Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is purH [H]
Identifier: 83720913
GI number: 83720913
Start: 1395871
End: 1397436
Strand: Reverse
Name: purH [H]
Synonym: BTH_I1250
Alternate gene names: 83720913
Gene position: 1397436-1395871 (Counterclockwise)
Preceding gene: 83721187
Following gene: 161723182
Centisome position: 36.69
GC content: 66.09
Gene sequence:
>1566_bases ATGATCAAGCAAGCGCTCATTTCCGTTTCCGACAAGACCGGCATCGTCGACTTCGCGAAAGCGCTGTCCGGGCTCGGCGT CAAGCTGCTGTCGACGGGCGGCACCGCGAAACTGCTCGCCGACGCGGGCCTGCCCGTCACCGAAGTGGCCGACTACACCG GCTTCCCGGAGATGCTCGATGGACGCGTGAAAACGCTGCACCCGAAGGTGCACGGCGGCATCCTGGCGCGCCGCGACCTG CCCGAGCACATGCAGGCACTCGAAGCGCACGGGATTCCGACGATCGACCTGCTCGTCGTGAACCTGTATCCGTTCGTCCA GACGATCGCGAAGGACGACTGCACGCTTGCCGACGCGATCGAGAACATCGACATCGGCGGCCCGACGATGCTGCGCTCGG CGGCGAAGAACCACCGCGACGTGACGGTCGTCGTCGATCCGGCCGATTACGCGGTCGTGCTCGACGAGATGAAGGCGAAC GGCAACACGGTCGGCTACAAGACGAATTTCCGTCTCGCGACCAAGGTGTTCGCGCACACCGCGCAGTACGACGGCGCGAT CACGAACTACCTGACGAGCCTCGGCGACGATCTGCAGCACGGCTCGCGCAACGCGTACCCGGCGACGCTGAACCTCGCAT TCGACAAGGTGCAGGACCTGCGCTACGGCGAGAACCCGCACCAGAGCGCGGCGTTCTATCGCGACGTCGCAACGCCCGCC GGCGCGCTCGCGAACTACCGCCAGTTGCAAGGCAAGGAACTGTCTTACAACAACATCGCTGATTCGGACGCCGCGTGGGA ATGCGTGAAGACGTTCGACGCGCCCGCGTGCGTGATCATCAAGCACGCGAATCCGTGCGGCGTCGCGGTGGGCGCGGATG CGGGCGAAGCGTACGCGAAGGCGTTCCAGACCGATCCGACCTCCGCGTTCGGCGGCATCATCGCGTTCAACCGCGAAGTC GACGAAGTCGCGGCTCAAGCGGTCGCGAAGCAGTTCGTCGAAGTGCTGATCGCTCCGTCGTTCTCGGAGGCGGCGAAGCA GGTGTTCGCGGCAAAGCAGAATGTGCGCCTGCTCGAGATCGCGCTGGGCGAAGGCCATAACGCGTTCGACCTGAAGCGCG TCGGCGGCGGCCTGCTCGTGCAATCGCTCGATTCGAAGAACGTGCAGCCGCGCGAGCTGCGCGTCGTCACGAAGCGCCAC CCGACGCCGAAGGAGATGGATGACCTTCTCTTCGCGTGGCGCGTCGCGAAGTACGTGAAGTCGAACGCGATCGTGTTCTG CGGCAACGGGATGACGCTCGGCGTCGGCGCGGGCCAGATGAGCCGCGTCGATTCCGCCCGCATCGCGAGCATCAAGGCGC AGAACGCCGGCCTCACGCTGGCGGGGTCCGCCGTCGCATCGGACGCGTTCTTTCCGTTCCGCGACGGCCTCGACGTCGTC GTCGCGGCGGGCGCAACCTGCGTGATCCAGCCGGGCGGCTCGGTGCGCGACGACGAGGTGATCGCCGCCGCCGACGAGCA CAACATCGCGATGGTGATGACGGGCGTGCGCCACTTCCGTCACTGA
Upstream 100 bases:
>100_bases TCGGCATCAATCGCAACACGCTGCGCAAGAAGCTGCAGCAGCACGGCCTGCTGTAGGCGGCCGCCCCGTCCCCGTTTTCC TGGCTATTGGTGGTTCCATC
Downstream 100 bases:
>100_bases TTCGCACGACGCATCGTTTTCGGCAAAACCCGGCGGTCGCTCACCGCCGGGTTTTTCATCGGCCGAGCGGCGGCGATGCG TCATGCGGCGATCGTTTGCC
Product: bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Products: NA
Alternate protein names: Phosphoribosylaminoimidazolecarboxamide formyltransferase; AICAR transformylase; IMP cyclohydrolase; ATIC; IMP synthase; Inosinicase [H]
Number of amino acids: Translated: 521; Mature: 521
Protein sequence:
>521_residues MIKQALISVSDKTGIVDFAKALSGLGVKLLSTGGTAKLLADAGLPVTEVADYTGFPEMLDGRVKTLHPKVHGGILARRDL PEHMQALEAHGIPTIDLLVVNLYPFVQTIAKDDCTLADAIENIDIGGPTMLRSAAKNHRDVTVVVDPADYAVVLDEMKAN GNTVGYKTNFRLATKVFAHTAQYDGAITNYLTSLGDDLQHGSRNAYPATLNLAFDKVQDLRYGENPHQSAAFYRDVATPA GALANYRQLQGKELSYNNIADSDAAWECVKTFDAPACVIIKHANPCGVAVGADAGEAYAKAFQTDPTSAFGGIIAFNREV DEVAAQAVAKQFVEVLIAPSFSEAAKQVFAAKQNVRLLEIALGEGHNAFDLKRVGGGLLVQSLDSKNVQPRELRVVTKRH PTPKEMDDLLFAWRVAKYVKSNAIVFCGNGMTLGVGAGQMSRVDSARIASIKAQNAGLTLAGSAVASDAFFPFRDGLDVV VAAGATCVIQPGGSVRDDEVIAAADEHNIAMVMTGVRHFRH
Sequences:
>Translated_521_residues MIKQALISVSDKTGIVDFAKALSGLGVKLLSTGGTAKLLADAGLPVTEVADYTGFPEMLDGRVKTLHPKVHGGILARRDL PEHMQALEAHGIPTIDLLVVNLYPFVQTIAKDDCTLADAIENIDIGGPTMLRSAAKNHRDVTVVVDPADYAVVLDEMKAN GNTVGYKTNFRLATKVFAHTAQYDGAITNYLTSLGDDLQHGSRNAYPATLNLAFDKVQDLRYGENPHQSAAFYRDVATPA GALANYRQLQGKELSYNNIADSDAAWECVKTFDAPACVIIKHANPCGVAVGADAGEAYAKAFQTDPTSAFGGIIAFNREV DEVAAQAVAKQFVEVLIAPSFSEAAKQVFAAKQNVRLLEIALGEGHNAFDLKRVGGGLLVQSLDSKNVQPRELRVVTKRH PTPKEMDDLLFAWRVAKYVKSNAIVFCGNGMTLGVGAGQMSRVDSARIASIKAQNAGLTLAGSAVASDAFFPFRDGLDVV VAAGATCVIQPGGSVRDDEVIAAADEHNIAMVMTGVRHFRH >Mature_521_residues MIKQALISVSDKTGIVDFAKALSGLGVKLLSTGGTAKLLADAGLPVTEVADYTGFPEMLDGRVKTLHPKVHGGILARRDL PEHMQALEAHGIPTIDLLVVNLYPFVQTIAKDDCTLADAIENIDIGGPTMLRSAAKNHRDVTVVVDPADYAVVLDEMKAN GNTVGYKTNFRLATKVFAHTAQYDGAITNYLTSLGDDLQHGSRNAYPATLNLAFDKVQDLRYGENPHQSAAFYRDVATPA GALANYRQLQGKELSYNNIADSDAAWECVKTFDAPACVIIKHANPCGVAVGADAGEAYAKAFQTDPTSAFGGIIAFNREV DEVAAQAVAKQFVEVLIAPSFSEAAKQVFAAKQNVRLLEIALGEGHNAFDLKRVGGGLLVQSLDSKNVQPRELRVVTKRH PTPKEMDDLLFAWRVAKYVKSNAIVFCGNGMTLGVGAGQMSRVDSARIASIKAQNAGLTLAGSAVASDAFFPFRDGLDVV VAAGATCVIQPGGSVRDDEVIAAADEHNIAMVMTGVRHFRH
Specific function: De novo purine biosynthesis; ninth step. De novo purine biosynthesis; tenth step. [C]
COG id: COG0138
COG function: function code F; AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purH family [H]
Homologues:
Organism=Homo sapiens, GI20127454, Length=482, Percent_Identity=37.551867219917, Blast_Score=275, Evalue=8e-74, Organism=Escherichia coli, GI1790439, Length=525, Percent_Identity=62.2857142857143, Blast_Score=653, Evalue=0.0, Organism=Caenorhabditis elegans, GI71985564, Length=612, Percent_Identity=32.843137254902, Blast_Score=291, Evalue=7e-79, Organism=Caenorhabditis elegans, GI71985574, Length=318, Percent_Identity=25.7861635220126, Blast_Score=89, Evalue=5e-18, Organism=Caenorhabditis elegans, GI71985556, Length=130, Percent_Identity=33.8461538461538, Blast_Score=74, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6323768, Length=480, Percent_Identity=36.0416666666667, Blast_Score=263, Evalue=5e-71, Organism=Saccharomyces cerevisiae, GI6323056, Length=489, Percent_Identity=35.7873210633947, Blast_Score=259, Evalue=7e-70, Organism=Drosophila melanogaster, GI24649832, Length=486, Percent_Identity=38.2716049382716, Blast_Score=276, Evalue=3e-74,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002695 - InterPro: IPR013982 - InterPro: IPR016193 - InterPro: IPR011607 [H]
Pfam domain/function: PF01808 AICARFT_IMPCHas; PF02142 MGS [H]
EC number: =2.1.2.3; =3.5.4.10 [H]
Molecular weight: Translated: 55532; Mature: 55532
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKQALISVSDKTGIVDFAKALSGLGVKLLSTGGTAKLLADAGLPVTEVADYTGFPEMLD CCCHHHEECCCCCCHHHHHHHHHCCCEEEEECCCCEEEHCCCCCCHHHHHHCCCCHHHHC GRVKTLHPKVHGGILARRDLPEHMQALEAHGIPTIDLLVVNLYPFVQTIAKDDCTLADAI CCCEEECCHHHCCEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH ENIDIGGPTMLRSAAKNHRDVTVVVDPADYAVVLDEMKANGNTVGYKTNFRLATKVFAHT HHCCCCCHHHHHHHHCCCCCEEEEECCCCEEEEEEHHCCCCCEEEEEECCHHHHHHHHHH AQYDGAITNYLTSLGDDLQHGSRNAYPATLNLAFDKVQDLRYGENPHQSAAFYRDVATPA HHCCCHHHHHHHHHCHHHHCCCCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHHHCCCH GALANYRQLQGKELSYNNIADSDAAWECVKTFDAPACVIIKHANPCGVAVGADAGEAYAK HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCEEEECCCCHHHHH AFQTDPTSAFGGIIAFNREVDEVAAQAVAKQFVEVLIAPSFSEAAKQVFAAKQNVRLLEI HHCCCCCHHHCCEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEE ALGEGHNAFDLKRVGGGLLVQSLDSKNVQPRELRVVTKRHPTPKEMDDLLFAWRVAKYVK EECCCCCCEEHHHCCCCCEEEECCCCCCCHHHEEEEECCCCCHHHHHHHHHHHHHHHHHH SNAIVFCGNGMTLGVGAGQMSRVDSARIASIKAQNAGLTLAGSAVASDAFFPFRDGLDVV CCEEEEECCCEEEEECCCCHHHCCCHHHEEEEECCCCEEEECCHHHCCCCCCCCCCCEEE VAAGATCVIQPGGSVRDDEVIAAADEHNIAMVMTGVRHFRH EECCCEEEECCCCCCCCCCEEEECCCCCEEEEEHHHHHHCC >Mature Secondary Structure MIKQALISVSDKTGIVDFAKALSGLGVKLLSTGGTAKLLADAGLPVTEVADYTGFPEMLD CCCHHHEECCCCCCHHHHHHHHHCCCEEEEECCCCEEEHCCCCCCHHHHHHCCCCHHHHC GRVKTLHPKVHGGILARRDLPEHMQALEAHGIPTIDLLVVNLYPFVQTIAKDDCTLADAI CCCEEECCHHHCCEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH ENIDIGGPTMLRSAAKNHRDVTVVVDPADYAVVLDEMKANGNTVGYKTNFRLATKVFAHT HHCCCCCHHHHHHHHCCCCCEEEEECCCCEEEEEEHHCCCCCEEEEEECCHHHHHHHHHH AQYDGAITNYLTSLGDDLQHGSRNAYPATLNLAFDKVQDLRYGENPHQSAAFYRDVATPA HHCCCHHHHHHHHHCHHHHCCCCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHHHCCCH GALANYRQLQGKELSYNNIADSDAAWECVKTFDAPACVIIKHANPCGVAVGADAGEAYAK HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCEEEECCCCHHHHH AFQTDPTSAFGGIIAFNREVDEVAAQAVAKQFVEVLIAPSFSEAAKQVFAAKQNVRLLEI HHCCCCCHHHCCEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEE ALGEGHNAFDLKRVGGGLLVQSLDSKNVQPRELRVVTKRHPTPKEMDDLLFAWRVAKYVK EECCCCCCEEHHHCCCCCEEEECCCCCCCHHHEEEEECCCCCHHHHHHHHHHHHHHHHHH SNAIVFCGNGMTLGVGAGQMSRVDSARIASIKAQNAGLTLAGSAVASDAFFPFRDGLDVV CCEEEEECCCEEEEECCCCHHHCCCHHHEEEEECCCCEEEECCHHHCCCCCCCCCCCEEE VAAGATCVIQPGGSVRDDEVIAAADEHNIAMVMTGVRHFRH EECCCEEEECCCCCCCCCCEEEECCCCCEEEEEHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA