Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is hisQ [H]
Identifier: 83720040
GI number: 83720040
Start: 1986207
End: 1986896
Strand: Direct
Name: hisQ [H]
Synonym: BTH_I1771
Alternate gene names: 83720040
Gene position: 1986207-1986896 (Clockwise)
Preceding gene: 83720924
Following gene: 83718785
Centisome position: 52.14
GC content: 63.62
Gene sequence:
>690_bases GTGTTTCTATACGGCTTTGGTCCGCTCATCTGGGCGGGCACCGTGCAGACGATCGAGCTGTCGGTGCTGTCGCTCGCGGC GGCGGTGCTGCTCGGCCTCGCCGGTGCAGTCGCGAAGCTCTCGCGCAATCGCGTGTTGCGCGCGGGCGCGACGGCCTACA CGACGCTCATCCGCTCGGTGCCCGATCTCGTGCTGATGCTGCTGCTGTTCTACAGCATCCAGATCTGGCTCAACCAGCTC ACCGACCTGATGAACTGGGAGCAGATCGACATCGATCCGTTCGTCGCCGGCGTGCTCACGCTGGGGTTCATCTATGGCGC GTATTTCACCGAGACGTTTCGCGGCGCGTTCCTCGCGGTGCCGCGCGGACAGCTCGAGGCGGGCAGCGCGTACGGGATGA GCGGGATGCGCGTGTTCGCGCGGATCATGTTTCCGCAGATGATGCGCTTCGCGCTGCCCGGCATCGGCAACAACTGGCAG GTGCTCGTGAAGGCGACGGCGCTCGTGTCGATCATCGGTCTCGCCGACGTCGTGAAAGCCGCGCAGGACGCGGGCAAAAG CACGTTCAACATGTTCTTCTTCATTCTCGTCGCGGCGCTCGTCTATCTGGCGATCACGACGGCCTCCAATCTCGTGCTCA AGCAGCTCGAGAAGCGTTATTCCATCGGCGTGAGGCACGCGGAACTATGA
Upstream 100 bases:
>100_bases CGCCACCGCCATTTGAGCGGTTTTTTTTTGCTTGCGACTATCCGCGTCAAACCGGCGCGACCGTGCGTGCGCCATTCCCA TCACGATCCCGGAGACAAGC
Downstream 100 bases:
>100_bases TCGAGATCCTGCAGGAATTCGGGCGCGCGTTCTTGTATTGGGACGGCCAGCGCATGTCGGGGCTCGCCGTCACGCTGTGG CTGCTCGTCGCGTCGCTCGG
Product: amino acid ABC transporter permease
Products: ADP; phosphate; L-histidine [Cytoplasm]; ADP; L-ornithine [Cytoplasm]; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MFLYGFGPLIWAGTVQTIELSVLSLAAAVLLGLAGAVAKLSRNRVLRAGATAYTTLIRSVPDLVLMLLLFYSIQIWLNQL TDLMNWEQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLAVPRGQLEAGSAYGMSGMRVFARIMFPQMMRFALPGIGNNWQ VLVKATALVSIIGLADVVKAAQDAGKSTFNMFFFILVAALVYLAITTASNLVLKQLEKRYSIGVRHAEL
Sequences:
>Translated_229_residues MFLYGFGPLIWAGTVQTIELSVLSLAAAVLLGLAGAVAKLSRNRVLRAGATAYTTLIRSVPDLVLMLLLFYSIQIWLNQL TDLMNWEQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLAVPRGQLEAGSAYGMSGMRVFARIMFPQMMRFALPGIGNNWQ VLVKATALVSIIGLADVVKAAQDAGKSTFNMFFFILVAALVYLAITTASNLVLKQLEKRYSIGVRHAEL >Mature_229_residues MFLYGFGPLIWAGTVQTIELSVLSLAAAVLLGLAGAVAKLSRNRVLRAGATAYTTLIRSVPDLVLMLLLFYSIQIWLNQL TDLMNWEQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLAVPRGQLEAGSAYGMSGMRVFARIMFPQMMRFALPGIGNNWQ VLVKATALVSIIGLADVVKAAQDAGKSTFNMFFFILVAALVYLAITTASNLVLKQLEKRYSIGVRHAEL
Specific function: Part of the binding-protein-dependent transport system for histidine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4215
COG function: function code E; ABC-type arginine transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788646, Length=227, Percent_Identity=61.2334801762115, Blast_Score=278, Evalue=2e-76, Organism=Escherichia coli, GI1787087, Length=216, Percent_Identity=35.1851851851852, Blast_Score=135, Evalue=2e-33, Organism=Escherichia coli, GI1787030, Length=215, Percent_Identity=30.6976744186047, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1788645, Length=221, Percent_Identity=30.7692307692308, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1788226, Length=221, Percent_Identity=27.1493212669683, Blast_Score=85, Evalue=3e-18, Organism=Escherichia coli, GI1786873, Length=213, Percent_Identity=29.1079812206573, Blast_Score=77, Evalue=7e-16, Organism=Escherichia coli, GI1786874, Length=181, Percent_Identity=30.939226519337, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI87082239, Length=220, Percent_Identity=27.7272727272727, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1787086, Length=221, Percent_Identity=26.2443438914027, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 25026; Mature: 25026
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLYGFGPLIWAGTVQTIELSVLSLAAAVLLGLAGAVAKLSRNRVLRAGATAYTTLIRSV CCEEECCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH PDLVLMLLLFYSIQIWLNQLTDLMNWEQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLAV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEC PRGQLEAGSAYGMSGMRVFARIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH AQDAGKSTFNMFFFILVAALVYLAITTASNLVLKQLEKRYSIGVRHAEL HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MFLYGFGPLIWAGTVQTIELSVLSLAAAVLLGLAGAVAKLSRNRVLRAGATAYTTLIRSV CCEEECCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH PDLVLMLLLFYSIQIWLNQLTDLMNWEQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLAV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEC PRGQLEAGSAYGMSGMRVFARIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH AQDAGKSTFNMFFFILVAALVYLAITTASNLVLKQLEKRYSIGVRHAEL HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-histidine [Periplasm]; H2O; ATP; L-ornithine [Periplasm]; L-arginine [Periplasm]; L-lysine [Periplasm] [C]
Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [P
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]