| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is dfrA [H]
Identifier: 83721102
GI number: 83721102
Start: 1883037
End: 1883696
Strand: Reverse
Name: dfrA [H]
Synonym: BTH_I1674
Alternate gene names: 83721102
Gene position: 1883696-1883037 (Counterclockwise)
Preceding gene: 83719894
Following gene: 83719689
Centisome position: 49.45
GC content: 70.0
Gene sequence:
>660_bases GTGTGCGCGAAGCGTCGGCGCAGGGCGCATCAAGCGTCGATCGCCGCAAGGCGCGCGAGAACGCGTATTCCGAACCGGCG CGAAGCACGACGCGCGCGGGCGCGTGCGGCGCGATCCGGTAGAATCGTGCCCTTCCGGCATCTTTTTCTTCCCGTCATGA CGACGCTGACCCTGATCGTCGCGCGCGCCCGCAATGGCGTGATCGGCCGCGACAACCGGCTTCCGTGGAAACTCCCCGAG GACCTCGCGTTCTTCAAGCGCACGACGATGGGCGCGCCGATCGTGATGGGCCGCAAGACGCACGAGTCGATCGGCCGGCC GCTGCCCGGCCGCCGCAACATCGTCGTCACGCGCGACGCCGCGCGACGCTTCGACGGCTGCGACACGGCCACGTCGCTCG GCGACGCGCTCGCGCTCGCCGAGCGCGACGGCGCGGCCGAAGCGTTCCTGATCGGCGGCGCGCAACTGTACGCGGAGGGC CTGCGCCATGCGGACAAGCTGATCGTCACCGAGATCGATCAGGATTTCGAAGGCGACGCGTCGTTTCCCGCGCCCGATCC CGCGCAGTGGGAAGCCGTGTCGCGCGATGCGCATCGCGCGGCCCCGCCGAACGATTTCGCATACGCGTTCGTCGTCTACC GTCGCAAGCGCGCCGCCTGA
Upstream 100 bases:
>100_bases GATGGTGTCGCACGGCCTGCGCGAGTTGTCATGGGGCACGCATCGCACGGGCGCGAGCGATCCGGACGACGAAGCCGAGC CCACGTGAAGTGCGGGCGGC
Downstream 100 bases:
>100_bases CGGACGCGAGCCCGCGCGCGATATCGCGGGCTCCCGCGCGACGACACAAAAAAGGCGCCGCTCGCCGCGGCGCCTCTTGC TTTTGCGCGATCGAAACGAT
Product: dihydrofolate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MCAKRRRRAHQASIAARRARTRIPNRREARRARARAARSGRIVPFRHLFLPVMTTLTLIVARARNGVIGRDNRLPWKLPE DLAFFKRTTMGAPIVMGRKTHESIGRPLPGRRNIVVTRDAARRFDGCDTATSLGDALALAERDGAAEAFLIGGAQLYAEG LRHADKLIVTEIDQDFEGDASFPAPDPAQWEAVSRDAHRAAPPNDFAYAFVVYRRKRAA
Sequences:
>Translated_219_residues MCAKRRRRAHQASIAARRARTRIPNRREARRARARAARSGRIVPFRHLFLPVMTTLTLIVARARNGVIGRDNRLPWKLPE DLAFFKRTTMGAPIVMGRKTHESIGRPLPGRRNIVVTRDAARRFDGCDTATSLGDALALAERDGAAEAFLIGGAQLYAEG LRHADKLIVTEIDQDFEGDASFPAPDPAQWEAVSRDAHRAAPPNDFAYAFVVYRRKRAA >Mature_219_residues MCAKRRRRAHQASIAARRARTRIPNRREARRARARAARSGRIVPFRHLFLPVMTTLTLIVARARNGVIGRDNRLPWKLPE DLAFFKRTTMGAPIVMGRKTHESIGRPLPGRRNIVVTRDAARRFDGCDTATSLGDALALAERDGAAEAFLIGGAQLYAEG LRHADKLIVTEIDQDFEGDASFPAPDPAQWEAVSRDAHRAAPPNDFAYAFVVYRRKRAA
Specific function: Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis [H]
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DHFR (dihydrofolate reductase) domain [H]
Homologues:
Organism=Homo sapiens, GI4503323, Length=185, Percent_Identity=32.972972972973, Blast_Score=81, Evalue=7e-16, Organism=Homo sapiens, GI28827793, Length=156, Percent_Identity=35.2564102564103, Blast_Score=70, Evalue=1e-12, Organism=Escherichia coli, GI1786233, Length=161, Percent_Identity=41.6149068322981, Blast_Score=130, Evalue=6e-32, Organism=Caenorhabditis elegans, GI17505899, Length=184, Percent_Identity=30.4347826086957, Blast_Score=77, Evalue=8e-15, Organism=Drosophila melanogaster, GI116008026, Length=150, Percent_Identity=34.6666666666667, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24647458, Length=150, Percent_Identity=34.6666666666667, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 10,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012259 - InterPro: IPR017925 - InterPro: IPR001796 [H]
Pfam domain/function: PF00186 DHFR_1 [H]
EC number: =1.5.1.3 [H]
Molecular weight: Translated: 24446; Mature: 24446
Theoretical pI: Translated: 11.92; Mature: 11.92
Prosite motif: PS00075 DHFR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCAKRRRRAHQASIAARRARTRIPNRREARRARARAARSGRIVPFRHLFLPVMTTLTLIV CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH ARARNGVIGRDNRLPWKLPEDLAFFKRTTMGAPIVMGRKTHESIGRPLPGRRNIVVTRDA HHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCHHHHCCCCCCCCCEEEECHH ARRFDGCDTATSLGDALALAERDGAAEAFLIGGAQLYAEGLRHADKLIVTEIDQDFEGDA HHHCCCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHEEECCCCCCCCCC SFPAPDPAQWEAVSRDAHRAAPPNDFAYAFVVYRRKRAA CCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MCAKRRRRAHQASIAARRARTRIPNRREARRARARAARSGRIVPFRHLFLPVMTTLTLIV CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH ARARNGVIGRDNRLPWKLPEDLAFFKRTTMGAPIVMGRKTHESIGRPLPGRRNIVVTRDA HHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCHHHHCCCCCCCCCEEEECHH ARRFDGCDTATSLGDALALAERDGAAEAFLIGGAQLYAEGLRHADKLIVTEIDQDFEGDA HHHCCCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHEEECCCCCCCCCC SFPAPDPAQWEAVSRDAHRAAPPNDFAYAFVVYRRKRAA CCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2840350; 9384377 [H]