Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is mptA
Identifier: 84489115
GI number: 84489115
Start: 355680
End: 356621
Strand: Direct
Name: mptA
Synonym: Msp_0294
Alternate gene names: 84489115
Gene position: 355680-356621 (Clockwise)
Preceding gene: 84489114
Following gene: 84489116
Centisome position: 20.12
GC content: 31.0
Gene sequence:
>942_bases ATGACAGTTTCAGAATTTCCAGATACTCAGGATAAACAACCATCCATTCCAATATCACTAACAAGAGTTGGAGTAACAGG TGTAAAGAAATTAATAAAAATAAAAAGAGAAGATAAACGTCCTATTATTCTAATACCAACATTTGATGCTTTTGTAGATT TACCTAGTACTCAGAAAGGAGTACACATGTCTAGAAATCCAGAAGCTATATCTGAAATTGTTGATGAGGCTGCAAATCAA TCGGAAATTCATCTTGAAAATATATGTGCAAATCTTGTAAAAAGATTACTTGAAAAACATGAATATGCATTACATGCAGA AACAGAGGCAAGGGGAGAATATATTATAAATAAATTATCTCCAGTATCTAAAAGAAAAACACAGGAAACAACACATATCA TAGCAAGAGCAATTGCTATGAAAGATGATGAGGGTAATATTTCTGTTAGAAAAATGATTGGTGCAGAAGTTATTGGAATG ACTGTATGTCCATGTGCACAAGAATCTGTTGAAAAGGATTCTAAAGATAAATTACTGGAATTTTTAGATGAAGAAACTAC ACAAAAAGTGTTGGATGTAGTAACATTTGCTTCTCATAATCAAAGGGGTGTTGGGACAATACTTCTTGAAGTACCAGAAA AACAAGATGTTAATGTGGATGATTTAATAAAAATAATACAGGATGCTATGAGTTCTCCTGTTTGTGAAATATTAAAACGT CCAGATGAAAATAGAATTGTAACAAATGCACATCAAAATCCAGTATTTGTTGAGGATTGTGTAAGAAACATGGTAATAGG ATTACTTGAAAAATATCCTAATTTACCTGATGATTCTGTAGTTACAATTAAACAAGTAAATCAAGAAAGTATTCATCAAC ATAATGCTTATGCTGAAAAAGTTGCATCTTTTGGTAAATTACGAGAAGAAAATAAGGAGTAG
Upstream 100 bases:
>100_bases TAATTAGTATTATAATGATATTTTAAGAAGATTACATGAAAAAAGTATATTTTACATTTTTAATAAAAACTATTAATAGA AACAGAGGGAGTTATAAATA
Downstream 100 bases:
>100_bases ATAATATGGAAGTAATGGAAGTATCACGTAAAATTATGGATTATCTTGATGCATTTAAAGGTTCAAAACCTGTTGTTCAT AATTCAGAAGCAATGATTAT
Product: GTP cyclohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MTVSEFPDTQDKQPSIPISLTRVGVTGVKKLIKIKREDKRPIILIPTFDAFVDLPSTQKGVHMSRNPEAISEIVDEAANQ SEIHLENICANLVKRLLEKHEYALHAETEARGEYIINKLSPVSKRKTQETTHIIARAIAMKDDEGNISVRKMIGAEVIGM TVCPCAQESVEKDSKDKLLEFLDEETTQKVLDVVTFASHNQRGVGTILLEVPEKQDVNVDDLIKIIQDAMSSPVCEILKR PDENRIVTNAHQNPVFVEDCVRNMVIGLLEKYPNLPDDSVVTIKQVNQESIHQHNAYAEKVASFGKLREENKE
Sequences:
>Translated_313_residues MTVSEFPDTQDKQPSIPISLTRVGVTGVKKLIKIKREDKRPIILIPTFDAFVDLPSTQKGVHMSRNPEAISEIVDEAANQ SEIHLENICANLVKRLLEKHEYALHAETEARGEYIINKLSPVSKRKTQETTHIIARAIAMKDDEGNISVRKMIGAEVIGM TVCPCAQESVEKDSKDKLLEFLDEETTQKVLDVVTFASHNQRGVGTILLEVPEKQDVNVDDLIKIIQDAMSSPVCEILKR PDENRIVTNAHQNPVFVEDCVRNMVIGLLEKYPNLPDDSVVTIKQVNQESIHQHNAYAEKVASFGKLREENKE >Mature_312_residues TVSEFPDTQDKQPSIPISLTRVGVTGVKKLIKIKREDKRPIILIPTFDAFVDLPSTQKGVHMSRNPEAISEIVDEAANQS EIHLENICANLVKRLLEKHEYALHAETEARGEYIINKLSPVSKRKTQETTHIIARAIAMKDDEGNISVRKMIGAEVIGMT VCPCAQESVEKDSKDKLLEFLDEETTQKVLDVVTFASHNQRGVGTILLEVPEKQDVNVDDLIKIIQDAMSSPVCEILKRP DENRIVTNAHQNPVFVEDCVRNMVIGLLEKYPNLPDDSVVTIKQVNQESIHQHNAYAEKVASFGKLREENKE
Specific function: Converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate, the first intermediate in the biosynthesis of coenzyme methanopterin
COG id: COG1469
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase IV family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MPTA_METST (Q2NI42)
Other databases:
- EMBL: CP000102 - RefSeq: YP_447347.1 - ProteinModelPortal: Q2NI42 - STRING: Q2NI42 - GeneID: 3854941 - GenomeReviews: CP000102_GR - KEGG: mst:Msp_0294 - NMPDR: fig|339860.6.peg.285 - eggNOG: arNOG04823 - HOGENOM: HBG626871 - OMA: ILIPTFD - ProtClustDB: PRK13675 - BioCyc: MSTA339860:MSP_0294-MONOMER - HAMAP: MF_01527_A - InterPro: IPR003801 - InterPro: IPR022840 - InterPro: IPR002042 - Gene3D: G3DSA:3.10.270.10 - TIGRFAMs: TIGR00294
Pfam domain/function: PF02649 DUF198
EC number: NA
Molecular weight: Translated: 35166; Mature: 35034
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSEFPDTQDKQPSIPISLTRVGVTGVKKLIKIKREDKRPIILIPTFDAFVDLPSTQKG CCCCCCCCCCCCCCCCCEEEEHHCHHHHHHHHHHHHCCCCCEEEEECHHHHHCCCCCCCC VHMSRNPEAISEIVDEAANQSEIHLENICANLVKRLLEKHEYALHAETEARGEYIINKLS CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHCC PVSKRKTQETTHIIARAIAMKDDEGNISVRKMIGAEVIGMTVCPCAQESVEKDSKDKLLE CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECCCCHHHHCCCCHHHHHH FLDEETTQKVLDVVTFASHNQRGVGTILLEVPEKQDVNVDDLIKIIQDAMSSPVCEILKR HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHC PDENRIVTNAHQNPVFVEDCVRNMVIGLLEKYPNLPDDSVVTIKQVNQESIHQHNAYAEK CCCCCEEECCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCEEEHHHCCHHHHHHHHHHHHH VASFGKLREENKE HHHHHHHHHCCCC >Mature Secondary Structure TVSEFPDTQDKQPSIPISLTRVGVTGVKKLIKIKREDKRPIILIPTFDAFVDLPSTQKG CCCCCCCCCCCCCCCCEEEEHHCHHHHHHHHHHHHCCCCCEEEEECHHHHHCCCCCCCC VHMSRNPEAISEIVDEAANQSEIHLENICANLVKRLLEKHEYALHAETEARGEYIINKLS CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHCC PVSKRKTQETTHIIARAIAMKDDEGNISVRKMIGAEVIGMTVCPCAQESVEKDSKDKLLE CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECCCCHHHHCCCCHHHHHH FLDEETTQKVLDVVTFASHNQRGVGTILLEVPEKQDVNVDDLIKIIQDAMSSPVCEILKR HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHC PDENRIVTNAHQNPVFVEDCVRNMVIGLLEKYPNLPDDSVVTIKQVNQESIHQHNAYAEK CCCCCEEECCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCEEEHHHCCHHHHHHHHHHHHH VASFGKLREENKE HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA