Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is 84489044
Identifier: 84489044
GI number: 84489044
Start: 269029
End: 270165
Strand: Direct
Name: 84489044
Synonym: Msp_0216
Alternate gene names: NA
Gene position: 269029-270165 (Clockwise)
Preceding gene: 84489043
Following gene: 84489045
Centisome position: 15.22
GC content: 18.91
Gene sequence:
>1137_bases ATGCCTGATAATAATTGTGATGAGGATGTTTTAGAAATAATAGATTATTATAAAACTCAAAGTAACATCCCAATATCTGT AATGAAACAAGAATTTAACTATAATCAAGTAAATGGTGAATATATATTCTTATGTAATTCTAAAGATTGGTTATCTATGG TAGCTTTAGATTATATTTATAATATTGCTAAAGAAAATAATTCTGACATTGTACTAAGTTCAGTAAATATTTATGATGAG AAATTAAAATCCATATATGAATTAGATTATGGTTTAAGTAATGATTTTATGAATTCTAATTCATTATCTCATAAATTATT TTCAAATGAACTTTTTAGTATGGTAAAATATCCATATAATCTTTATAAAACTTCGTTTTTAGAGAAAATAGATGCGGATT TAAATTTAAATGAATATGATATTGGATTTTTCTTCTTTAAAACTGTTTTCAATACATCAAAAATTTCATTTAGTATGGAA CCTATTTTGAATATAAGAAAAAAAGAAAGTGATCTATATTATTTTATGGCTAATGATTTTAATAGAAACTTAAATAAAGA ATATGTTTCATTTGACGTAGATTCTTTTTTCAAGAGTATGGAGAATATAAAATCTTTTTTTAGAGAAAAAGGAATATATG ATCTTTATAAATATGATTTAACTAATTATTTTATGAATATATATAGAAATATTTGTACTTTTAATATGGAAAATGAAGAA GTTTTTTATAAAAAATTACATGAAACTATTCTAAATTATTATAAAACAAATCATACAGATTATCTATTAAATTTAACTTC ACCTAATATGGAATTTTATAGAATTCTTCTAAAATCAAAAAGTAAATTTGAAGTAGATGCTTTATATAAAATAAATGATT TAAAACTTGAAAATGAAAAATTAAGTAGAGAAGTTAATAAGTTAACTAAATTATTAAAAGAAGAAAAAAACTTAAAAAAT AAAGAAATAAAACAAAATAAAAAAATAAGACATAAATTAGATGAAGTTTTAAATTCTAATTCATGGAAATTAATGAATGG ATTTAGAATGATAGGACTTTATAAGTCAGTTGCTTTAGTTATTTTTATTCTTTTATTAATTATTTCTATTATGATTATTT TAATAATAAAATATTAA
Upstream 100 bases:
>100_bases AATTTCTCTCTGTTTATCAGTTTTTCCAGATAAAAAATCAACAGCAGAGTGTTTTGAAAGCTTACTTAATCAAACATTAG ATGAAATTGAAATTATATGT
Downstream 100 bases:
>100_bases TTAAATACAACAAACATATATTAAAAATCGTGATAATTATGAAAATTGGGATTGTACTTGGAACTAGACCTGAAATAATT AAAATGGCGCCTGTAATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MPDNNCDEDVLEIIDYYKTQSNIPISVMKQEFNYNQVNGEYIFLCNSKDWLSMVALDYIYNIAKENNSDIVLSSVNIYDE KLKSIYELDYGLSNDFMNSNSLSHKLFSNELFSMVKYPYNLYKTSFLEKIDADLNLNEYDIGFFFFKTVFNTSKISFSME PILNIRKKESDLYYFMANDFNRNLNKEYVSFDVDSFFKSMENIKSFFREKGIYDLYKYDLTNYFMNIYRNICTFNMENEE VFYKKLHETILNYYKTNHTDYLLNLTSPNMEFYRILLKSKSKFEVDALYKINDLKLENEKLSREVNKLTKLLKEEKNLKN KEIKQNKKIRHKLDEVLNSNSWKLMNGFRMIGLYKSVALVIFILLLIISIMIILIIKY
Sequences:
>Translated_378_residues MPDNNCDEDVLEIIDYYKTQSNIPISVMKQEFNYNQVNGEYIFLCNSKDWLSMVALDYIYNIAKENNSDIVLSSVNIYDE KLKSIYELDYGLSNDFMNSNSLSHKLFSNELFSMVKYPYNLYKTSFLEKIDADLNLNEYDIGFFFFKTVFNTSKISFSME PILNIRKKESDLYYFMANDFNRNLNKEYVSFDVDSFFKSMENIKSFFREKGIYDLYKYDLTNYFMNIYRNICTFNMENEE VFYKKLHETILNYYKTNHTDYLLNLTSPNMEFYRILLKSKSKFEVDALYKINDLKLENEKLSREVNKLTKLLKEEKNLKN KEIKQNKKIRHKLDEVLNSNSWKLMNGFRMIGLYKSVALVIFILLLIISIMIILIIKY >Mature_377_residues PDNNCDEDVLEIIDYYKTQSNIPISVMKQEFNYNQVNGEYIFLCNSKDWLSMVALDYIYNIAKENNSDIVLSSVNIYDEK LKSIYELDYGLSNDFMNSNSLSHKLFSNELFSMVKYPYNLYKTSFLEKIDADLNLNEYDIGFFFFKTVFNTSKISFSMEP ILNIRKKESDLYYFMANDFNRNLNKEYVSFDVDSFFKSMENIKSFFREKGIYDLYKYDLTNYFMNIYRNICTFNMENEEV FYKKLHETILNYYKTNHTDYLLNLTSPNMEFYRILLKSKSKFEVDALYKINDLKLENEKLSREVNKLTKLLKEEKNLKNK EIKQNKKIRHKLDEVLNSNSWKLMNGFRMIGLYKSVALVIFILLLIISIMIILIIKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45309; Mature: 45178
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDNNCDEDVLEIIDYYKTQSNIPISVMKQEFNYNQVNGEYIFLCNSKDWLSMVALDYIY CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEECCCEEEEECCCHHHHHHHHHHHH NIAKENNSDIVLSSVNIYDEKLKSIYELDYGLSNDFMNSNSLSHKLFSNELFSMVKYPYN HHHCCCCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHH LYKTSFLEKIDADLNLNEYDIGFFFFKTVFNTSKISFSMEPILNIRKKESDLYYFMANDF HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCEEEEEECCC NRNLNKEYVSFDVDSFFKSMENIKSFFREKGIYDLYKYDLTNYFMNIYRNICTFNMENEE CCCCCHHHHEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH VFYKKLHETILNYYKTNHTDYLLNLTSPNMEFYRILLKSKSKFEVDALYKINDLKLENEK HHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCEEEEEEECCCEECHHH LSREVNKLTKLLKEEKNLKNKEIKQNKKIRHKLDEVLNSNSWKLMNGFRMIGLYKSVALV HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH IFILLLIISIMIILIIKY HHHHHHHHHHHHHHHHCC >Mature Secondary Structure PDNNCDEDVLEIIDYYKTQSNIPISVMKQEFNYNQVNGEYIFLCNSKDWLSMVALDYIY CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEECCCEEEEECCCHHHHHHHHHHHH NIAKENNSDIVLSSVNIYDEKLKSIYELDYGLSNDFMNSNSLSHKLFSNELFSMVKYPYN HHHCCCCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHH LYKTSFLEKIDADLNLNEYDIGFFFFKTVFNTSKISFSMEPILNIRKKESDLYYFMANDF HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCEEEEEECCC NRNLNKEYVSFDVDSFFKSMENIKSFFREKGIYDLYKYDLTNYFMNIYRNICTFNMENEE CCCCCHHHHEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH VFYKKLHETILNYYKTNHTDYLLNLTSPNMEFYRILLKSKSKFEVDALYKINDLKLENEK HHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCEEEEEEECCCEECHHH LSREVNKLTKLLKEEKNLKNKEIKQNKKIRHKLDEVLNSNSWKLMNGFRMIGLYKSVALV HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH IFILLLIISIMIILIIKY HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA