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The map label for this gene is 84489233

Identifier: 84489233

GI number: 84489233

Start: 485226

End: 485933

Strand: Direct

Name: 84489233

Synonym: Msp_0421

Alternate gene names: NA

Gene position: 485226-485933 (Clockwise)

Preceding gene: 84489232

Following gene: 84489234

Centisome position: 27.45

GC content: 25.99

Gene sequence:

>708_bases
ATGAATCTAATAGTGTTTGACATTTGGGGGGATTATGCCTATTTCAGAAGAGGATATACAACAACTTCAACATTAACATA
TCCATTTCCTAGTCGAACGACTATCGCAGGTTTTATTGCTGGTATACTTGGTTATCCAAGAAATTCCTATTATGATTTAT
TTCAGAAAGAAAATAGTAAAATAGGTTTAAAAATCATTAATCCTATTAAAAAAACCAGAATTAATTTAAATTATATTAAT
ACTAAAAATAGCATGCTTTTATCTGAAATAAAAGGTAATGGAAAAAGAACACAAGTCCCAGCAGAATTTCTTAAAAATGT
AAAATATAGAATATATCTATCTTTAGATGATGAAGAAATAATGAATAAATTATATAATACATTAAAAGAACATAAAAGTG
TTTATACACCTTATTTAGGTATAACTGAATGTTTAGCTAATTTTAGTCTTGTTGGTAAAGGTATATATTCGACTGAAAGT
ATTAAAGGTAATAATGTTGATATTAATTCTGTTGTATTAAAAGAAAGTGGTAATATTAAAATAGAACCTAAAAAACGTTA
TGGTGTTATAAAATCACCAGGTTTTATGGAGGATGATCGTAGTGTTACTTCATTTTTAGAGTATTATTATGAATCAATGG
GCAATACTATTAAACTTGAATCCTGTGAATATTATAAAGTTGGAGAAGACAATGTTATCTTATACTGA

Upstream 100 bases:

>100_bases
ATAACTTAAATTCAATTAATGAAGAAAGTAATTCTATTATTGAAGCTATAAACTCTTTAGGAATTGATACTGAAGAAATT
CAATTATAGAAGGTGTTATT

Downstream 100 bases:

>100_bases
TAAAATTAATGAACTTTATTCACACCCTCAAAAGCCTTTAACAGAACATTTGTTAAATGTAGCAGAAAATTCAAGAAGTA
TCTTTGAAAATCTTAACATA

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Cas5 Family Hmari Subtype Protein; CRISPR-Associated Cas5 Family Protein; Crispr-Associated Hmari Subtype; Cas5h Crispr-Associated Hmari Subtype; CRISPR-Associated Cas5h Family Protein; CRISPR-Associated Protein

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MNLIVFDIWGDYAYFRRGYTTTSTLTYPFPSRTTIAGFIAGILGYPRNSYYDLFQKENSKIGLKIINPIKKTRINLNYIN
TKNSMLLSEIKGNGKRTQVPAEFLKNVKYRIYLSLDDEEIMNKLYNTLKEHKSVYTPYLGITECLANFSLVGKGIYSTES
IKGNNVDINSVVLKESGNIKIEPKKRYGVIKSPGFMEDDRSVTSFLEYYYESMGNTIKLESCEYYKVGEDNVILY

Sequences:

>Translated_235_residues
MNLIVFDIWGDYAYFRRGYTTTSTLTYPFPSRTTIAGFIAGILGYPRNSYYDLFQKENSKIGLKIINPIKKTRINLNYIN
TKNSMLLSEIKGNGKRTQVPAEFLKNVKYRIYLSLDDEEIMNKLYNTLKEHKSVYTPYLGITECLANFSLVGKGIYSTES
IKGNNVDINSVVLKESGNIKIEPKKRYGVIKSPGFMEDDRSVTSFLEYYYESMGNTIKLESCEYYKVGEDNVILY
>Mature_235_residues
MNLIVFDIWGDYAYFRRGYTTTSTLTYPFPSRTTIAGFIAGILGYPRNSYYDLFQKENSKIGLKIINPIKKTRINLNYIN
TKNSMLLSEIKGNGKRTQVPAEFLKNVKYRIYLSLDDEEIMNKLYNTLKEHKSVYTPYLGITECLANFSLVGKGIYSTES
IKGNNVDINSVVLKESGNIKIEPKKRYGVIKSPGFMEDDRSVTSFLEYYYESMGNTIKLESCEYYKVGEDNVILY

Specific function: Unknown

COG id: COG1688

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27049; Mature: 27049

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLIVFDIWGDYAYFRRGYTTTSTLTYPFPSRTTIAGFIAGILGYPRNSYYDLFQKENSK
CCEEEEEECCCHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCE
IGLKIINPIKKTRINLNYINTKNSMLLSEIKGNGKRTQVPAEFLKNVKYRIYLSLDDEEI
ECEEEECCHHHHEEEEEEECCCCHHHHHHHCCCCCCCCCCHHHHCCCEEEEEEEECHHHH
MNKLYNTLKEHKSVYTPYLGITECLANFSLVGKGIYSTESIKGNNVDINSVVLKESGNIK
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCEE
IEPKKRYGVIKSPGFMEDDRSVTSFLEYYYESMGNTIKLESCEYYKVGEDNVILY
EEEHHHCCEECCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCEEEECCCCEEEC
>Mature Secondary Structure
MNLIVFDIWGDYAYFRRGYTTTSTLTYPFPSRTTIAGFIAGILGYPRNSYYDLFQKENSK
CCEEEEEECCCHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCE
IGLKIINPIKKTRINLNYINTKNSMLLSEIKGNGKRTQVPAEFLKNVKYRIYLSLDDEEI
ECEEEECCHHHHEEEEEEECCCCHHHHHHHCCCCCCCCCCHHHHCCCEEEEEEEECHHHH
MNKLYNTLKEHKSVYTPYLGITECLANFSLVGKGIYSTESIKGNNVDINSVVLKESGNIK
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCEE
IEPKKRYGVIKSPGFMEDDRSVTSFLEYYYESMGNTIKLESCEYYKVGEDNVILY
EEEHHHCCEECCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCEEEECCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA