Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is 83720924
Identifier: 83720924
GI number: 83720924
Start: 1985350
End: 1985904
Strand: Direct
Name: 83720924
Synonym: BTH_I1770
Alternate gene names: NA
Gene position: 1985350-1985904 (Clockwise)
Preceding gene: 83719106
Following gene: 83720040
Centisome position: 52.12
GC content: 65.95
Gene sequence:
>555_bases ATGTTCCGATTCCGTATCCTTCCTGTCGCGATGCTCGGCGCGGCGCTCGCGCTCGCCGGTTGCGACGATCAGCAAAGCGA GCAGGCCGTGCAGCGATTCAAGGATTTCTTCAACGCGATCAAACCCGCGCCGATGTTCCTCAAGGGCCTCACGCCCGGCG TGACGACCGAGGCGGAGATCCGCAGCCAGATGGGGCGGCCCGAGACGGAGCGCGTCTACACCGACGGCTCGAAGCGGCTT GAATACCCGCGCGGCCCGATGGGCAACGAGACGTACATGGTCGACCTCGACGCGAATGGCCGCTTCGTCGCCGCGACGCA GGTGCTGACGGCCGCGAATTTCGCGAAGATCCGCCCCGGCATGACGCAGGACGAGGTGCGGCGCCTGCTCGGCAAGCCGA CCGAGGTCGCGCGTTATCCGCTCAAGCCGGAGACGGTGTGGAGCTGGCGCTGGCTCGAGGACGGCGTCAATCAGGACGCG TTCTTCAACGTCCATTTCGGGCCGGATGGGCTCGTCTACACGACTTCGCGCTCCGATATCCTGAAGGGCCGCTGA
Upstream 100 bases:
>100_bases GCCGCCTCGAATCGCGCTTTGCGCGTGCGACGGCCGCGGTGCGGTATGCTTGCGCGCGTGTTCGATGTCGCGCGCGTAGC CGCGCCGTTTTCCGATGACG
Downstream 100 bases:
>100_bases GCGCCGCCGCCTGTCGCTACTCGCCGTCGCTTGCCTGGTTGGCCGCTGCGCCGGCTCTATCGCAAAAGCGACCCGAAACT TGCAAAAAAGCGGCGGGCGG
Product: lipoprotein
Products: NA
Alternate protein names: Lipoprotein Transmembrane; Transmembrane Protein
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MFRFRILPVAMLGAALALAGCDDQQSEQAVQRFKDFFNAIKPAPMFLKGLTPGVTTEAEIRSQMGRPETERVYTDGSKRL EYPRGPMGNETYMVDLDANGRFVAATQVLTAANFAKIRPGMTQDEVRRLLGKPTEVARYPLKPETVWSWRWLEDGVNQDA FFNVHFGPDGLVYTTSRSDILKGR
Sequences:
>Translated_184_residues MFRFRILPVAMLGAALALAGCDDQQSEQAVQRFKDFFNAIKPAPMFLKGLTPGVTTEAEIRSQMGRPETERVYTDGSKRL EYPRGPMGNETYMVDLDANGRFVAATQVLTAANFAKIRPGMTQDEVRRLLGKPTEVARYPLKPETVWSWRWLEDGVNQDA FFNVHFGPDGLVYTTSRSDILKGR >Mature_184_residues MFRFRILPVAMLGAALALAGCDDQQSEQAVQRFKDFFNAIKPAPMFLKGLTPGVTTEAEIRSQMGRPETERVYTDGSKRL EYPRGPMGNETYMVDLDANGRFVAATQVLTAANFAKIRPGMTQDEVRRLLGKPTEVARYPLKPETVWSWRWLEDGVNQDA FFNVHFGPDGLVYTTSRSDILKGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20709; Mature: 20709
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRFRILPVAMLGAALALAGCDDQQSEQAVQRFKDFFNAIKPAPMFLKGLTPGVTTEAEI CCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHH RSQMGRPETERVYTDGSKRLEYPRGPMGNETYMVDLDANGRFVAATQVLTAANFAKIRPG HHHCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHCCCC MTQDEVRRLLGKPTEVARYPLKPETVWSWRWLEDGVNQDAFFNVHFGPDGLVYTTSRSDI CCHHHHHHHHCCCHHHHCCCCCCCCEEEEEHHHCCCCCCEEEEEEECCCCEEEECCCCCC LKGR CCCC >Mature Secondary Structure MFRFRILPVAMLGAALALAGCDDQQSEQAVQRFKDFFNAIKPAPMFLKGLTPGVTTEAEI CCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHH RSQMGRPETERVYTDGSKRLEYPRGPMGNETYMVDLDANGRFVAATQVLTAANFAKIRPG HHHCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHCCCC MTQDEVRRLLGKPTEVARYPLKPETVWSWRWLEDGVNQDAFFNVHFGPDGLVYTTSRSDI CCHHHHHHHHCCCHHHHCCCCCCCCEEEEEHHHCCCCCCEEEEEEECCCCEEEECCCCCC LKGR CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA