Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is 84489037
Identifier: 84489037
GI number: 84489037
Start: 256626
End: 258209
Strand: Direct
Name: 84489037
Synonym: Msp_0209
Alternate gene names: NA
Gene position: 256626-258209 (Clockwise)
Preceding gene: 84489036
Following gene: 84489038
Centisome position: 14.52
GC content: 27.4
Gene sequence:
>1584_bases ATGAATATAAATTTTAATAAAAAGAAATATTTGCTAATTCCATTAATACTAGCAGCCATACTTTCTTTATCTGTATTATT TAGTAGTAAATGGCCACTTAGTTGGGATATATACACTCATATCAATTATGCAATAACATATATTAATTATGGAATCACAA CAGTAGATCCATACTTAAATGCACCTAATGGTAAGGAAATTGGTTATGTACCATTATTTCATATATTGTTAATAGTTATT TCATCAATTACAAATACTAGTCTTATTGATACGGCTCGTATAATTCAAACAATAACTCCAGTTATTATAACATCAATAAT TGTATATGTTACATATAAAATGTATGATGAGGTAGCAGCTATCGTTGCTGGTATATTATTAGTATCTAGTTTCATGTTTA CACGATTACTACTTCCTATTCCCGAAACAATAGCATTAATCGTGTTTATAATAGGTGTTTATTTATTTTATCAATCAACT ATTGATAATAAAATGATTTATGCATTCATATCTGGATTTTTAACATTGCCTCTTATGGGAATACATTTTTCATCATGTGT CTATTATGTGATATTAATTTCAGTGTTGATGATTGCACAATGTATTATTCAAGGAAAACTTGTTGGACTTAAATCATATG GAGTTTTCTTGTTGGCATTAATTATTGTTGGACTTTGTGGAGTATTTGCTTTAATAACATATAGCCCATCACATTTATCT CAGTTTATAACTGGATTTAATTCAGTATTAAATGACCCTCTTTCATTGTTTATGGGTCAAAAAGCAATGGGATTAGAACG TTACATAAAATGTGTAGGTCTATTACCTCTAGTTTGTGGTTTTATAGGCCTTTGTTTATCTTTTAGAAATAGGGAAGTGT TATTTGTTAGTGCATGGACATTAATTGCATTTATATTTAGTAATATGCACTGGTTTGGAATACCTGTGTATACATTTAGA ATGCTTATTTATCTATTAATACCTCTTGTTATACTTGGAGGATATGGTGTTTCAAAGATATACGGGTATTTAATAAATAC TAATAAAAAACAACAAGGTGTAATATTAATATTACTCTTAATAATTCTATCATATGGTTGTGGATATATGTCAATACATG ATGATTCTGCAAAGATTACATCAGCATCCACCCAAATAGGTGATTATCAAATAGCTCCACCTACATCAGATGAAGAAGAA GTAATAAATTGGTTTAAAAATGAAGATACACAAAACAAATCAATACTTACAAACAACCAATTCTTTGGTACAGTAGTATC AAGTATAGATGAAATTCCACTACATTATAAATTTGATGTATATACAAATAAATCATCACAAAAATCATCATTAAAAACAT TTAATAATGAAAAGATAGGTTATATTATATATGATAAAACACTCGTTGTAAATAATTCCTCAGATTATAGTAATCTGGAG GTAATCTCTGTAAATGGAAGTTATTATCCATCCTATTACTTTACCAAGGAAATAACTGAAAAAAACTTCGATCAAATAAA ACTAACGAACACTGAGAAGGTATTTGAAAATAACAGATTCATAATATGTAAGATAAAGTCTTAA
Upstream 100 bases:
>100_bases GTTGAAAACTGGTCTATAATGTTGGATATTCGTATCTTTTTTAAAACATTACCTGCTCTATTAAATGATAAAAACGCATA CTAAAGAAGTTGATATAATT
Downstream 100 bases:
>100_bases ATTCAAATGGAGGGAAATTACATGAATATTACAATAATTGGGACAGGATATGTGGGATTAGTAACAGGTACTTGTTTTTC AGAGATGGGAAATGAAGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 527; Mature: 527
Protein sequence:
>527_residues MNINFNKKKYLLIPLILAAILSLSVLFSSKWPLSWDIYTHINYAITYINYGITTVDPYLNAPNGKEIGYVPLFHILLIVI SSITNTSLIDTARIIQTITPVIITSIIVYVTYKMYDEVAAIVAGILLVSSFMFTRLLLPIPETIALIVFIIGVYLFYQST IDNKMIYAFISGFLTLPLMGIHFSSCVYYVILISVLMIAQCIIQGKLVGLKSYGVFLLALIIVGLCGVFALITYSPSHLS QFITGFNSVLNDPLSLFMGQKAMGLERYIKCVGLLPLVCGFIGLCLSFRNREVLFVSAWTLIAFIFSNMHWFGIPVYTFR MLIYLLIPLVILGGYGVSKIYGYLINTNKKQQGVILILLLIILSYGCGYMSIHDDSAKITSASTQIGDYQIAPPTSDEEE VINWFKNEDTQNKSILTNNQFFGTVVSSIDEIPLHYKFDVYTNKSSQKSSLKTFNNEKIGYIIYDKTLVVNNSSDYSNLE VISVNGSYYPSYYFTKEITEKNFDQIKLTNTEKVFENNRFIICKIKS
Sequences:
>Translated_527_residues MNINFNKKKYLLIPLILAAILSLSVLFSSKWPLSWDIYTHINYAITYINYGITTVDPYLNAPNGKEIGYVPLFHILLIVI SSITNTSLIDTARIIQTITPVIITSIIVYVTYKMYDEVAAIVAGILLVSSFMFTRLLLPIPETIALIVFIIGVYLFYQST IDNKMIYAFISGFLTLPLMGIHFSSCVYYVILISVLMIAQCIIQGKLVGLKSYGVFLLALIIVGLCGVFALITYSPSHLS QFITGFNSVLNDPLSLFMGQKAMGLERYIKCVGLLPLVCGFIGLCLSFRNREVLFVSAWTLIAFIFSNMHWFGIPVYTFR MLIYLLIPLVILGGYGVSKIYGYLINTNKKQQGVILILLLIILSYGCGYMSIHDDSAKITSASTQIGDYQIAPPTSDEEE VINWFKNEDTQNKSILTNNQFFGTVVSSIDEIPLHYKFDVYTNKSSQKSSLKTFNNEKIGYIIYDKTLVVNNSSDYSNLE VISVNGSYYPSYYFTKEITEKNFDQIKLTNTEKVFENNRFIICKIKS >Mature_527_residues MNINFNKKKYLLIPLILAAILSLSVLFSSKWPLSWDIYTHINYAITYINYGITTVDPYLNAPNGKEIGYVPLFHILLIVI SSITNTSLIDTARIIQTITPVIITSIIVYVTYKMYDEVAAIVAGILLVSSFMFTRLLLPIPETIALIVFIIGVYLFYQST IDNKMIYAFISGFLTLPLMGIHFSSCVYYVILISVLMIAQCIIQGKLVGLKSYGVFLLALIIVGLCGVFALITYSPSHLS QFITGFNSVLNDPLSLFMGQKAMGLERYIKCVGLLPLVCGFIGLCLSFRNREVLFVSAWTLIAFIFSNMHWFGIPVYTFR MLIYLLIPLVILGGYGVSKIYGYLINTNKKQQGVILILLLIILSYGCGYMSIHDDSAKITSASTQIGDYQIAPPTSDEEE VINWFKNEDTQNKSILTNNQFFGTVVSSIDEIPLHYKFDVYTNKSSQKSSLKTFNNEKIGYIIYDKTLVVNNSSDYSNLE VISVNGSYYPSYYFTKEITEKNFDQIKLTNTEKVFENNRFIICKIKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59484; Mature: 59484
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNINFNKKKYLLIPLILAAILSLSVLFSSKWPLSWDIYTHINYAITYINYGITTVDPYLN CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHEEEEEEEECCCEEECCCCC APNGKEIGYVPLFHILLIVISSITNTSLIDTARIIQTITPVIITSIIVYVTYKMYDEVAA CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVAGILLVSSFMFTRLLLPIPETIALIVFIIGVYLFYQSTIDNKMIYAFISGFLTLPLMG HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH IHFSSCVYYVILISVLMIAQCIIQGKLVGLKSYGVFLLALIIVGLCGVFALITYSPSHLS HHHHHHHHHHHHHHHHHHHHHHHHCHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH QFITGFNSVLNDPLSLFMGQKAMGLERYIKCVGLLPLVCGFIGLCLSFRNREVLFVSAWT HHHHHHHHHHCCHHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHH LIAFIFSNMHWFGIPVYTFRMLIYLLIPLVILGGYGVSKIYGYLINTNKKQQGVILILLL HHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHH IILSYGCGYMSIHDDSAKITSASTQIGDYQIAPPTSDEEEVINWFKNEDTQNKSILTNNQ HHHHCCCCEEEEECCCCCEEECCCCCCCEEECCCCCCHHHHHHHHCCCCCCCCCEEECCC FFGTVVSSIDEIPLHYKFDVYTNKSSQKSSLKTFNNEKIGYIIYDKTLVVNNSSDYSNLE HHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHCCCCCEEEEEEEEEEEEECCCCCCCEE VISVNGSYYPSYYFTKEITEKNFDQIKLTNTEKVFENNRFIICKIKS EEEECCCCCCCEEEEHHHHCCCCCEEEECCHHHHHCCCCEEEEEECC >Mature Secondary Structure MNINFNKKKYLLIPLILAAILSLSVLFSSKWPLSWDIYTHINYAITYINYGITTVDPYLN CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHEEEEEEEECCCEEECCCCC APNGKEIGYVPLFHILLIVISSITNTSLIDTARIIQTITPVIITSIIVYVTYKMYDEVAA CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVAGILLVSSFMFTRLLLPIPETIALIVFIIGVYLFYQSTIDNKMIYAFISGFLTLPLMG HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH IHFSSCVYYVILISVLMIAQCIIQGKLVGLKSYGVFLLALIIVGLCGVFALITYSPSHLS HHHHHHHHHHHHHHHHHHHHHHHHCHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH QFITGFNSVLNDPLSLFMGQKAMGLERYIKCVGLLPLVCGFIGLCLSFRNREVLFVSAWT HHHHHHHHHHCCHHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHH LIAFIFSNMHWFGIPVYTFRMLIYLLIPLVILGGYGVSKIYGYLINTNKKQQGVILILLL HHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHH IILSYGCGYMSIHDDSAKITSASTQIGDYQIAPPTSDEEEVINWFKNEDTQNKSILTNNQ HHHHCCCCEEEEECCCCCEEECCCCCCCEEECCCCCCHHHHHHHHCCCCCCCCCEEECCC FFGTVVSSIDEIPLHYKFDVYTNKSSQKSSLKTFNNEKIGYIIYDKTLVVNNSSDYSNLE HHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHCCCCCEEEEEEEEEEEEECCCCCCCEE VISVNGSYYPSYYFTKEITEKNFDQIKLTNTEKVFENNRFIICKIKS EEEECCCCCCCEEEEHHHHCCCCCEEEECCHHHHHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA