Definition Burkholderia thailandensis E264 chromosome chromosome I, complete sequence.
Accession NC_007651
Length 3,809,201

Click here to switch to the map view.

The map label for this gene is metQ [H]

Identifier: 83720648

GI number: 83720648

Start: 1861641

End: 1862441

Strand: Direct

Name: metQ [H]

Synonym: BTH_I1652

Alternate gene names: 83720648

Gene position: 1861641-1862441 (Clockwise)

Preceding gene: 83721257

Following gene: 83721332

Centisome position: 48.87

GC content: 66.92

Gene sequence:

>801_bases
ATGCAACGAAGAACGATGCTGAAGCTCGCCGCCGTGCTCGGCGCGGCCGCGTGCGTCGCGAGCGCGCACGCGCAGGCGCA
GGCGCAGACGATCAAGGTCGGCGTGACGGGCGGCCCGCATGCGCAGGTGATGGAGGAAGTGAAGAAGGTCGCGGCGAAGA
GCGGGCTCGACATCCGCATCGTCGAATTCTCCGACTACGTGCAGCCGAACGCGGCGCTCGCGGCGGGCGACCTCGACGCG
AACAGCTACCAGCATGGCCCGTATCTCGAAGCGCAGGTGAAGGATCGCGGCTACAAGATCGTCAAGGTCGCGGATACGGT
CACGTTCCCGATGGGCATCTATTCGAAGCGCGTGAAGTCGCTTGCGGATTTGCGGCCGGGGGCGCGGATTGCGATCCCGA
ACGATCCGACGAACGGCGGCCGCGCGCTGTTGCTGCTGCAGAAGCAGGGCCTGCTGAAGCTGCGCGACGGCGCGGGCCTG
AAGGCGACGCGCTTCGACGTCGTCGACAACCCGAAGCAGTTGAAGCTCGTCGAGCTCGATGCCGCGCAGATCCCGCGCTC
GCTCGCCGACGTCGACGCGGCCGCGATCAACACGAACTACGCGATGGAAGCCGGCCTGAAGCCGAAACAGGACGCGATCG
CAATCGAGGGTCCGAACGGTCCGTACGCGAACATTCTCGCGGTGCGCGCCGAGGACAAGGACAAGCCGTGGGTCGCGAAG
CTCGTTGCCGCATACCGGTCGCCCGAGGTGAAGCGCTTCATCGCGCGCCAATTCGGCGGCGCGGTGATCGCCGCCTGGTA
G

Upstream 100 bases:

>100_bases
CGGCGCCTGAGCCACAAGTGACGCAATCGACAATCGAAGACGAACGAGCGCCGCGCGTCTCGACATGCGACGGCGCCACA
ACCGCAGAGGAGATCCGAAG

Downstream 100 bases:

>100_bases
GGCGAACAAGAGGGCGCGCCGCTGATTAGAGGTGGAGATCGAAAGCCCGGGCTTGGCGTCCGGGTTTTTTCTCTTTTAAA
ATAGAACGACCGTTCGCTAT

Product: D-methionine ABC transporter periplasmic D-methionine-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MQRRTMLKLAAVLGAAACVASAHAQAQAQTIKVGVTGGPHAQVMEEVKKVAAKSGLDIRIVEFSDYVQPNAALAAGDLDA
NSYQHGPYLEAQVKDRGYKIVKVADTVTFPMGIYSKRVKSLADLRPGARIAIPNDPTNGGRALLLLQKQGLLKLRDGAGL
KATRFDVVDNPKQLKLVELDAAQIPRSLADVDAAAINTNYAMEAGLKPKQDAIAIEGPNGPYANILAVRAEDKDKPWVAK
LVAAYRSPEVKRFIARQFGGAVIAAW

Sequences:

>Translated_266_residues
MQRRTMLKLAAVLGAAACVASAHAQAQAQTIKVGVTGGPHAQVMEEVKKVAAKSGLDIRIVEFSDYVQPNAALAAGDLDA
NSYQHGPYLEAQVKDRGYKIVKVADTVTFPMGIYSKRVKSLADLRPGARIAIPNDPTNGGRALLLLQKQGLLKLRDGAGL
KATRFDVVDNPKQLKLVELDAAQIPRSLADVDAAAINTNYAMEAGLKPKQDAIAIEGPNGPYANILAVRAEDKDKPWVAK
LVAAYRSPEVKRFIARQFGGAVIAAW
>Mature_266_residues
MQRRTMLKLAAVLGAAACVASAHAQAQAQTIKVGVTGGPHAQVMEEVKKVAAKSGLDIRIVEFSDYVQPNAALAAGDLDA
NSYQHGPYLEAQVKDRGYKIVKVADTVTFPMGIYSKRVKSLADLRPGARIAIPNDPTNGGRALLLLQKQGLLKLRDGAGL
KATRFDVVDNPKQLKLVELDAAQIPRSLADVDAAAINTNYAMEAGLKPKQDAIAIEGPNGPYANILAVRAEDKDKPWVAK
LVAAYRSPEVKRFIARQFGGAVIAAW

Specific function: This protein is a component of a D-methionine permease, a binding protein-dependent, ATP-driven transport system [H]

COG id: COG1464

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpA lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1786396, Length=269, Percent_Identity=48.3271375464684, Blast_Score=259, Evalue=1e-70,
Organism=Escherichia coli, GI1790093, Length=246, Percent_Identity=46.3414634146341, Blast_Score=226, Evalue=9e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004872
- InterPro:   IPR004478 [H]

Pfam domain/function: PF03180 Lipoprotein_9 [H]

EC number: NA

Molecular weight: Translated: 28432; Mature: 28432

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRRTMLKLAAVLGAAACVASAHAQAQAQTIKVGVTGGPHAQVMEEVKKVAAKSGLDIRI
CCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEE
VEFSDYVQPNAALAAGDLDANSYQHGPYLEAQVKDRGYKIVKVADTVTFPMGIYSKRVKS
EEECCCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEECEEECCHHHHHHHHHH
LADLRPGARIAIPNDPTNGGRALLLLQKQGLLKLRDGAGLKATRFDVVDNPKQLKLVELD
HHHCCCCCEEECCCCCCCCCEEEEEEECCCCEEEECCCCCEEEEEEECCCCCEEEEEECC
AAQIPRSLADVDAAAINTNYAMEAGLKPKQDAIAIEGPNGPYANILAVRAEDKDKPWVAK
HHHCCHHHHHHHHHHCCCCCCEECCCCCCCCEEEEECCCCCCEEEEEEEECCCCCHHHHH
LVAAYRSPEVKRFIARQFGGAVIAAW
HHHHHCCHHHHHHHHHHHCCEEEEEC
>Mature Secondary Structure
MQRRTMLKLAAVLGAAACVASAHAQAQAQTIKVGVTGGPHAQVMEEVKKVAAKSGLDIRI
CCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEE
VEFSDYVQPNAALAAGDLDANSYQHGPYLEAQVKDRGYKIVKVADTVTFPMGIYSKRVKS
EEECCCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEECEEECCHHHHHHHHHH
LADLRPGARIAIPNDPTNGGRALLLLQKQGLLKLRDGAGLKATRFDVVDNPKQLKLVELD
HHHCCCCCEEECCCCCCCCCEEEEEEECCCCEEEECCCCCEEEEEEECCCCCEEEEEECC
AAQIPRSLADVDAAAINTNYAMEAGLKPKQDAIAIEGPNGPYANILAVRAEDKDKPWVAK
HHHCCHHHHHHHHHHCCCCCCEECCCCCCCCEEEEECCCCCCEEEEEEEECCCCCHHHHH
LVAAYRSPEVKRFIARQFGGAVIAAW
HHHHHCCHHHHHHHHHHHCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]