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The map label for this gene is 84488988

Identifier: 84488988

GI number: 84488988

Start: 198839

End: 200053

Strand: Direct

Name: 84488988

Synonym: Msp_0159

Alternate gene names: NA

Gene position: 198839-200053 (Clockwise)

Preceding gene: 84488987

Following gene: 84488989

Centisome position: 11.25

GC content: 34.73

Gene sequence:

>1215_bases
ATGAGTGACGTGATTATTGTAGGAGCAGGAACTGGAGGATTAAGTGTAGCAAGAGAATTGTCTAAAAATCCTGACGTGAA
CATCACAATAATAGAAAAAGGACCCAAAACAACACCTGGTGAATCATATAAATTCTATGATCCATGGGATAAAAATGAAC
TAGAATTAATAAAAACCACATGTGTAGGTGGATCATCACTAGTAATAGCAGGAAATTATGTTCCAGCATTAGTTGATGAA
TTAAAAGAATTTGACATAGATATAACACCACAACTAAAACAATTAGAAGAAGAAATACAAATTCAAACAATGCCTAAATC
ACATGAAGGAAAGATAAACAAACTTCTAGCAGATGCTGCAAGGGAATTAGGATTAGAGATGCAACCAATGCCAAAGGGAA
TAAATCCAGAAAAATGTATAATATGTGGAAAATGTGCATGGGGGTGTCCTAATGGTGCAAAATGGAGTAGTTTAGAAGAT
CTTAAGGTAGCACAATCCAATGGGGCAAAATTAATTACAGATGAAGGAGTAATTAATCTCATAGTGGAAGATAATAAAAT
AAAAGGAGTTGTAACTGATAAGGCAAATACATACTATGCAGATGTGGTAGTGCTTGCAGCAGGTGGAATAGTAACTCCAA
AATTACTCAGAATTGCCGGTATAAAAGCAGGAGAAACACTGGCTGTAGATCCATTTGTAACAATAGGTGGATATTATAAA
GGAGCACAACAAGATAATGAAATACAAATGAACAAATTCATAAAACTACCACACATAGTAATAGCTTCACACACAAGTCA
ATTCCTACTACCAAAAATACAAGAAACACATCCTGATGCAACAAGTGATGATATAATAAGTTTCATGGTAAAAGTACCAG
ATAACACCAAAGGATATGTCTATGCAAATGAAGTAGTAAAAGGAATAGACTTTGAAGATGCATCATTAATAGCAAGAGGT
TGTGGAATAGCTGCATCAATTCTTGTAAAAGCTGGGGCAGACATAGAAAGTATCTCTTCAACACATGTAAGGGGAGCACA
CCTAATATCCTCAGCAAGAATAGGAGACATAGTAGATAGTAATCTAGAAACAGAAATAGAAAACTTATATGTTGGAGATG
GATGTGTACTTCCAGAAGCACCAGGACTACCACCAATATATACAATACTAGCACTATCAAGAAGACTTGGACAATACTTA
GCACAAAAATTATGA

Upstream 100 bases:

>100_bases
AGCAGATATACTTCGACAAACACCTATTCAAAAAGCTAAAAATAGAAAGAAAAAAGAAAAACAAAAAGAAGATTATAAAA
AATAAGATAATGGTGATATA

Downstream 100 bases:

>100_bases
TGAGGGAAAATAATGGAATACTTTGTAAGATATGGTGAAATTGGAATTAAAAGTCCTAAAATAAGACATAAATTCGAAAA
AAGATTAATGGATAATATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 403

Protein sequence:

>404_residues
MSDVIIVGAGTGGLSVARELSKNPDVNITIIEKGPKTTPGESYKFYDPWDKNELELIKTTCVGGSSLVIAGNYVPALVDE
LKEFDIDITPQLKQLEEEIQIQTMPKSHEGKINKLLADAARELGLEMQPMPKGINPEKCIICGKCAWGCPNGAKWSSLED
LKVAQSNGAKLITDEGVINLIVEDNKIKGVVTDKANTYYADVVVLAAGGIVTPKLLRIAGIKAGETLAVDPFVTIGGYYK
GAQQDNEIQMNKFIKLPHIVIASHTSQFLLPKIQETHPDATSDDIISFMVKVPDNTKGYVYANEVVKGIDFEDASLIARG
CGIAASILVKAGADIESISSTHVRGAHLISSARIGDIVDSNLETEIENLYVGDGCVLPEAPGLPPIYTILALSRRLGQYL
AQKL

Sequences:

>Translated_404_residues
MSDVIIVGAGTGGLSVARELSKNPDVNITIIEKGPKTTPGESYKFYDPWDKNELELIKTTCVGGSSLVIAGNYVPALVDE
LKEFDIDITPQLKQLEEEIQIQTMPKSHEGKINKLLADAARELGLEMQPMPKGINPEKCIICGKCAWGCPNGAKWSSLED
LKVAQSNGAKLITDEGVINLIVEDNKIKGVVTDKANTYYADVVVLAAGGIVTPKLLRIAGIKAGETLAVDPFVTIGGYYK
GAQQDNEIQMNKFIKLPHIVIASHTSQFLLPKIQETHPDATSDDIISFMVKVPDNTKGYVYANEVVKGIDFEDASLIARG
CGIAASILVKAGADIESISSTHVRGAHLISSARIGDIVDSNLETEIENLYVGDGCVLPEAPGLPPIYTILALSRRLGQYL
AQKL
>Mature_403_residues
SDVIIVGAGTGGLSVARELSKNPDVNITIIEKGPKTTPGESYKFYDPWDKNELELIKTTCVGGSSLVIAGNYVPALVDEL
KEFDIDITPQLKQLEEEIQIQTMPKSHEGKINKLLADAARELGLEMQPMPKGINPEKCIICGKCAWGCPNGAKWSSLEDL
KVAQSNGAKLITDEGVINLIVEDNKIKGVVTDKANTYYADVVVLAAGGIVTPKLLRIAGIKAGETLAVDPFVTIGGYYKG
AQQDNEIQMNKFIKLPHIVIASHTSQFLLPKIQETHPDATSDDIISFMVKVPDNTKGYVYANEVVKGIDFEDASLIARGC
GIAASILVKAGADIESISSTHVRGAHLISSARIGDIVDSNLETEIENLYVGDGCVLPEAPGLPPIYTILALSRRLGQYLA
QKL

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR013027 [H]

Pfam domain/function: PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 43454; Mature: 43323

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVIIVGAGTGGLSVARELSKNPDVNITIIEKGPKTTPGESYKFYDPWDKNELELIKTT
CCCEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEECCCCCCCCEEEEEEE
CVGGSSLVIAGNYVPALVDELKEFDIDITPQLKQLEEEIQIQTMPKSHEGKINKLLADAA
ECCCCEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHEEEECCCCCCCHHHHHHHHHH
RELGLEMQPMPKGINPEKCIICGKCAWGCPNGAKWSSLEDLKVAQSNGAKLITDEGVINL
HHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCEEEE
IVEDNKIKGVVTDKANTYYADVVVLAAGGIVTPKLLRIAGIKAGETLAVDPFVTIGGYYK
EEECCCEEEEEECCCCCEEEEEEEEECCCCCCHHHHHHHCCCCCCEEEECCEEEECCEEC
GAQQDNEIQMNKFIKLPHIVIASHTSQFLLPKIQETHPDATSDDIISFMVKVPDNTKGYV
CCCCCCCEEHHHHCCCCEEEEECCCCHHHCCCHHHCCCCCCHHHHEEEEEECCCCCCCEE
YANEVVKGIDFEDASLIARGCGIAASILVKAGADIESISSTHVRGAHLISSARIGDIVDS
EHHHHHCCCCCCHHHHHHHHCCHHHHHHHHCCCCHHHHCCCCCCHHHHHHHCHHHHHHCC
NLETEIENLYVGDGCVLPEAPGLPPIYTILALSRRLGQYLAQKL
CCHHHHHEEEECCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SDVIIVGAGTGGLSVARELSKNPDVNITIIEKGPKTTPGESYKFYDPWDKNELELIKTT
CCEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEECCCCCCCCEEEEEEE
CVGGSSLVIAGNYVPALVDELKEFDIDITPQLKQLEEEIQIQTMPKSHEGKINKLLADAA
ECCCCEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHEEEECCCCCCCHHHHHHHHHH
RELGLEMQPMPKGINPEKCIICGKCAWGCPNGAKWSSLEDLKVAQSNGAKLITDEGVINL
HHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCEEEE
IVEDNKIKGVVTDKANTYYADVVVLAAGGIVTPKLLRIAGIKAGETLAVDPFVTIGGYYK
EEECCCEEEEEECCCCCEEEEEEEEECCCCCCHHHHHHHCCCCCCEEEECCEEEECCEEC
GAQQDNEIQMNKFIKLPHIVIASHTSQFLLPKIQETHPDATSDDIISFMVKVPDNTKGYV
CCCCCCCEEHHHHCCCCEEEEECCCCHHHCCCHHHCCCCCCHHHHEEEEEECCCCCCCEE
YANEVVKGIDFEDASLIARGCGIAASILVKAGADIESISSTHVRGAHLISSARIGDIVDS
EHHHHHCCCCCCHHHHHHHHCCHHHHHHHHCCCCHHHHCCCCCCHHHHHHHCHHHHHHCC
NLETEIENLYVGDGCVLPEAPGLPPIYTILALSRRLGQYLAQKL
CCHHHHHEEEECCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]