| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
Click here to switch to the map view.
The map label for this gene is 83720719
Identifier: 83720719
GI number: 83720719
Start: 2158376
End: 2159674
Strand: Reverse
Name: 83720719
Synonym: BTH_I1912
Alternate gene names: NA
Gene position: 2159674-2158376 (Counterclockwise)
Preceding gene: 83719722
Following gene: 83720287
Centisome position: 56.7
GC content: 67.74
Gene sequence:
>1299_bases ATGCGCAACGCTGACGGTATCGCGCCGCGCGCAACGCTTCGCTCGCGCGTCGCCGCTTGCGCGCTCGCTTGCGCGCTCTC GTGGGCGCCGGCCGGCGACGCACTGTCCGCATCCGCTTCGTCGCAGGCGGGCGGCGAGCCTTATACGTTCGCCGTCTTGT CCGGGGTGATCGCGTCGGCTGACGACGAACCCCGGGCTCGGCGCCTGCTGGATGCGATCGCGCGCGACCGCTCGGTGTCG TTCATCGTCTACGAGGGCAACCTGAAGGGACCGAAGGAAGCCTGCCGCGATCAGTTGTATGAGCAGCGCAACGTGCTGTT CACGGCGTCGCGCGTGCCGCTCGTGCTGCTGCCCGGCCAGTATGACTGGGCCGCTTGCGGCACGCGCGATGCCGGCGCGT ACGATCCCGTCGAGCGGCTCGACTTCCTGCGTCAGAACGTCTTCACCGAGCCGGCGTCGCCCGGCGCGAATCCAATGCCG CTCACGCGCGAAAGCGAAGTGCCGCGCTTTCGCCCATATCGCGAGAACGTTCGCTGGGTCCGCGACGCAACCGTGTTCAT CGGCCTGAACGCGCCGGGGCCGAACAACCGCTACCTGACGGCGGGCGGTCGCAACGGCGAGTTCGAGGATCGCGCCATCG CGAACGCCTTCTGGATCGATCACGCAGCCGAGTACGCGAAGCGCCGCAAGGCGCGCGCGCTCGTGGTCTTTCTCGAAGGC GACCCGCAATTCGATCGCTACGAACGTTCGGAGCGCTTCGGATGGCTGCGTTTCAACCGCCCTCGCGTGCGCGACGGCTT TCGCGAATTCAAGCGAGCGTTGGTGAAGGCCGCGGCGGTCTTTCGCGGCTCGATCGTCGTCGTGCATCCAAGCGGCGAGC CGCTCGCGAACGGGTTCAGGATTGACCGTCCGCTACGAGACGACAAGGGGGATCTGGTCGGCAATCTGACGCGCGTCGCG ATCGCGCCGCATGCGCGTCTAACTCAATGGGTGCGAATCGGCGTGGATTCGGCGAGGCAGCCGATGTTCAACGTGAGCCT GCAAACCGTACCGAGACATCTGCCTCAACCGCCCGCGCTGCCCTTCGTGCCGCATGACGATACGCCGTTGCCCGACATGC CCGAAATCCCGGCGCCGCCGGCGCTGCCCGATTCGAGCGCGAGCGGCGCGATGCCGCCCGACTACGGCGAATGGCATGGC GCGCGCGAAGGTTCATTCGACCACCACGCGCCATCGAGCGCGACACCCGGCGAGACGCAGGGCGTCGCCGCACCGGATTC AATGCAGGGTACGCGCTGA
Upstream 100 bases:
>100_bases CTCGAGCGCCTGCTCGCGCTCGATCCGGACGACCTGAAGCCGCGCGACGCGCTCGACCTGCTCTACGAACTGCGCGCGCT CGCCCGCTCAGGCGCAACGG
Downstream 100 bases:
>100_bases ACCGCTGCCTTCGTTGTCGTCGTCCTCGTCTTCGTCGACGATCTCGAGCCCTTCCGCGCCGTGCGCATGCTCGTGCTCGA TTTCGTCTTCCGTCGCTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MRNADGIAPRATLRSRVAACALACALSWAPAGDALSASASSQAGGEPYTFAVLSGVIASADDEPRARRLLDAIARDRSVS FIVYEGNLKGPKEACRDQLYEQRNVLFTASRVPLVLLPGQYDWAACGTRDAGAYDPVERLDFLRQNVFTEPASPGANPMP LTRESEVPRFRPYRENVRWVRDATVFIGLNAPGPNNRYLTAGGRNGEFEDRAIANAFWIDHAAEYAKRRKARALVVFLEG DPQFDRYERSERFGWLRFNRPRVRDGFREFKRALVKAAAVFRGSIVVVHPSGEPLANGFRIDRPLRDDKGDLVGNLTRVA IAPHARLTQWVRIGVDSARQPMFNVSLQTVPRHLPQPPALPFVPHDDTPLPDMPEIPAPPALPDSSASGAMPPDYGEWHG AREGSFDHHAPSSATPGETQGVAAPDSMQGTR
Sequences:
>Translated_432_residues MRNADGIAPRATLRSRVAACALACALSWAPAGDALSASASSQAGGEPYTFAVLSGVIASADDEPRARRLLDAIARDRSVS FIVYEGNLKGPKEACRDQLYEQRNVLFTASRVPLVLLPGQYDWAACGTRDAGAYDPVERLDFLRQNVFTEPASPGANPMP LTRESEVPRFRPYRENVRWVRDATVFIGLNAPGPNNRYLTAGGRNGEFEDRAIANAFWIDHAAEYAKRRKARALVVFLEG DPQFDRYERSERFGWLRFNRPRVRDGFREFKRALVKAAAVFRGSIVVVHPSGEPLANGFRIDRPLRDDKGDLVGNLTRVA IAPHARLTQWVRIGVDSARQPMFNVSLQTVPRHLPQPPALPFVPHDDTPLPDMPEIPAPPALPDSSASGAMPPDYGEWHG AREGSFDHHAPSSATPGETQGVAAPDSMQGTR >Mature_432_residues MRNADGIAPRATLRSRVAACALACALSWAPAGDALSASASSQAGGEPYTFAVLSGVIASADDEPRARRLLDAIARDRSVS FIVYEGNLKGPKEACRDQLYEQRNVLFTASRVPLVLLPGQYDWAACGTRDAGAYDPVERLDFLRQNVFTEPASPGANPMP LTRESEVPRFRPYRENVRWVRDATVFIGLNAPGPNNRYLTAGGRNGEFEDRAIANAFWIDHAAEYAKRRKARALVVFLEG DPQFDRYERSERFGWLRFNRPRVRDGFREFKRALVKAAAVFRGSIVVVHPSGEPLANGFRIDRPLRDDKGDLVGNLTRVA IAPHARLTQWVRIGVDSARQPMFNVSLQTVPRHLPQPPALPFVPHDDTPLPDMPEIPAPPALPDSSASGAMPPDYGEWHG AREGSFDHHAPSSATPGETQGVAAPDSMQGTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47436; Mature: 47436
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNADGIAPRATLRSRVAACALACALSWAPAGDALSASASSQAGGEPYTFAVLSGVIASA CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC DDEPRARRLLDAIARDRSVSFIVYEGNLKGPKEACRDQLYEQRNVLFTASRVPLVLLPGQ CCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCEEEEECCCCEEEECCC YDWAACGTRDAGAYDPVERLDFLRQNVFTEPASPGANPMPLTRESEVPRFRPYRENVRWV CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCEEE RDATVFIGLNAPGPNNRYLTAGGRNGEFEDRAIANAFWIDHAAEYAKRRKARALVVFLEG EEEEEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC DPQFDRYERSERFGWLRFNRPRVRDGFREFKRALVKAAAVFRGSIVVVHPSGEPLANGFR CCCHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEE IDRPLRDDKGDLVGNLTRVAIAPHARLTQWVRIGVDSARQPMFNVSLQTVPRHLPQPPAL CCCCCCCCCCHHHHCCEEEEECCHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHCCCCCCC PFVPHDDTPLPDMPEIPAPPALPDSSASGAMPPDYGEWHGAREGSFDHHAPSSATPGETQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GVAAPDSMQGTR CCCCCCCCCCCC >Mature Secondary Structure MRNADGIAPRATLRSRVAACALACALSWAPAGDALSASASSQAGGEPYTFAVLSGVIASA CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC DDEPRARRLLDAIARDRSVSFIVYEGNLKGPKEACRDQLYEQRNVLFTASRVPLVLLPGQ CCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCEEEEECCCCEEEECCC YDWAACGTRDAGAYDPVERLDFLRQNVFTEPASPGANPMPLTRESEVPRFRPYRENVRWV CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCEEE RDATVFIGLNAPGPNNRYLTAGGRNGEFEDRAIANAFWIDHAAEYAKRRKARALVVFLEG EEEEEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC DPQFDRYERSERFGWLRFNRPRVRDGFREFKRALVKAAAVFRGSIVVVHPSGEPLANGFR CCCHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEE IDRPLRDDKGDLVGNLTRVAIAPHARLTQWVRIGVDSARQPMFNVSLQTVPRHLPQPPAL CCCCCCCCCCHHHHCCEEEEECCHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHCCCCCCC PFVPHDDTPLPDMPEIPAPPALPDSSASGAMPPDYGEWHGAREGSFDHHAPSSATPGETQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GVAAPDSMQGTR CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA