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The map label for this gene is 84489232

Identifier: 84489232

GI number: 84489232

Start: 484255

End: 485214

Strand: Direct

Name: 84489232

Synonym: Msp_0420

Alternate gene names: NA

Gene position: 484255-485214 (Clockwise)

Preceding gene: 84489231

Following gene: 84489233

Centisome position: 27.4

GC content: 26.88

Gene sequence:

>960_bases
ATGAATAGATCAGAATTATTATTTTTATATGATATAAGTGATGCAAATCCTAATGGAGATCCATTGGATGAAAATAAACC
ACGTATAGATGAAGAAACTGAAATTAACATAGTTACTGATGTTCGTTTAAAAAGAACAATAAGAGATTACTTAGAAGAAT
TTGCAAATGAAGAACTATTTGTAAAAGAAAAAGCTGGAAAAGAGGGTGGACTTCAGGATGCTAAAACAAGAGCAGAAGAT
TATTTACCTGAAGGAAATTACGAGTCATTTGATGAAGCTAAAAATGCTTTAAAAAATAATATTTTAGAAAAATGTATTGA
TGCACGTTTGTTTGGAGGTACAATTCCTCTTGAACTTAAATTAAAGAAAAAACAAACAGGATCCATTACTCTTACAGGTC
CGGTTCAGTTTAGAATGGGTCGCTCACTACACAAAGTAGATATGCAATATATAAAAGGAACTGGTGCTTTTGCTTCTAAA
GATGGTAAAAGTCAAAAAACCTTCCGTGAAGAATACATATTGCCTTATTCTCTTATAGCATTCTATGGAGTAATAAATGA
AAATGCTGCAAAATCAACTAATTTGAGAGAAGATGATATTAATAAATTATTGGATGGAATATGGAATGGTACTAAAAACT
TAATTACAAGATCTAAATTTGGTCAAACTCCAAGATTATTGTTACAAATAGAATATTCTGAAAATAACTTCTTTATAGGT
GATTTAAACAATAAAATATCAATAAAACATGACTTTGAAAATGATAAAGAAATTAGAAATATTAATGAAATTAACTTAGT
ATACAGTCAATTACTTAATAGTTTATCTAAAAACACAGAAAAAATAAATAAAATCTATTATAAAGTGGATGATAACTTAA
ATTCAATTAATGAAGAAAGTAATTCTATTATTGAAGCTATAAACTCTTTAGGAATTGATACTGAAGAAATTCAATTATAG

Upstream 100 bases:

>100_bases
GAAAATAATTGGAAATTAAAAAAAGATGAAGTAAGTTATTACTTTGTGTTAGGCTTTACAATTGGAGATACATTTGAATT
AAAAGATGAGGCTGATAAAA

Downstream 100 bases:

>100_bases
AAGGTGTTATTATGAATCTAATAGTGTTTGACATTTGGGGGGATTATGCCTATTTCAGAAGAGGATATACAACAACTTCA
ACATTAACATATCCATTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Csh2 Family Protein; CRISPR-Associated Protein Csd2 Family; CRISPR-Associated Csd2 Family Protein; CRISPR-Associated Protein; Csd2 Family CRISPR-Associated Protein; Crispr-Associated Protein; Crispr-Associated Protein Csh2 Family; Crispr-Protein; Csh2 Family CRISPR-Associated Protein; CRISPR-Associated RAMP Csd3 Family Protein; CRISPR-Associated RAMP Protein Cmr1 Family; Cas2 Family CRISPR-Associated Protein; Csh Crispr-Associated Protein Csh2 Family; CRISPR-Associated Protein Csd3 Family

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MNRSELLFLYDISDANPNGDPLDENKPRIDEETEINIVTDVRLKRTIRDYLEEFANEELFVKEKAGKEGGLQDAKTRAED
YLPEGNYESFDEAKNALKNNILEKCIDARLFGGTIPLELKLKKKQTGSITLTGPVQFRMGRSLHKVDMQYIKGTGAFASK
DGKSQKTFREEYILPYSLIAFYGVINENAAKSTNLREDDINKLLDGIWNGTKNLITRSKFGQTPRLLLQIEYSENNFFIG
DLNNKISIKHDFENDKEIRNINEINLVYSQLLNSLSKNTEKINKIYYKVDDNLNSINEESNSIIEAINSLGIDTEEIQL

Sequences:

>Translated_319_residues
MNRSELLFLYDISDANPNGDPLDENKPRIDEETEINIVTDVRLKRTIRDYLEEFANEELFVKEKAGKEGGLQDAKTRAED
YLPEGNYESFDEAKNALKNNILEKCIDARLFGGTIPLELKLKKKQTGSITLTGPVQFRMGRSLHKVDMQYIKGTGAFASK
DGKSQKTFREEYILPYSLIAFYGVINENAAKSTNLREDDINKLLDGIWNGTKNLITRSKFGQTPRLLLQIEYSENNFFIG
DLNNKISIKHDFENDKEIRNINEINLVYSQLLNSLSKNTEKINKIYYKVDDNLNSINEESNSIIEAINSLGIDTEEIQL
>Mature_319_residues
MNRSELLFLYDISDANPNGDPLDENKPRIDEETEINIVTDVRLKRTIRDYLEEFANEELFVKEKAGKEGGLQDAKTRAED
YLPEGNYESFDEAKNALKNNILEKCIDARLFGGTIPLELKLKKKQTGSITLTGPVQFRMGRSLHKVDMQYIKGTGAFASK
DGKSQKTFREEYILPYSLIAFYGVINENAAKSTNLREDDINKLLDGIWNGTKNLITRSKFGQTPRLLLQIEYSENNFFIG
DLNNKISIKHDFENDKEIRNINEINLVYSQLLNSLSKNTEKINKIYYKVDDNLNSINEESNSIIEAINSLGIDTEEIQL

Specific function: Unknown

COG id: COG3649

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36495; Mature: 36495

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRSELLFLYDISDANPNGDPLDENKPRIDEETEINIVTDVRLKRTIRDYLEEFANEELF
CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCEE
VKEKAGKEGGLQDAKTRAEDYLPEGNYESFDEAKNALKNNILEKCIDARLFGGTIPLELK
EEECCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
LKKKQTGSITLTGPVQFRMGRSLHKVDMQYIKGTGAFASKDGKSQKTFREEYILPYSLIA
EECCCCCCEEEECCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHH
FYGVINENAAKSTNLREDDINKLLDGIWNGTKNLITRSKFGQTPRLLLQIEYSENNFFIG
HHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEEEECCCCEEEE
DLNNKISIKHDFENDKEIRNINEINLVYSQLLNSLSKNTEKINKIYYKVDDNLNSINEES
ECCCEEEEEECCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHCCHHH
NSIIEAINSLGIDTEEIQL
HHHHHHHHHHCCCHHHHCC
>Mature Secondary Structure
MNRSELLFLYDISDANPNGDPLDENKPRIDEETEINIVTDVRLKRTIRDYLEEFANEELF
CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCEE
VKEKAGKEGGLQDAKTRAEDYLPEGNYESFDEAKNALKNNILEKCIDARLFGGTIPLELK
EEECCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
LKKKQTGSITLTGPVQFRMGRSLHKVDMQYIKGTGAFASKDGKSQKTFREEYILPYSLIA
EECCCCCCEEEECCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHH
FYGVINENAAKSTNLREDDINKLLDGIWNGTKNLITRSKFGQTPRLLLQIEYSENNFFIG
HHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEEEECCCCEEEE
DLNNKISIKHDFENDKEIRNINEINLVYSQLLNSLSKNTEKINKIYYKVDDNLNSINEES
ECCCEEEEEECCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHCCHHH
NSIIEAINSLGIDTEEIQL
HHHHHHHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA