| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is yjgA [C]
Identifier: 83719689
GI number: 83719689
Start: 1880815
End: 1881432
Strand: Reverse
Name: yjgA [C]
Synonym: BTH_I1672
Alternate gene names: 83719689
Gene position: 1881432-1880815 (Counterclockwise)
Preceding gene: 83721102
Following gene: 83720171
Centisome position: 49.39
GC content: 68.93
Gene sequence:
>618_bases ATGCCGCCCATGACACGCAAAACCCGCATCCAACCGATCGAACACGCCGGCGAAGACGCCGACCACGGCTACGATCGCCC CAGCAAGTCCCAGTTGAAGCGCGACATGCACGCGCTGCAGGAACTGGGCGCCGCCCTCGTCGAGCTGCCGAAGGACGCGT TCAAGCGCATGCCGATGCCGGAAGATCTCGCCGACGCCGTGCGCGAGGCGCGCCGCATCACCGATCACGAAGGCAAGCGC CGCCAGATTCAGTACGTCGGGCGCGTGATGCGCTCGCTCACCGCAGACGAGACGGCCGCGCTGCGCGCGGCGCTCGATGC GCAGCGCGGCGTGAACAAGGCCGAGACGGCGCGCCTGCACTGGATCGAGCGCACGCGCGAGCAACTGCTCGCGAACGACG AAGCGCTGACCGCGTTCATCCGCGAGCATCCGTCGGCCGACGTGCAGGAAGGCCGCACGCTGATCCGCAACGCACGCCGG GAAGCGCAGCAAGGCAAGCCGCCGCGCTACTTCCGCGAGCTGTTCCAGTGGATCAAGTCGGCGAGCGGCGCGGCGGGCGA CGCAAGCGACGCGCCCGAGCACTCACCGGAGTCCGACGATGACGACGACGAAGCGTAA
Upstream 100 bases:
>100_bases GTCGCCCGCATGTTTCGAAATGTGCGTATCCCGCGATCATAGCAAGGTCCGGCGCGGGCGACGCGCGCCCGCGCGGCCGC GCGGTGTCCGGCGCGATACA
Downstream 100 bases:
>100_bases CCGCCCCGACGAACTCGTGATCGGCCTCGTGTCGATCAGCGACCGCGCAAGCAGCGGCGTCTACGAGGACAAGGGCATTC CGGCGCTCTCCGAATGGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MPPMTRKTRIQPIEHAGEDADHGYDRPSKSQLKRDMHALQELGAALVELPKDAFKRMPMPEDLADAVREARRITDHEGKR RQIQYVGRVMRSLTADETAALRAALDAQRGVNKAETARLHWIERTREQLLANDEALTAFIREHPSADVQEGRTLIRNARR EAQQGKPPRYFRELFQWIKSASGAAGDASDAPEHSPESDDDDDEA
Sequences:
>Translated_205_residues MPPMTRKTRIQPIEHAGEDADHGYDRPSKSQLKRDMHALQELGAALVELPKDAFKRMPMPEDLADAVREARRITDHEGKR RQIQYVGRVMRSLTADETAALRAALDAQRGVNKAETARLHWIERTREQLLANDEALTAFIREHPSADVQEGRTLIRNARR EAQQGKPPRYFRELFQWIKSASGAAGDASDAPEHSPESDDDDDEA >Mature_204_residues PPMTRKTRIQPIEHAGEDADHGYDRPSKSQLKRDMHALQELGAALVELPKDAFKRMPMPEDLADAVREARRITDHEGKRR QIQYVGRVMRSLTADETAALRAALDAQRGVNKAETARLHWIERTREQLLANDEALTAFIREHPSADVQEGRTLIRNARRE AQQGKPPRYFRELFQWIKSASGAAGDASDAPEHSPESDDDDDEA
Specific function: Unknown
COG id: COG3028
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0307 family [H]
Homologues:
Organism=Escherichia coli, GI1790681, Length=160, Percent_Identity=36.25, Blast_Score=102, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023153 - InterPro: IPR006839 [H]
Pfam domain/function: PF04751 DUF615 [H]
EC number: NA
Molecular weight: Translated: 23198; Mature: 23067
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPMTRKTRIQPIEHAGEDADHGYDRPSKSQLKRDMHALQELGAALVELPKDAFKRMPMP CCCCCCCHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCC EDLADAVREARRITDHEGKRRQIQYVGRVMRSLTADETAALRAALDAQRGVNKAETARLH HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH WIERTREQLLANDEALTAFIREHPSADVQEGRTLIRNARREAQQGKPPRYFRELFQWIKS HHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH ASGAAGDASDAPEHSPESDDDDDEA CCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PPMTRKTRIQPIEHAGEDADHGYDRPSKSQLKRDMHALQELGAALVELPKDAFKRMPMP CCCCCCHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCC EDLADAVREARRITDHEGKRRQIQYVGRVMRSLTADETAALRAALDAQRGVNKAETARLH HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH WIERTREQLLANDEALTAFIREHPSADVQEGRTLIRNARREAQQGKPPRYFRELFQWIKS HHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH ASGAAGDASDAPEHSPESDDDDDEA CCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA