| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is yheS [H]
Identifier: 83721224
GI number: 83721224
Start: 2274699
End: 2276639
Strand: Reverse
Name: yheS [H]
Synonym: BTH_I2010
Alternate gene names: 83721224
Gene position: 2276639-2274699 (Counterclockwise)
Preceding gene: 83719812
Following gene: 83719089
Centisome position: 59.77
GC content: 68.01
Gene sequence:
>1941_bases GTGATCCGTTTCAATCAGTTCAGTCTCGCCCGCGGCACGAAGCCGCTCTTCGACGCGACCTCGTTCACGCTGAATCCCGG CGAGAAGGCGGGCCTCGTCGGCGCGAACGGCGCCGGCAAATCGACGCTCTTCGCAGTGCTGCGCGGCGAGCTGCACGCGG ACGCGGGCGACTTCTCGATGCCGCCGGCGTGGCACATCGCGCACGTGTCGCAGGAGACGCCCGCCGTCGATCGCAGCGCG CTCGACTACACGCTCGACGGCGACGCCGCATTGCGCGCGATCGAGGCGCGCATCGCGCAGGCGTCCGCCGCGCACGACGG CGCGGCCGAGGCCGATGCGCATGCGGCGTTCGCGGATGCCGACGGCTACACCGCGCCCGCGCGCGCCGAGGCGCTGCTGC TCGGGCTCGGCTTCACGCTCGCGCAGACACGCGAGCCCGTCGCGAGCTTCTCGGGCGGCTGGCGAATGCGCCTGAATCTC GCGCAGGCGCTGATGTGCCGCTCGGATCTGCTGCTCCTCGACGAGCCGACGAACCACCTGGATCTCGACGCGATCGTCTG GCTCGAAGACTGGCTGCATCGCTACCCCGGCACGCTCGTCATCATTTCGCACGATCGCGAATTCCTCGACGCCGTCTGCA ACGTGACGCTGCACCTCGAGAACCGTCAGGTGAAGCGCTACGGCGGCAACTACTCGCAATTCGAAGTGTTGCGCGCGCAG CAGCTCGAATTGCAGCAAAGCGCGTACGAGAAGCAGCGAAAGACGATCGCGCATCTGCAGAGCTTCGTCGATCGGTTCAA GGCGAAGGCGTCGAAGGCGAAGCAGGCGCAAAGCCGGGTGAAGGCGCTCGAGAAGATGGAGCTGATCGCGCCCGCGCACG TCGCGTCGCCGTTCACGTTCGAATTCCGCACGCCCGATTCCGCGCCGAATCCGATGCTCGTGATGGAAGACGTGCGCTGC GGCTATCACGCGGACGGCGGCGGCGAGATTCCGATCGTCGAGCGCGTCGCGCTGTCGATCCAGAACGGCCAGCGCATCGG CCTCCTCGGCGCGAACGGCCAGGGCAAGTCGACGCTCATCAAGACGCTCGCGGGCACGCTCGCGCCGCTTTCGGGCGACG TGCGCACCGGCCGCGGCCTCACGATCGGCTATTTCGCGCAGCATCAGCTCGAGACGCTGCGCGAGGACGAATCGGCGCTC GCGCATCTCGCGCGCCTTGCCCCCGACACGCGCGAGCAGGAACTGCGCGACTTCCTCGGCGGCTTCAACTTCTCGGGCGA CATGGCGACCGCGCCGATCGCGCCGTTCTCGGGCGGTGAGAAAGCGCGGCTCGCGCTCGCGCTGATCATCTGGCAAAAAC CGAACCTGCTGCTGCTCGACGAGCCGACGAACCACCTCGATCTCGAAACTCGCCACGCACTCACGATGGCGCTCGCGCAG TTCGAGGGCACGCTGATCCTCGTGTCGCACGATCGCCACCTGCTGCGCGCGACGACCGACCAGTTCATGCTCGTCGCGAA GCACCGGCTGCAGCCGTTCGACGGCGATCTCGACGACTACCGCGACTGGCTGCTGCAGCACGCGGCGGAACAGCGCGCGG CGGCGAAGGCCGCATCGGGCTCGGCGAGCGACGCCGACGGCGGCGCGCCCGCGGTGAACCGCAAGGATCAGAAACGGCAG GAAGCCGAAGCGCGTCAGCGGCTGTCGCTGTTGAAGAAGCCGCTGCAGGCACGCATCACGAAAATCGAGAAGGAAATGGA GCGGCTCCACGCGCAGAAGGTGGAGCTCGACGCGTTCGTCGCCGATCCGGCCAGCTACGCGGCCGACCAGAAGGCGCGGC TCACCGAAGCGATCCGCAAGCTCGGCGACGTGAACGGCCGGCTCGAAACGCTCGAGGCGGACTGGCTCGGCGCGCAGGAC GAACTGGAGAGTATCGGGTAA
Upstream 100 bases:
>100_bases TCTAGGCGAATTCGGCGCGGCGCGCATGCTCCGCCGTCCGGACGATCCCGCGGATGCGGCGCGCAGTCTAGAATAGCGAT TTTCTCCAGCATTTCTCGCC
Downstream 100 bases:
>100_bases CGCAAGCGGCGCGCGGGTATCGGGTATCGGGTATCGCCCATCGCCCGCGCCGCGCTCCGGGCGATGCAGCTCGGGATCAC CTCCGCGGCAGCGTGTCGCG
Product: ABC transporter ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 646; Mature: 646
Protein sequence:
>646_residues MIRFNQFSLARGTKPLFDATSFTLNPGEKAGLVGANGAGKSTLFAVLRGELHADAGDFSMPPAWHIAHVSQETPAVDRSA LDYTLDGDAALRAIEARIAQASAAHDGAAEADAHAAFADADGYTAPARAEALLLGLGFTLAQTREPVASFSGGWRMRLNL AQALMCRSDLLLLDEPTNHLDLDAIVWLEDWLHRYPGTLVIISHDREFLDAVCNVTLHLENRQVKRYGGNYSQFEVLRAQ QLELQQSAYEKQRKTIAHLQSFVDRFKAKASKAKQAQSRVKALEKMELIAPAHVASPFTFEFRTPDSAPNPMLVMEDVRC GYHADGGGEIPIVERVALSIQNGQRIGLLGANGQGKSTLIKTLAGTLAPLSGDVRTGRGLTIGYFAQHQLETLREDESAL AHLARLAPDTREQELRDFLGGFNFSGDMATAPIAPFSGGEKARLALALIIWQKPNLLLLDEPTNHLDLETRHALTMALAQ FEGTLILVSHDRHLLRATTDQFMLVAKHRLQPFDGDLDDYRDWLLQHAAEQRAAAKAASGSASDADGGAPAVNRKDQKRQ EAEARQRLSLLKKPLQARITKIEKEMERLHAQKVELDAFVADPASYAADQKARLTEAIRKLGDVNGRLETLEADWLGAQD ELESIG
Sequences:
>Translated_646_residues MIRFNQFSLARGTKPLFDATSFTLNPGEKAGLVGANGAGKSTLFAVLRGELHADAGDFSMPPAWHIAHVSQETPAVDRSA LDYTLDGDAALRAIEARIAQASAAHDGAAEADAHAAFADADGYTAPARAEALLLGLGFTLAQTREPVASFSGGWRMRLNL AQALMCRSDLLLLDEPTNHLDLDAIVWLEDWLHRYPGTLVIISHDREFLDAVCNVTLHLENRQVKRYGGNYSQFEVLRAQ QLELQQSAYEKQRKTIAHLQSFVDRFKAKASKAKQAQSRVKALEKMELIAPAHVASPFTFEFRTPDSAPNPMLVMEDVRC GYHADGGGEIPIVERVALSIQNGQRIGLLGANGQGKSTLIKTLAGTLAPLSGDVRTGRGLTIGYFAQHQLETLREDESAL AHLARLAPDTREQELRDFLGGFNFSGDMATAPIAPFSGGEKARLALALIIWQKPNLLLLDEPTNHLDLETRHALTMALAQ FEGTLILVSHDRHLLRATTDQFMLVAKHRLQPFDGDLDDYRDWLLQHAAEQRAAAKAASGSASDADGGAPAVNRKDQKRQ EAEARQRLSLLKKPLQARITKIEKEMERLHAQKVELDAFVADPASYAADQKARLTEAIRKLGDVNGRLETLEADWLGAQD ELESIG >Mature_646_residues MIRFNQFSLARGTKPLFDATSFTLNPGEKAGLVGANGAGKSTLFAVLRGELHADAGDFSMPPAWHIAHVSQETPAVDRSA LDYTLDGDAALRAIEARIAQASAAHDGAAEADAHAAFADADGYTAPARAEALLLGLGFTLAQTREPVASFSGGWRMRLNL AQALMCRSDLLLLDEPTNHLDLDAIVWLEDWLHRYPGTLVIISHDREFLDAVCNVTLHLENRQVKRYGGNYSQFEVLRAQ QLELQQSAYEKQRKTIAHLQSFVDRFKAKASKAKQAQSRVKALEKMELIAPAHVASPFTFEFRTPDSAPNPMLVMEDVRC GYHADGGGEIPIVERVALSIQNGQRIGLLGANGQGKSTLIKTLAGTLAPLSGDVRTGRGLTIGYFAQHQLETLREDESAL AHLARLAPDTREQELRDFLGGFNFSGDMATAPIAPFSGGEKARLALALIIWQKPNLLLLDEPTNHLDLETRHALTMALAQ FEGTLILVSHDRHLLRATTDQFMLVAKHRLQPFDGDLDDYRDWLLQHAAEQRAAAKAASGSASDADGGAPAVNRKDQKRQ EAEARQRLSLLKKPLQARITKIEKEMERLHAQKVELDAFVADPASYAADQKARLTEAIRKLGDVNGRLETLEADWLGAQD ELESIG
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI148612853, Length=534, Percent_Identity=38.9513108614232, Blast_Score=357, Evalue=2e-98, Organism=Homo sapiens, GI27881506, Length=530, Percent_Identity=36.4150943396226, Blast_Score=327, Evalue=2e-89, Organism=Homo sapiens, GI10947137, Length=530, Percent_Identity=36.4150943396226, Blast_Score=327, Evalue=3e-89, Organism=Homo sapiens, GI10947135, Length=545, Percent_Identity=33.9449541284404, Blast_Score=259, Evalue=8e-69, Organism=Homo sapiens, GI69354671, Length=545, Percent_Identity=33.9449541284404, Blast_Score=258, Evalue=8e-69, Organism=Homo sapiens, GI153792144, Length=231, Percent_Identity=27.2727272727273, Blast_Score=68, Evalue=3e-11, Organism=Escherichia coli, GI1789751, Length=645, Percent_Identity=53.6434108527132, Blast_Score=702, Evalue=0.0, Organism=Escherichia coli, GI1787041, Length=529, Percent_Identity=36.8620037807183, Blast_Score=341, Evalue=8e-95, Organism=Escherichia coli, GI1787182, Length=545, Percent_Identity=29.9082568807339, Blast_Score=212, Evalue=6e-56, Organism=Escherichia coli, GI2367384, Length=530, Percent_Identity=30.188679245283, Blast_Score=211, Evalue=1e-55, Organism=Escherichia coli, GI87081782, Length=529, Percent_Identity=24.952741020794, Blast_Score=94, Evalue=3e-20, Organism=Escherichia coli, GI1788165, Length=188, Percent_Identity=32.9787234042553, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI1787164, Length=199, Percent_Identity=32.1608040201005, Blast_Score=69, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17553372, Length=532, Percent_Identity=36.2781954887218, Blast_Score=338, Evalue=6e-93, Organism=Caenorhabditis elegans, GI17555318, Length=513, Percent_Identity=35.672514619883, Blast_Score=322, Evalue=3e-88, Organism=Caenorhabditis elegans, GI17559834, Length=564, Percent_Identity=32.4468085106383, Blast_Score=298, Evalue=4e-81, Organism=Saccharomyces cerevisiae, GI6321121, Length=556, Percent_Identity=34.8920863309352, Blast_Score=330, Evalue=5e-91, Organism=Saccharomyces cerevisiae, GI6320874, Length=537, Percent_Identity=32.7746741154562, Blast_Score=291, Evalue=3e-79, Organism=Saccharomyces cerevisiae, GI6324314, Length=386, Percent_Identity=30.8290155440415, Blast_Score=160, Evalue=5e-40, Organism=Saccharomyces cerevisiae, GI6325030, Length=397, Percent_Identity=30.7304785894207, Blast_Score=156, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6323278, Length=385, Percent_Identity=29.0909090909091, Blast_Score=149, Evalue=1e-36, Organism=Drosophila melanogaster, GI24666836, Length=528, Percent_Identity=38.4469696969697, Blast_Score=375, Evalue=1e-104, Organism=Drosophila melanogaster, GI24642252, Length=548, Percent_Identity=37.5912408759124, Blast_Score=346, Evalue=3e-95, Organism=Drosophila melanogaster, GI18859989, Length=548, Percent_Identity=37.5912408759124, Blast_Score=346, Evalue=3e-95, Organism=Drosophila melanogaster, GI24641342, Length=548, Percent_Identity=34.8540145985401, Blast_Score=309, Evalue=4e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 70736; Mature: 70736
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRFNQFSLARGTKPLFDATSFTLNPGEKAGLVGANGAGKSTLFAVLRGELHADAGDFSM CCEECCCHHCCCCCCCCCCCCEEECCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCC PPAWHIAHVSQETPAVDRSALDYTLDGDAALRAIEARIAQASAAHDGAAEADAHAAFADA CCCCEEEECCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECC DGYTAPARAEALLLGLGFTLAQTREPVASFSGGWRMRLNLAQALMCRSDLLLLDEPTNHL CCCCCCHHHHEEEEECCHHHHHHHCHHHHCCCCEEEEHHHHHHHHHHCCEEEEECCCCCC DLDAIVWLEDWLHRYPGTLVIISHDREFLDAVCNVTLHLENRQVKRYGGNYSQFEVLRAQ CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCEEEEECCCHHHHHCCCHHHHHHHHHH QLELQQSAYEKQRKTIAHLQSFVDRFKAKASKAKQAQSRVKALEKMELIAPAHVASPFTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEE EFRTPDSAPNPMLVMEDVRCGYHADGGGEIPIVERVALSIQNGQRIGLLGANGQGKSTLI EEECCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHEECCCCEEEEEECCCCCHHHHH KTLAGTLAPLSGDVRTGRGLTIGYFAQHQLETLREDESALAHLARLAPDTREQELRDFLG HHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC GFNFSGDMATAPIAPFSGGEKARLALALIIWQKPNLLLLDEPTNHLDLETRHALTMALAQ CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHH FEGTLILVSHDRHLLRATTDQFMLVAKHRLQPFDGDLDDYRDWLLQHAAEQRAAAKAASG HCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC SASDADGGAPAVNRKDQKRQEAEARQRLSLLKKPLQARITKIEKEMERLHAQKVELDAFV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE ADPASYAADQKARLTEAIRKLGDVNGRLETLEADWLGAQDELESIG CCCHHHHCCHHHHHHHHHHHHHCCCCCEEEEEHHCCCCHHHHHHCC >Mature Secondary Structure MIRFNQFSLARGTKPLFDATSFTLNPGEKAGLVGANGAGKSTLFAVLRGELHADAGDFSM CCEECCCHHCCCCCCCCCCCCEEECCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCC PPAWHIAHVSQETPAVDRSALDYTLDGDAALRAIEARIAQASAAHDGAAEADAHAAFADA CCCCEEEECCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECC DGYTAPARAEALLLGLGFTLAQTREPVASFSGGWRMRLNLAQALMCRSDLLLLDEPTNHL CCCCCCHHHHEEEEECCHHHHHHHCHHHHCCCCEEEEHHHHHHHHHHCCEEEEECCCCCC DLDAIVWLEDWLHRYPGTLVIISHDREFLDAVCNVTLHLENRQVKRYGGNYSQFEVLRAQ CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCEEEEECCCHHHHHCCCHHHHHHHHHH QLELQQSAYEKQRKTIAHLQSFVDRFKAKASKAKQAQSRVKALEKMELIAPAHVASPFTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEE EFRTPDSAPNPMLVMEDVRCGYHADGGGEIPIVERVALSIQNGQRIGLLGANGQGKSTLI EEECCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHEECCCCEEEEEECCCCCHHHHH KTLAGTLAPLSGDVRTGRGLTIGYFAQHQLETLREDESALAHLARLAPDTREQELRDFLG HHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC GFNFSGDMATAPIAPFSGGEKARLALALIIWQKPNLLLLDEPTNHLDLETRHALTMALAQ CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHH FEGTLILVSHDRHLLRATTDQFMLVAKHRLQPFDGDLDDYRDWLLQHAAEQRAAAKAASG HCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC SASDADGGAPAVNRKDQKRQEAEARQRLSLLKKPLQARITKIEKEMERLHAQKVELDAFV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE ADPASYAADQKARLTEAIRKLGDVNGRLETLEADWLGAQDELESIG CCCHHHHCCHHHHHHHHHHHHHCCCCCEEEEEHHCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]