Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is pepP [H]
Identifier: 83721643
GI number: 83721643
Start: 1400223
End: 1402058
Strand: Reverse
Name: pepP [H]
Synonym: BTH_I1254
Alternate gene names: 83721643
Gene position: 1402058-1400223 (Counterclockwise)
Preceding gene: 83720709
Following gene: 83718864
Centisome position: 36.81
GC content: 72.55
Gene sequence:
>1836_bases TTGTCGCCGATCATAACCGGCCGTTGCGCATTCGTTGATAATCGGCCGTCCGGCCTGTGGATGGTTTGCAACAATCGCGC CCGCCCCGTGAGCCGGGCAACGGAGATGAAGCAGCGGTGGCAGCCGCGCGCGGTTTCGCTTCGATCGCGTTCGATCGAAG CGCGTGCGATGGGGTCGTGCGGTTGGCTCGACTTGTGCCGATCGGGCCGCAAGTTCGCCCGGCGCCGTTCATGCCGGCGC ATGCCGGCGGGCGCGGCGCTCGACGAAGCGCACGGCTGCAATCGCGCGCCTCCCCTGCGCGCGCGGCGCATCGTCATGCC GCGGCGCCCCCGAAGCGCGCGCTCGCCGCGCCGCGCCGCGCCGCGCGCGCATGATCGCCGCCCCACCCGCCGCGCGCGCC CCGCGCGACGGCGCTACAATCGCGTGATGAATCAGCCGACCGAACCCGCCATCGCCCTCGACGTCTACCGCCAGCGCCGC GACCGCGTGCTGGCCTCGCTGCGCGCACGAGGCGGCGGCGTCGCGATCGTGCCCACCGCGCCGGAAGTCCCGCGCAATCG CGACAGCGATTATCCGTACCGGCACGACAGCTACTTCTATTACCTGACGGGCTTCGCCGAGCCCGACGCGCTCCTCGTCC TCGACGCGTCGGCGGCAGGCGACGCACCGCGCTCGATCCTGTTCTGCCGCGCGAAGAATCCCGAGCGCGAGATCTGGGAA GGGTTCCATTTCGGCCCCGAAGCCGCGCGCGATGCGTTCGGCTTCGACGCGGCGTTCCCGTACGACGCGCTCGACGCCGA GATGCCGCGCCTCATCGCCGACGCGCCCGCGCTCCACTACCGCTTCGGCGCGTCGGCGGCCTTCGACAGCCGTCTGAACG GCTGGCTCGACGCGGTGCGCGCGCGAGCGCGTGCGGGCGTCGCCGCGCCGGGCGCCGCGTTCGATCTCGGGCCGCTCGTC GACGACATGCGGCTCGTCAAGGACGCGCACGAGCAGGCGACCATGCGCCGCGCGGCCGACATCTCCGCGCTCGCGCACCG CCGCGCGATGGCCGCGTGCCGCCCCGGCATCCGCGAATACGAGCTCGAGGCCGAGCTGCTCTACACGTTCCGCCGCCACG GCGCGCAGTCGCCCGCGTACGGCTCGATCGTCGCGACGGGCGCGAACGCGTGCGTGCTTCACTATCCGGCCGGCAACGCA ATCGTCAACGACGGCGACCTCGTCCTGATCGACGCCGCGTGCGAGCTCGACGGCTACGCCTCCGACATCACCCGCACGTT TCCGGCGAACGGCCGCTTCTCGGGCCCGCAGCGCGCGCTCTACGACATCGTGCTCGCCGCGCAGGAAGCGGCGATCGCGG CGACGCGCGCGGGCACCTCGTTCGACGCGCCGCACGACGCCGCAGTGCGCGTGCTTGCGCAGGGCATGCTCGACACGGGG CTCGTGCCGAAGGCGCGCTTTGCGAGCGTCGACGACGTGATCGCCGAGCGCGCGTACACGCGCTTTTACATGCATCGCAC CGGCCACTGGCTCGGAATGGACGTGCACGACTGCGGCGACTACCGCGAACGCGGCGCGGCGCGCGACGACGACGGCGCGC TGCCGTCGCGCGTGCTGCATGCGGGCATGGCGCTCACGATCGAGCCGGGCCTGTACGTGCGCCCGGCCGACGACGTACCA CAGGCATTCTGGAACGTCGGCATCCGGATCGAGGACGACGCGTTCGTCACGCCGACGGGATGCGAGCTGATCACGCGCGG CGTGCCGGTGGCCGCCGACGAGATCGAGGCGCTGATGCGCGACGCGCAGGCGCCGAGCCCCCGCCCGCAGCCGTGA
Upstream 100 bases:
>100_bases CAGCGAGCACGATCCGCGCCTTGCGGACGAACGGGCTGCTGAGCGAACCGATTAATTTCATCATCTGTCTTCTGTCGGGA ATACCGCCCGAGAGTATACG
Downstream 100 bases:
>100_bases TCCGCGCGCGCTGCTTCCTACCGAGATCCACGATTCAAGAACGATGACGACCGCCGCCTCCACGCCCGCTTTCGACTTCG ACATCGCGATCGTCGGCGCC
Product: Xaa-Pro aminopeptidase
Products: NA
Alternate protein names: Aminoacylproline aminopeptidase; Aminopeptidase P II; APP-II; X-Pro aminopeptidase [H]
Number of amino acids: Translated: 611; Mature: 610
Protein sequence:
>611_residues MSPIITGRCAFVDNRPSGLWMVCNNRARPVSRATEMKQRWQPRAVSLRSRSIEARAMGSCGWLDLCRSGRKFARRRSCRR MPAGAALDEAHGCNRAPPLRARRIVMPRRPRSARSPRRAAPRAHDRRPTRRARPARRRYNRVMNQPTEPAIALDVYRQRR DRVLASLRARGGGVAIVPTAPEVPRNRDSDYPYRHDSYFYYLTGFAEPDALLVLDASAAGDAPRSILFCRAKNPEREIWE GFHFGPEAARDAFGFDAAFPYDALDAEMPRLIADAPALHYRFGASAAFDSRLNGWLDAVRARARAGVAAPGAAFDLGPLV DDMRLVKDAHEQATMRRAADISALAHRRAMAACRPGIREYELEAELLYTFRRHGAQSPAYGSIVATGANACVLHYPAGNA IVNDGDLVLIDAACELDGYASDITRTFPANGRFSGPQRALYDIVLAAQEAAIAATRAGTSFDAPHDAAVRVLAQGMLDTG LVPKARFASVDDVIAERAYTRFYMHRTGHWLGMDVHDCGDYRERGAARDDDGALPSRVLHAGMALTIEPGLYVRPADDVP QAFWNVGIRIEDDAFVTPTGCELITRGVPVAADEIEALMRDAQAPSPRPQP
Sequences:
>Translated_611_residues MSPIITGRCAFVDNRPSGLWMVCNNRARPVSRATEMKQRWQPRAVSLRSRSIEARAMGSCGWLDLCRSGRKFARRRSCRR MPAGAALDEAHGCNRAPPLRARRIVMPRRPRSARSPRRAAPRAHDRRPTRRARPARRRYNRVMNQPTEPAIALDVYRQRR DRVLASLRARGGGVAIVPTAPEVPRNRDSDYPYRHDSYFYYLTGFAEPDALLVLDASAAGDAPRSILFCRAKNPEREIWE GFHFGPEAARDAFGFDAAFPYDALDAEMPRLIADAPALHYRFGASAAFDSRLNGWLDAVRARARAGVAAPGAAFDLGPLV DDMRLVKDAHEQATMRRAADISALAHRRAMAACRPGIREYELEAELLYTFRRHGAQSPAYGSIVATGANACVLHYPAGNA IVNDGDLVLIDAACELDGYASDITRTFPANGRFSGPQRALYDIVLAAQEAAIAATRAGTSFDAPHDAAVRVLAQGMLDTG LVPKARFASVDDVIAERAYTRFYMHRTGHWLGMDVHDCGDYRERGAARDDDGALPSRVLHAGMALTIEPGLYVRPADDVP QAFWNVGIRIEDDAFVTPTGCELITRGVPVAADEIEALMRDAQAPSPRPQP >Mature_610_residues SPIITGRCAFVDNRPSGLWMVCNNRARPVSRATEMKQRWQPRAVSLRSRSIEARAMGSCGWLDLCRSGRKFARRRSCRRM PAGAALDEAHGCNRAPPLRARRIVMPRRPRSARSPRRAAPRAHDRRPTRRARPARRRYNRVMNQPTEPAIALDVYRQRRD RVLASLRARGGGVAIVPTAPEVPRNRDSDYPYRHDSYFYYLTGFAEPDALLVLDASAAGDAPRSILFCRAKNPEREIWEG FHFGPEAARDAFGFDAAFPYDALDAEMPRLIADAPALHYRFGASAAFDSRLNGWLDAVRARARAGVAAPGAAFDLGPLVD DMRLVKDAHEQATMRRAADISALAHRRAMAACRPGIREYELEAELLYTFRRHGAQSPAYGSIVATGANACVLHYPAGNAI VNDGDLVLIDAACELDGYASDITRTFPANGRFSGPQRALYDIVLAAQEAAIAATRAGTSFDAPHDAAVRVLAQGMLDTGL VPKARFASVDDVIAERAYTRFYMHRTGHWLGMDVHDCGDYRERGAARDDDGALPSRVLHAGMALTIEPGLYVRPADDVPQ AFWNVGIRIEDDAFVTPTGCELITRGVPVAADEIEALMRDAQAPSPRPQP
Specific function: Unknown
COG id: COG0006
COG function: function code E; Xaa-Pro aminopeptidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24B family [H]
Homologues:
Organism=Homo sapiens, GI11559925, Length=501, Percent_Identity=29.7405189620758, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI149589008, Length=487, Percent_Identity=29.5687885010267, Blast_Score=179, Evalue=9e-45, Organism=Homo sapiens, GI260593665, Length=310, Percent_Identity=36.1290322580645, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI260593663, Length=496, Percent_Identity=27.0161290322581, Blast_Score=142, Evalue=6e-34, Organism=Escherichia coli, GI1789275, Length=442, Percent_Identity=42.9864253393665, Blast_Score=366, Evalue=1e-102, Organism=Escherichia coli, GI1788728, Length=268, Percent_Identity=32.4626865671642, Blast_Score=114, Evalue=2e-26, Organism=Escherichia coli, GI1790282, Length=297, Percent_Identity=30.3030303030303, Blast_Score=94, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17508215, Length=482, Percent_Identity=30.2904564315353, Blast_Score=192, Evalue=5e-49, Organism=Caenorhabditis elegans, GI71989583, Length=383, Percent_Identity=28.7206266318538, Blast_Score=129, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6320922, Length=422, Percent_Identity=27.2511848341232, Blast_Score=173, Evalue=7e-44, Organism=Saccharomyces cerevisiae, GI6321118, Length=475, Percent_Identity=28.2105263157895, Blast_Score=161, Evalue=4e-40, Organism=Drosophila melanogaster, GI19920384, Length=479, Percent_Identity=33.8204592901879, Blast_Score=224, Evalue=2e-58, Organism=Drosophila melanogaster, GI21357079, Length=497, Percent_Identity=29.9798792756539, Blast_Score=187, Evalue=2e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR007865 - InterPro: IPR001131 [H]
Pfam domain/function: PF05195 AMP_N; PF00557 Peptidase_M24 [H]
EC number: =3.4.11.9 [H]
Molecular weight: Translated: 67333; Mature: 67202
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: PS00491 PROLINE_PEPTIDASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPIITGRCAFVDNRPSGLWMVCNNRARPVSRATEMKQRWQPRAVSLRSRSIEARAMGSC CCCCCCCEEEEECCCCCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHCCHHHHCCCC GWLDLCRSGRKFARRRSCRRMPAGAALDEAHGCNRAPPLRARRIVMPRRPRSARSPRRAA CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCHHEECCCCCCCCCCCCCCCC PRAHDRRPTRRARPARRRYNRVMNQPTEPAIALDVYRQRRDRVLASLRARGGGVAIVPTA CCCCCCCCCHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC PEVPRNRDSDYPYRHDSYFYYLTGFAEPDALLVLDASAAGDAPRSILFCRAKNPEREIWE CCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCEEEEEECCCCHHHHHC GFHFGPEAARDAFGFDAAFPYDALDAEMPRLIADAPALHYRFGASAAFDSRLNGWLDAVR CCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHH ARARAGVAAPGAAFDLGPLVDDMRLVKDAHEQATMRRAADISALAHRRAMAACRPGIREY HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH ELEAELLYTFRRHGAQSPAYGSIVATGANACVLHYPAGNAIVNDGDLVLIDAACELDGYA HHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEECCCCEEECCCCEEEEEECCCCCCCH SDITRTFPANGRFSGPQRALYDIVLAAQEAAIAATRAGTSFDAPHDAAVRVLAQGMLDTG HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC LVPKARFASVDDVIAERAYTRFYMHRTGHWLGMDVHDCGDYRERGAARDDDGALPSRVLH CCCCHHHCCHHHHHHHHHHHHHHHHHCCCEEECCHHHCCCHHHCCCCCCCCCCCHHHHHH AGMALTIEPGLYVRPADDVPQAFWNVGIRIEDDAFVTPTGCELITRGVPVAADEIEALMR CCEEEEECCCEEEECCHHHHHHHHHCCEEECCCCEECCCCHHHHHCCCCCCHHHHHHHHH DAQAPSPRPQP HCCCCCCCCCC >Mature Secondary Structure SPIITGRCAFVDNRPSGLWMVCNNRARPVSRATEMKQRWQPRAVSLRSRSIEARAMGSC CCCCCCEEEEECCCCCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHCCHHHHCCCC GWLDLCRSGRKFARRRSCRRMPAGAALDEAHGCNRAPPLRARRIVMPRRPRSARSPRRAA CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCHHEECCCCCCCCCCCCCCCC PRAHDRRPTRRARPARRRYNRVMNQPTEPAIALDVYRQRRDRVLASLRARGGGVAIVPTA CCCCCCCCCHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC PEVPRNRDSDYPYRHDSYFYYLTGFAEPDALLVLDASAAGDAPRSILFCRAKNPEREIWE CCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCEEEEEECCCCHHHHHC GFHFGPEAARDAFGFDAAFPYDALDAEMPRLIADAPALHYRFGASAAFDSRLNGWLDAVR CCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHH ARARAGVAAPGAAFDLGPLVDDMRLVKDAHEQATMRRAADISALAHRRAMAACRPGIREY HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH ELEAELLYTFRRHGAQSPAYGSIVATGANACVLHYPAGNAIVNDGDLVLIDAACELDGYA HHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEECCCCEEECCCCEEEEEECCCCCCCH SDITRTFPANGRFSGPQRALYDIVLAAQEAAIAATRAGTSFDAPHDAAVRVLAQGMLDTG HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC LVPKARFASVDDVIAERAYTRFYMHRTGHWLGMDVHDCGDYRERGAARDDDGALPSRVLH CCCCHHHCCHHHHHHHHHHHHHHHHHCCCEEECCHHHCCCHHHCCCCCCCCCCCHHHHHH AGMALTIEPGLYVRPADDVPQAFWNVGIRIEDDAFVTPTGCELITRGVPVAADEIEALMR CCEEEEECCCEEEECCHHHHHHHHHCCEEECCCCEECCCCHHHHHCCCCCCHHHHHHHHH DAQAPSPRPQP HCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2659585; 1339425; 9278503; 9520390 [H]