Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is metI [H]
Identifier: 83721257
GI number: 83721257
Start: 1860908
End: 1861561
Strand: Direct
Name: metI [H]
Synonym: BTH_I1651
Alternate gene names: 83721257
Gene position: 1860908-1861561 (Clockwise)
Preceding gene: 83719169
Following gene: 83720648
Centisome position: 48.85
GC content: 67.58
Gene sequence:
>654_bases ATGTTGAGTGAAATGTTCGATATGTTCGTGCAGTCGTTCTGGGAGACGCTGATCATGGTCGGCATCTCCGGAGCGGTCGG CGCGCTCGTCGGCCTGCCGCTCGGCGTGCTGCTCTATCTGACCGACCGCCAGGGCGTGCTGCAGAACCTCGCGGTGAACC GCGTGCTGGGCGGCGTCGTCAACGCGGTGCGCTCGACGCCGTTCATCATCCTGCTCGTCGCGGTGATTCCGTTCACGCGT CTGGCCGTCGGCTCGTCGATCGGCACGGCCGCGGCCGTGGTGCCGCTCACGATCGCGGCGGCGCCGTTCATCGCGCGGCT CGTCGAGACGGCGCTGCGCGAAGTCGACCGCGGCCTCATCGAGGCCGCGCAGGCGATGGGCGCGACGACGGGCCAGATCG TGTTCAAGGTGCTGCTGCCCGAATCGCTGCCGGGCATCGTCGCGGGGCTCACGATCACGTTCGTGTCGCTCGTCGGCTAT TCGGCGATGGCGGGCGCGATCGGCGGCGGCGGCCTGGGCGACCTCGGCATCCGCTACGGCTATCAGCGCTATTTGCCCGA AGTAATGTGGACGGTCGTCGCGATCCTGATCGTGTTCGTGCAGATCGTGCAGTCGTTCGGCGACTGGCTCGTGCGGCGCC TGAGCCACAAGTGA
Upstream 100 bases:
>100_bases TTCGGTTCGCTCGCGGTGCTCGCCACGGGCGAGCCGGGCAAGGTGGGGCAGGCGTTCGCGTATCTGCGCGAGCAGGGCGT GGTCGTCGAGGAGCTTTCGT
Downstream 100 bases:
>100_bases CGCAATCGACAATCGAAGACGAACGAGCGCCGCGCGTCTCGACATGCGACGGCGCCACAACCGCAGAGGAGATCCGAAGA TGCAACGAAGAACGATGCTG
Product: D-methionine ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MLSEMFDMFVQSFWETLIMVGISGAVGALVGLPLGVLLYLTDRQGVLQNLAVNRVLGGVVNAVRSTPFIILLVAVIPFTR LAVGSSIGTAAAVVPLTIAAAPFIARLVETALREVDRGLIEAAQAMGATTGQIVFKVLLPESLPGIVAGLTITFVSLVGY SAMAGAIGGGGLGDLGIRYGYQRYLPEVMWTVVAILIVFVQIVQSFGDWLVRRLSHK
Sequences:
>Translated_217_residues MLSEMFDMFVQSFWETLIMVGISGAVGALVGLPLGVLLYLTDRQGVLQNLAVNRVLGGVVNAVRSTPFIILLVAVIPFTR LAVGSSIGTAAAVVPLTIAAAPFIARLVETALREVDRGLIEAAQAMGATTGQIVFKVLLPESLPGIVAGLTITFVSLVGY SAMAGAIGGGGLGDLGIRYGYQRYLPEVMWTVVAILIVFVQIVQSFGDWLVRRLSHK >Mature_217_residues MLSEMFDMFVQSFWETLIMVGISGAVGALVGLPLGVLLYLTDRQGVLQNLAVNRVLGGVVNAVRSTPFIILLVAVIPFTR LAVGSSIGTAAAVVPLTIAAAPFIARLVETALREVDRGLIEAAQAMGATTGQIVFKVLLPESLPGIVAGLTITFVSLVGY SAMAGAIGGGGLGDLGIRYGYQRYLPEVMWTVVAILIVFVQIVQSFGDWLVRRLSHK
Specific function: Part of the binding-protein-dependent transport system for D-methionine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG2011
COG function: function code P; ABC-type metal ion transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786397, Length=217, Percent_Identity=54.3778801843318, Blast_Score=186, Evalue=1e-48, Organism=Escherichia coli, GI1789033, Length=150, Percent_Identity=32, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 22930; Mature: 22930
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSEMFDMFVQSFWETLIMVGISGAVGALVGLPLGVLLYLTDRQGVLQNLAVNRVLGGVV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH NAVRSTPFIILLVAVIPFTRLAVGSSIGTAAAVVPLTIAAAPFIARLVETALREVDRGLI HHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAAQAMGATTGQIVFKVLLPESLPGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG HHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH YQRYLPEVMWTVVAILIVFVQIVQSFGDWLVRRLSHK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLSEMFDMFVQSFWETLIMVGISGAVGALVGLPLGVLLYLTDRQGVLQNLAVNRVLGGVV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH NAVRSTPFIILLVAVIPFTRLAVGSSIGTAAAVVPLTIAAAPFIARLVETALREVDRGLI HHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAAQAMGATTGQIVFKVLLPESLPGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG HHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH YQRYLPEVMWTVVAILIVFVQIVQSFGDWLVRRLSHK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]