Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is 84489153
Identifier: 84489153
GI number: 84489153
Start: 393130
End: 394083
Strand: Direct
Name: 84489153
Synonym: Msp_0332
Alternate gene names: NA
Gene position: 393130-394083 (Clockwise)
Preceding gene: 84489150
Following gene: 84489155
Centisome position: 22.24
GC content: 27.88
Gene sequence:
>954_bases ATGATTACATTAGGTAAACTTACAAAAGTGAAAGATTTAAGAAAGATTTGGAATAATGAAGCAAGAGATTTCACACCTTG GTTAGCACAAGAAGAAAATCTTGAAATACTAAGTAATGAAATAGGATTGGATATTGAATTAATAGAAACTGAAGCAAAAA TAGGTTCATTCAATACAGATATACTGGCAAAAGATACCTATAGTGATGATATAATAATTATAGAAAATCAATTGGAACAG ACAGATCATGATCATCTGGGAAAAATCATAACCTATGCTTCAGGACATAATGCAAATACAATTATATGGATAGTTAAAGA GGTACGGGAAGAGCATAGACAAGCAATTGACTGGTTAAATGAACACACGGATAAGGACTTGAATATTTTTCTTATAAAAA TTGAATTATGGAAAATTGATGATTCAAGTATAGCACCAAAATTCAATATCATATCCAGTCCGAATAATTGGACAAAAACA GTAAAAAGTTCTCAGTCACCCAGAAATAATATTACTGATTTAAAATTAACTCAATTGGATTACTGGACAAAATTTTTTGA ATATCTAGATAATAATGATACTCCATTTAATCCCAGAAAACCACAACCACGACATTGGTATGATTTACCAATAGGTAATA GTTTATGTCATATCTCTTTAACAATGAATTCCAGAAAAAATGCTCTGTTTAACTATATTTACATAGATGATGATAAAGAA TTATTTGATTATTTGTCCTCTCAAAAAGATGAAATTGAAAAAGAAATGGGAATAACATTGGATTGGAAAAGGTTAAACAA TAAAAAAGCATCCATAATAGAAATCAAACATGATAATATAGATCCATTAAACGAAGAAAATTGGGATAGGATGATTAAAA TACATATAAGGGATGCAGAGAAATTCTATTTTACTTTTAAAGATAGAGTTAAAGAATATATGAATAAGGAATAA
Upstream 100 bases:
>100_bases ACAAACAGGTACTAAGACAACCTGATAACATGAGCTTCGTGGACAGAATACGTGGAAGATGCCATGAATATGTGAAAGAA TTAAAAGGATGATTTGTTAA
Downstream 100 bases:
>100_bases TATATAAAATTCATATTTCTGATATTTGATGTTATTTGATTATATAATTTTTCAAGTGTCTCTTCATCTATGCACTTTTT AAGTTGACATTCCCAGACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MITLGKLTKVKDLRKIWNNEARDFTPWLAQEENLEILSNEIGLDIELIETEAKIGSFNTDILAKDTYSDDIIIIENQLEQ TDHDHLGKIITYASGHNANTIIWIVKEVREEHRQAIDWLNEHTDKDLNIFLIKIELWKIDDSSIAPKFNIISSPNNWTKT VKSSQSPRNNITDLKLTQLDYWTKFFEYLDNNDTPFNPRKPQPRHWYDLPIGNSLCHISLTMNSRKNALFNYIYIDDDKE LFDYLSSQKDEIEKEMGITLDWKRLNNKKASIIEIKHDNIDPLNEENWDRMIKIHIRDAEKFYFTFKDRVKEYMNKE
Sequences:
>Translated_317_residues MITLGKLTKVKDLRKIWNNEARDFTPWLAQEENLEILSNEIGLDIELIETEAKIGSFNTDILAKDTYSDDIIIIENQLEQ TDHDHLGKIITYASGHNANTIIWIVKEVREEHRQAIDWLNEHTDKDLNIFLIKIELWKIDDSSIAPKFNIISSPNNWTKT VKSSQSPRNNITDLKLTQLDYWTKFFEYLDNNDTPFNPRKPQPRHWYDLPIGNSLCHISLTMNSRKNALFNYIYIDDDKE LFDYLSSQKDEIEKEMGITLDWKRLNNKKASIIEIKHDNIDPLNEENWDRMIKIHIRDAEKFYFTFKDRVKEYMNKE >Mature_317_residues MITLGKLTKVKDLRKIWNNEARDFTPWLAQEENLEILSNEIGLDIELIETEAKIGSFNTDILAKDTYSDDIIIIENQLEQ TDHDHLGKIITYASGHNANTIIWIVKEVREEHRQAIDWLNEHTDKDLNIFLIKIELWKIDDSSIAPKFNIISSPNNWTKT VKSSQSPRNNITDLKLTQLDYWTKFFEYLDNNDTPFNPRKPQPRHWYDLPIGNSLCHISLTMNSRKNALFNYIYIDDDKE LFDYLSSQKDEIEKEMGITLDWKRLNNKKASIIEIKHDNIDPLNEENWDRMIKIHIRDAEKFYFTFKDRVKEYMNKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37652; Mature: 37652
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITLGKLTKVKDLRKIWNNEARDFTPWLAQEENLEILSNEIGLDIELIETEAKIGSFNTD CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCCCC ILAKDTYSDDIIIIENQLEQTDHDHLGKIITYASGHNANTIIWIVKEVREEHRQAIDWLN EEEECCCCCCEEEEECCCCCCCHHHHCCEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHH EHTDKDLNIFLIKIELWKIDDSSIAPKFNIISSPNNWTKTVKSSQSPRNNITDLKLTQLD HCCCCCCEEEEEEEEEEEECCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCEEEHHHH YWTKFFEYLDNNDTPFNPRKPQPRHWYDLPIGNSLCHISLTMNSRKNALFNYIYIDDDKE HHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEECCCCCEEEEEEEECCCHH LFDYLSSQKDEIEKEMGITLDWKRLNNKKASIIEIKHDNIDPLNEENWDRMIKIHIRDAE HHHHHCCCHHHHHHHHCCEEEHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEECCC KFYFTFKDRVKEYMNKE EEEEEHHHHHHHHHCCC >Mature Secondary Structure MITLGKLTKVKDLRKIWNNEARDFTPWLAQEENLEILSNEIGLDIELIETEAKIGSFNTD CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCCCC ILAKDTYSDDIIIIENQLEQTDHDHLGKIITYASGHNANTIIWIVKEVREEHRQAIDWLN EEEECCCCCCEEEEECCCCCCCHHHHCCEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHH EHTDKDLNIFLIKIELWKIDDSSIAPKFNIISSPNNWTKTVKSSQSPRNNITDLKLTQLD HCCCCCCEEEEEEEEEEEECCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCEEEHHHH YWTKFFEYLDNNDTPFNPRKPQPRHWYDLPIGNSLCHISLTMNSRKNALFNYIYIDDDKE HHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEECCCCCEEEEEEEECCCHH LFDYLSSQKDEIEKEMGITLDWKRLNNKKASIIEIKHDNIDPLNEENWDRMIKIHIRDAE HHHHHCCCHHHHHHHHCCEEEHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEECCC KFYFTFKDRVKEYMNKE EEEEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA