Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is wecB [H]
Identifier: 84489045
GI number: 84489045
Start: 270204
End: 271517
Strand: Direct
Name: wecB [H]
Synonym: Msp_0217
Alternate gene names: 84489045
Gene position: 270204-271517 (Clockwise)
Preceding gene: 84489044
Following gene: 84489051
Centisome position: 15.29
GC content: 29.38
Gene sequence:
>1314_bases ATGAAAATTGGGATTGTACTTGGAACTAGACCTGAAATAATTAAAATGGCGCCTGTAATTGATGAAATAAAAAGAAATAA TTCTGAATTAGTTCTCATACACACAGGACAACATTATGATATTAACATGTCAAAACAATTTTTTATTGACCTGGATTTAC CCTTACCTCAATATAATATTGGTATAGGCTCAAATACTGCTATTAAACAAATAAGTATCATCATATCAAAACTTGAAGAA ATACTAAAAAAGGAAGAAGTTGACATAGTATTAGTTCAAGGAGACACAAATGCAGTATTAGCAGGAGCATTAGCTGCAAA TAAACTTAAAATTCCTGTAGGACATGTGGAGGCAGGACTAAGATCATTTGATAAGAACATGCCCGAAGAAATAAATAGAT TGGTTGCAGATAGTTGTTCTACACTCTACTTTGTACCAACAAAGGAAACTGGAATAAATCTATTAAATGAGGGAATCAGT CATAAATCAATCTATGTTACAGGTAATACTGTGGTAGATGCATGTAAAAGAAACATAAATCTTGCACTTAAAAATAGTAA GATAAAAGATGAAATAAAATTCAATAATTACATAGCACTAACACTACACAGAGCAGAAAATGTGGATGATGATGAAAGAC TAATAAACATAGTTAATAGTCTTATTAATTTACCATATAACATAGTATTTCCAATACACCCACATACAAGAAAATCTCTT GAAAAACTAGATTTATACAAGAAAATTGAAGAATCAGAACATATTCAAATAATAAAACCATTAGGATATCTTGACTTCCT ATATTTAATATCACAAGCTACCCTAGCACTAACAGATTCTGGTGGAGTACAAGAAGAAGCAATAACACTTGATGTTCCAT GTGTTACATTAAGATATAATACAGAAAGACCAGAAACAATTACATGTGGTGGAAATGTACTTGCAGGAACAGAATCAGAG GAGATTACAAGAAATATTAGCAACATACTAAATAATGAATCAGTATATGAAAGTATGAGCAGTGCTAAAAATCCATATGG TGATGGAGACAGTGCAAAACAAATATATTCAATAATAGAAGAACATTACAATGAAAACAACCTTAAAATAACTCGTGCAG ATAAGATAATGGACTTTGAAGGATACTATATGTATGTTATTCAAGAGAATATTACAGTAGCAGAATATGAAAATAAAAAT AAGGGACAAATCATTGAACAAGTATTTACTAATGGAAGGCCAGAATATATAGAAGAACAATTAAATCTAGAAAATAAAAC AATTATAGTAAAAAAATTTGAAAATGAAGATTAA
Upstream 100 bases:
>100_bases TAGTTATTTTTATTCTTTTATTAATTATTTCTATTATGATTATTTTAATAATAAAATATTAATTAAATACAACAAACATA TATTAAAAATCGTGATAATT
Downstream 100 bases:
>100_bases ATACTTTCTTTTTTCATCTTTTAAAAAAACTATTAGATAATGTTGAAATATTATTAAGGATAATTATTAAGACTTAGATT TATTTTCAATATAATCTAAT
Product: UDP-N-acetylglucosamine 2-epimerase
Products: NA
Alternate protein names: UDP-GlcNAc-2-epimerase [H]
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MKIGIVLGTRPEIIKMAPVIDEIKRNNSELVLIHTGQHYDINMSKQFFIDLDLPLPQYNIGIGSNTAIKQISIIISKLEE ILKKEEVDIVLVQGDTNAVLAGALAANKLKIPVGHVEAGLRSFDKNMPEEINRLVADSCSTLYFVPTKETGINLLNEGIS HKSIYVTGNTVVDACKRNINLALKNSKIKDEIKFNNYIALTLHRAENVDDDERLINIVNSLINLPYNIVFPIHPHTRKSL EKLDLYKKIEESEHIQIIKPLGYLDFLYLISQATLALTDSGGVQEEAITLDVPCVTLRYNTERPETITCGGNVLAGTESE EITRNISNILNNESVYESMSSAKNPYGDGDSAKQIYSIIEEHYNENNLKITRADKIMDFEGYYMYVIQENITVAEYENKN KGQIIEQVFTNGRPEYIEEQLNLENKTIIVKKFENED
Sequences:
>Translated_437_residues MKIGIVLGTRPEIIKMAPVIDEIKRNNSELVLIHTGQHYDINMSKQFFIDLDLPLPQYNIGIGSNTAIKQISIIISKLEE ILKKEEVDIVLVQGDTNAVLAGALAANKLKIPVGHVEAGLRSFDKNMPEEINRLVADSCSTLYFVPTKETGINLLNEGIS HKSIYVTGNTVVDACKRNINLALKNSKIKDEIKFNNYIALTLHRAENVDDDERLINIVNSLINLPYNIVFPIHPHTRKSL EKLDLYKKIEESEHIQIIKPLGYLDFLYLISQATLALTDSGGVQEEAITLDVPCVTLRYNTERPETITCGGNVLAGTESE EITRNISNILNNESVYESMSSAKNPYGDGDSAKQIYSIIEEHYNENNLKITRADKIMDFEGYYMYVIQENITVAEYENKN KGQIIEQVFTNGRPEYIEEQLNLENKTIIVKKFENED >Mature_437_residues MKIGIVLGTRPEIIKMAPVIDEIKRNNSELVLIHTGQHYDINMSKQFFIDLDLPLPQYNIGIGSNTAIKQISIIISKLEE ILKKEEVDIVLVQGDTNAVLAGALAANKLKIPVGHVEAGLRSFDKNMPEEINRLVADSCSTLYFVPTKETGINLLNEGIS HKSIYVTGNTVVDACKRNINLALKNSKIKDEIKFNNYIALTLHRAENVDDDERLINIVNSLINLPYNIVFPIHPHTRKSL EKLDLYKKIEESEHIQIIKPLGYLDFLYLISQATLALTDSGGVQEEAITLDVPCVTLRYNTERPETITCGGNVLAGTESE EITRNISNILNNESVYESMSSAKNPYGDGDSAKQIYSIIEEHYNENNLKITRADKIMDFEGYYMYVIQENITVAEYENKN KGQIIEQVFTNGRPEYIEEQLNLENKTIIVKKFENED
Specific function: Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) to produce UDP-N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues [H]
COG id: COG0381
COG function: function code M; UDP-N-acetylglucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-N-acetylglucosamine 2-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI48994967, Length=377, Percent_Identity=35.2785145888594, Blast_Score=196, Evalue=2e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003331 [H]
Pfam domain/function: PF02350 Epimerase_2 [H]
EC number: =5.1.3.14 [H]
Molecular weight: Translated: 49351; Mature: 49351
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGIVLGTRPEIIKMAPVIDEIKRNNSELVLIHTGQHYDINMSKQFFIDLDLPLPQYNI CEEEEEECCCCCCEEHHHHHHHHHCCCCCEEEEECCCEEEECCCCEEEEEECCCCCCEEE GIGSNTAIKQISIIISKLEEILKKEEVDIVLVQGDTNAVLAGALAANKLKIPVGHVEAGL CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEHCCCEEECCHHHHHHHH RSFDKNMPEEINRLVADSCSTLYFVPTKETGINLLNEGISHKSIYVTGNTVVDACKRNIN HHHHCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCCCCCEEEEECCHHHHHHHCCCE LALKNSKIKDEIKFNNYIALTLHRAENVDDDERLINIVNSLINLPYNIVFPIHPHTRKSL EEEECCCCCCCEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCHHHHH EKLDLYKKIEESEHIQIIKPLGYLDFLYLISQATLALTDSGGVQEEAITLDVPCVTLRYN HHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCEEEEECCCCCCCCEEEEECCEEEEEEC TERPETITCGGNVLAGTESEEITRNISNILNNESVYESMSSAKNPYGDGDSAKQIYSIIE CCCCCEEEECCCEEECCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHH EHYNENNLKITRADKIMDFEGYYMYVIQENITVAEYENKNKGQIIEQVFTNGRPEYIEEQ HHCCCCCEEEEECCEEEECCCEEEEEEECCEEEEEECCCCCHHHHHHHHHCCCHHHHHHH LNLENKTIIVKKFENED HCCCCCEEEEEECCCCC >Mature Secondary Structure MKIGIVLGTRPEIIKMAPVIDEIKRNNSELVLIHTGQHYDINMSKQFFIDLDLPLPQYNI CEEEEEECCCCCCEEHHHHHHHHHCCCCCEEEEECCCEEEECCCCEEEEEECCCCCCEEE GIGSNTAIKQISIIISKLEEILKKEEVDIVLVQGDTNAVLAGALAANKLKIPVGHVEAGL CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEHCCCEEECCHHHHHHHH RSFDKNMPEEINRLVADSCSTLYFVPTKETGINLLNEGISHKSIYVTGNTVVDACKRNIN HHHHCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCCCCCEEEEECCHHHHHHHCCCE LALKNSKIKDEIKFNNYIALTLHRAENVDDDERLINIVNSLINLPYNIVFPIHPHTRKSL EEEECCCCCCCEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCHHHHH EKLDLYKKIEESEHIQIIKPLGYLDFLYLISQATLALTDSGGVQEEAITLDVPCVTLRYN HHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCEEEEECCCCCCCCEEEEECCEEEEEEC TERPETITCGGNVLAGTESEEITRNISNILNNESVYESMSSAKNPYGDGDSAKQIYSIIE CCCCCEEEECCCEEECCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHH EHYNENNLKITRADKIMDFEGYYMYVIQENITVAEYENKNKGQIIEQVFTNGRPEYIEEQ HHCCCCCEEEEECCEEEECCCEEEEEEECCEEEEEECCCCCHHHHHHHHHCCCHHHHHHH LNLENKTIIVKKFENED HCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]