Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is metQ [H]
Identifier: 83720648
GI number: 83720648
Start: 1861641
End: 1862441
Strand: Direct
Name: metQ [H]
Synonym: BTH_I1652
Alternate gene names: 83720648
Gene position: 1861641-1862441 (Clockwise)
Preceding gene: 83721257
Following gene: 83721332
Centisome position: 48.87
GC content: 66.92
Gene sequence:
>801_bases ATGCAACGAAGAACGATGCTGAAGCTCGCCGCCGTGCTCGGCGCGGCCGCGTGCGTCGCGAGCGCGCACGCGCAGGCGCA GGCGCAGACGATCAAGGTCGGCGTGACGGGCGGCCCGCATGCGCAGGTGATGGAGGAAGTGAAGAAGGTCGCGGCGAAGA GCGGGCTCGACATCCGCATCGTCGAATTCTCCGACTACGTGCAGCCGAACGCGGCGCTCGCGGCGGGCGACCTCGACGCG AACAGCTACCAGCATGGCCCGTATCTCGAAGCGCAGGTGAAGGATCGCGGCTACAAGATCGTCAAGGTCGCGGATACGGT CACGTTCCCGATGGGCATCTATTCGAAGCGCGTGAAGTCGCTTGCGGATTTGCGGCCGGGGGCGCGGATTGCGATCCCGA ACGATCCGACGAACGGCGGCCGCGCGCTGTTGCTGCTGCAGAAGCAGGGCCTGCTGAAGCTGCGCGACGGCGCGGGCCTG AAGGCGACGCGCTTCGACGTCGTCGACAACCCGAAGCAGTTGAAGCTCGTCGAGCTCGATGCCGCGCAGATCCCGCGCTC GCTCGCCGACGTCGACGCGGCCGCGATCAACACGAACTACGCGATGGAAGCCGGCCTGAAGCCGAAACAGGACGCGATCG CAATCGAGGGTCCGAACGGTCCGTACGCGAACATTCTCGCGGTGCGCGCCGAGGACAAGGACAAGCCGTGGGTCGCGAAG CTCGTTGCCGCATACCGGTCGCCCGAGGTGAAGCGCTTCATCGCGCGCCAATTCGGCGGCGCGGTGATCGCCGCCTGGTA G
Upstream 100 bases:
>100_bases CGGCGCCTGAGCCACAAGTGACGCAATCGACAATCGAAGACGAACGAGCGCCGCGCGTCTCGACATGCGACGGCGCCACA ACCGCAGAGGAGATCCGAAG
Downstream 100 bases:
>100_bases GGCGAACAAGAGGGCGCGCCGCTGATTAGAGGTGGAGATCGAAAGCCCGGGCTTGGCGTCCGGGTTTTTTCTCTTTTAAA ATAGAACGACCGTTCGCTAT
Product: D-methionine ABC transporter periplasmic D-methionine-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MQRRTMLKLAAVLGAAACVASAHAQAQAQTIKVGVTGGPHAQVMEEVKKVAAKSGLDIRIVEFSDYVQPNAALAAGDLDA NSYQHGPYLEAQVKDRGYKIVKVADTVTFPMGIYSKRVKSLADLRPGARIAIPNDPTNGGRALLLLQKQGLLKLRDGAGL KATRFDVVDNPKQLKLVELDAAQIPRSLADVDAAAINTNYAMEAGLKPKQDAIAIEGPNGPYANILAVRAEDKDKPWVAK LVAAYRSPEVKRFIARQFGGAVIAAW
Sequences:
>Translated_266_residues MQRRTMLKLAAVLGAAACVASAHAQAQAQTIKVGVTGGPHAQVMEEVKKVAAKSGLDIRIVEFSDYVQPNAALAAGDLDA NSYQHGPYLEAQVKDRGYKIVKVADTVTFPMGIYSKRVKSLADLRPGARIAIPNDPTNGGRALLLLQKQGLLKLRDGAGL KATRFDVVDNPKQLKLVELDAAQIPRSLADVDAAAINTNYAMEAGLKPKQDAIAIEGPNGPYANILAVRAEDKDKPWVAK LVAAYRSPEVKRFIARQFGGAVIAAW >Mature_266_residues MQRRTMLKLAAVLGAAACVASAHAQAQAQTIKVGVTGGPHAQVMEEVKKVAAKSGLDIRIVEFSDYVQPNAALAAGDLDA NSYQHGPYLEAQVKDRGYKIVKVADTVTFPMGIYSKRVKSLADLRPGARIAIPNDPTNGGRALLLLQKQGLLKLRDGAGL KATRFDVVDNPKQLKLVELDAAQIPRSLADVDAAAINTNYAMEAGLKPKQDAIAIEGPNGPYANILAVRAEDKDKPWVAK LVAAYRSPEVKRFIARQFGGAVIAAW
Specific function: This protein is a component of a D-methionine permease, a binding protein-dependent, ATP-driven transport system [H]
COG id: COG1464
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nlpA lipoprotein family [H]
Homologues:
Organism=Escherichia coli, GI1786396, Length=269, Percent_Identity=48.3271375464684, Blast_Score=259, Evalue=1e-70, Organism=Escherichia coli, GI1790093, Length=246, Percent_Identity=46.3414634146341, Blast_Score=226, Evalue=9e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004872 - InterPro: IPR004478 [H]
Pfam domain/function: PF03180 Lipoprotein_9 [H]
EC number: NA
Molecular weight: Translated: 28432; Mature: 28432
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRRTMLKLAAVLGAAACVASAHAQAQAQTIKVGVTGGPHAQVMEEVKKVAAKSGLDIRI CCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEE VEFSDYVQPNAALAAGDLDANSYQHGPYLEAQVKDRGYKIVKVADTVTFPMGIYSKRVKS EEECCCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEECEEECCHHHHHHHHHH LADLRPGARIAIPNDPTNGGRALLLLQKQGLLKLRDGAGLKATRFDVVDNPKQLKLVELD HHHCCCCCEEECCCCCCCCCEEEEEEECCCCEEEECCCCCEEEEEEECCCCCEEEEEECC AAQIPRSLADVDAAAINTNYAMEAGLKPKQDAIAIEGPNGPYANILAVRAEDKDKPWVAK HHHCCHHHHHHHHHHCCCCCCEECCCCCCCCEEEEECCCCCCEEEEEEEECCCCCHHHHH LVAAYRSPEVKRFIARQFGGAVIAAW HHHHHCCHHHHHHHHHHHCCEEEEEC >Mature Secondary Structure MQRRTMLKLAAVLGAAACVASAHAQAQAQTIKVGVTGGPHAQVMEEVKKVAAKSGLDIRI CCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEE VEFSDYVQPNAALAAGDLDANSYQHGPYLEAQVKDRGYKIVKVADTVTFPMGIYSKRVKS EEECCCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEECEEECCHHHHHHHHHH LADLRPGARIAIPNDPTNGGRALLLLQKQGLLKLRDGAGLKATRFDVVDNPKQLKLVELD HHHCCCCCEEECCCCCCCCCEEEEEEECCCCEEEECCCCCEEEEEEECCCCCEEEEEECC AAQIPRSLADVDAAAINTNYAMEAGLKPKQDAIAIEGPNGPYANILAVRAEDKDKPWVAK HHHCCHHHHHHHHHHCCCCCCEECCCCCCCCEEEEECCCCCCEEEEEEEECCCCCHHHHH LVAAYRSPEVKRFIARQFGGAVIAAW HHHHHCCHHHHHHHHHHHCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]