CCCCEEEEEEEECCCCCHHHHHHHHEEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHH
KLDAEERTTENFTNKVNTDYFKLLDTLTIARSRKHILKYYDDKEIGTFPTKLEPENVRSE
HCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHC
IDIKNEFPSIKEIDAIINNLNLSVYSPVKYILPNKIQEYTEILDQEVKGGTSTFTQLDRD
CCCCCCCCCHHHHHHHHHCCCCEEECCHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHCCC
TNIVHLMRTSLLKRLESSIYSFKKTVQKTLNKINYCLTLTTNSVNYVSGIDEDLLDSEEE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCHHHCCCCHHHCCCHHH
YEEYSFGQNKTKTIKLQDMDLIRWKKDLETDKQQLEELLKDAEQITAQRDQKLHNLKQKI
HHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DEKINNPINKDNKKIIIFTTYANTAEYLYDNLHKEIKEKYNLNTALVTGGHKNKTTMKKV
HHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHC
SANDINDVLLNFSPKSKEREKIEPEKTEEIDILIATDCISEGQNLQDCDYLINYDIHWNP
CCCCHHHHHEECCCCCCHHHCCCCCCCCCEEEEEEEHHHHCCCCCCCCCEEEECCCCCCH
VRIIQRFGRIDRIGSANKEIQLVNFWPDLELDEYIDLKERVENRMVMVNVSATGDENLLD
HHHHHHHCCHHHCCCCCCCEEEEEECCCCCHHHHHCHHHHHCCCEEEEEEECCCCHHHHC
KNKKHELEYRRKQLQQLQDQVIELEDISGGISITDLTFNDFKIELMEYKDKNEKELEKTP
CCCHHHHHHHHHHHHHHHHHHEEHHCCCCCEEEEEEEECCEEEEEEECCCCCHHHHHHCC
NGTYSIVKIPSELENELQKGVIFLLKETKTTNQENPLSPYYLTYITEDKTVEYNYTQSKK
CCCEEEEECCHHHHHHHHHCEEEEEECCCCCCCCCCCCCEEEEEEECCCEEEECCCCHHH
IMDYYKKLCSGKTEVYQDLVQIFNKETRNGIKMDKYSELLRLAIENTQGKTEEVGVKSLF
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
RRGPTTRTKKDINGLENYELITFLILM
HCCCCCCCHHHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA