Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
---|---|
Accession | NC_007651 |
Length | 3,809,201 |
Click here to switch to the map view.
The map label for this gene is blh [H]
Identifier: 83721139
GI number: 83721139
Start: 2570735
End: 2571628
Strand: Reverse
Name: blh [H]
Synonym: BTH_I2282
Alternate gene names: 83721139
Gene position: 2571628-2570735 (Counterclockwise)
Preceding gene: 83721659
Following gene: 83719678
Centisome position: 67.51
GC content: 70.25
Gene sequence:
>894_bases ATGACGGTCGAAGGCTTTTTCGACCCGGCGACCTGCACCATCAGCTATTTGCTGCTCGATTCCGGCAGCGGCGAATGCGC GTTGATCGACAGCGTGCTCGACTACGATCCGAAATCCGGCCGCACGCGCACCGCGAGCGCGGACCAGCTGATCGCGCGCG TCGCGGCACTCGGCGCGCGCGTGCGCTGGCTGCTCGAGACGCACGTGCACGCCGACCATCTGTCGGCCGCGCCGTACCTG AAGGCGCGGGTCGGCGGCGAAATCGCGATCGGCCGCCACGTGACGCGCGTGCAGGACGTGTTCGGCAAGCTGTTCAACGC GGGGCCCTCGTTCGCGCACGACGGCAGCCAGTTCGACCGCCTGCTCGACGACGGCGATACGCTCGCGCTCGGCGCGCTGT CGATTCGCGCGATGCACACGCCCGGCCACACGCCCGCGTGCATGACCTACGTCGTCACCGAAGGGCGCGCGGCGCACGGC GCACCCGGCGCACGAGACGCGGCCGCGTTCGTCGGCGATACGCTGTTCATGCCCGACTACGGCACCGCGCGCTGCGACTT CCCCGGCGGCGACGCGCGCACGCTGTACCGGTCGATCCGCAAGGTGCTGAGCCTGCCGCCAGCGACGCGCCTCTACATGT GCCACGACTATCAGCCGAACGGCCGCGCGGTGCAGTACGCGAGCACCGTCGCCAACGAGCTGCGCGAGAACGTGCACATC CGCGAGGGCGTCACCGAGGACGACTTCGTCGCGATGCGCACCGCGCGCGACGCGACGCTCGACATGCCGGTGCTGATGCT GCCGTCGGTGCAGGTCAACATGCGCGCGGGGCGCCTGCCCGAGCCCGAGGACAACGGCGTGCGCTACCTGAAGATCCCGC TCGACGCGATCTGA
Upstream 100 bases:
>100_bases GGTGATCGGCAATGCTGGCTACTTGGCACGGTTCTTGTTCAAACGATCGCCATCTCGATGAATCGGCTCCAGGAGAAATC TCGTGACAACAGCGCCCACG
Downstream 100 bases:
>100_bases GCGTGCCCGCCCTCCCCAACGACGACACGACACACACAACAGGCCAACCATGGAAATCCGCAAGCTGACCGACACGCTGT CGGTCTCCCCCCAACTCGCC
Product: metallo-beta-lactamase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MTVEGFFDPATCTISYLLLDSGSGECALIDSVLDYDPKSGRTRTASADQLIARVAALGARVRWLLETHVHADHLSAAPYL KARVGGEIAIGRHVTRVQDVFGKLFNAGPSFAHDGSQFDRLLDDGDTLALGALSIRAMHTPGHTPACMTYVVTEGRAAHG APGARDAAAFVGDTLFMPDYGTARCDFPGGDARTLYRSIRKVLSLPPATRLYMCHDYQPNGRAVQYASTVANELRENVHI REGVTEDDFVAMRTARDATLDMPVLMLPSVQVNMRAGRLPEPEDNGVRYLKIPLDAI
Sequences:
>Translated_297_residues MTVEGFFDPATCTISYLLLDSGSGECALIDSVLDYDPKSGRTRTASADQLIARVAALGARVRWLLETHVHADHLSAAPYL KARVGGEIAIGRHVTRVQDVFGKLFNAGPSFAHDGSQFDRLLDDGDTLALGALSIRAMHTPGHTPACMTYVVTEGRAAHG APGARDAAAFVGDTLFMPDYGTARCDFPGGDARTLYRSIRKVLSLPPATRLYMCHDYQPNGRAVQYASTVANELRENVHI REGVTEDDFVAMRTARDATLDMPVLMLPSVQVNMRAGRLPEPEDNGVRYLKIPLDAI >Mature_296_residues TVEGFFDPATCTISYLLLDSGSGECALIDSVLDYDPKSGRTRTASADQLIARVAALGARVRWLLETHVHADHLSAAPYLK ARVGGEIAIGRHVTRVQDVFGKLFNAGPSFAHDGSQFDRLLDDGDTLALGALSIRAMHTPGHTPACMTYVVTEGRAAHGA PGARDAAAFVGDTLFMPDYGTARCDFPGGDARTLYRSIRKVLSLPPATRLYMCHDYQPNGRAVQYASTVANELRENVHIR EGVTEDDFVAMRTARDATLDMPVLMLPSVQVNMRAGRLPEPEDNGVRYLKIPLDAI
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=273, Percent_Identity=31.5018315018315, Blast_Score=109, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17538952, Length=269, Percent_Identity=28.2527881040892, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI221330176, Length=280, Percent_Identity=28.9285714285714, Blast_Score=108, Evalue=6e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 32215; Mature: 32084
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVEGFFDPATCTISYLLLDSGSGECALIDSVLDYDPKSGRTRTASADQLIARVAALGAR CCCCCCCCCHHHEEEEEEEECCCCCEEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH VRWLLETHVHADHLSAAPYLKARVGGEIAIGRHVTRVQDVFGKLFNAGPSFAHDGSQFDR HHHHHHHHCCHHHHCCCCHHHHHCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCCHHHHH LLDDGDTLALGALSIRAMHTPGHTPACMTYVVTEGRAAHGAPGARDAAAFVGDTLFMPDY HHCCCCEEEEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHCCEEECCCC GTARCDFPGGDARTLYRSIRKVLSLPPATRLYMCHDYQPNGRAVQYASTVANELRENVHI CCEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEHHHHHHHHHHHHCCCH REGVTEDDFVAMRTARDATLDMPVLMLPSVQVNMRAGRLPEPEDNGVRYLKIPLDAI HCCCCCCHHEEEECCCCCCCCCCEEECCCEEEEECCCCCCCCCCCCEEEEEEECCCC >Mature Secondary Structure TVEGFFDPATCTISYLLLDSGSGECALIDSVLDYDPKSGRTRTASADQLIARVAALGAR CCCCCCCCHHHEEEEEEEECCCCCEEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH VRWLLETHVHADHLSAAPYLKARVGGEIAIGRHVTRVQDVFGKLFNAGPSFAHDGSQFDR HHHHHHHHCCHHHHCCCCHHHHHCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCCHHHHH LLDDGDTLALGALSIRAMHTPGHTPACMTYVVTEGRAAHGAPGARDAAAFVGDTLFMPDY HHCCCCEEEEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHCCEEECCCC GTARCDFPGGDARTLYRSIRKVLSLPPATRLYMCHDYQPNGRAVQYASTVANELRENVHI CCEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEHHHHHHHHHHHHCCCH REGVTEDDFVAMRTARDATLDMPVLMLPSVQVNMRAGRLPEPEDNGVRYLKIPLDAI HCCCCCCHHEEEECCCCCCCCCCEEECCCEEEEECCCCCCCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]